#include <InnerMultiThreadingJob.hh>

Inheritance diagram for protocols::jd2::InnerMultiThreadingJob:

Public Member Functions
	InnerMultiThreadingJob (core::pose::PoseCOP, std::string const &input_tag, core::Size nstruct_max, utility::vector1< core::sequence::SequenceAlignment > const &alns, utility::vector1< core::pose::Pose > const &templates)
	ctor. Note that it takes only the input tag and max nstruct, pose instantiation is deferred until the pose is needed More...

utility::vector1< core::sequence::SequenceAlignment > const &	alignments () const

utility::vector1< core::pose::Pose > const &	template_poses () const

	~InnerMultiThreadingJob () override

Public Member Functions inherited from protocols::jd2::InnerJob
	InnerJob (std::string const &input_tag, core::Size nstruct_max)
	ctor. Note that it takes only the input tag and max nstruct, pose instantiation is deferred until the pose is needed More...

	InnerJob (core::pose::PoseCOP, std::string const &input_tag, core::Size nstruct_max)
	ctor. Note that it takes only the input tag and max nstruct, pose instantiation is deferred until the pose is needed More...

	~InnerJob () override

InnerJobOP	clone () const
	Return an owning pointer to a copy of this object. More...

bool	operator== (InnerJob const &other) const
	Mutual comparison of this inner job to the other inner job so that if either one thinks it's not the same as the other, then it returns false. Invokes the same() function on both this and other. More...

bool	operator!= (InnerJob const &other) const

virtual bool	same (InnerJob const &other) const
	returns true if this is the same as other; does not call other.same() More...

virtual void	show (std::ostream &out) const

std::string const &	input_tag () const
	return the input tag (a string of space separated PDB filenames) More...

std::string const &	optional_output_name () const
	returns a job name controlled by the mover. Must be turned with the optional_output_name out flag. This flag is typically used in conjuction with a mover More...

void	optional_output_name (std::string output_name)
	sets a job name controlled by the mover More...

core::Size	nstruct_max () const

core::pose::PoseCOP	get_pose () const
	return a COP to the input pose DO NOT USE OUTSIDE OF JD2 NAMESPACE More...

void	set_bad (bool value=true)

bool	bad () const

Private Attributes
utility::vector1< core::sequence::SequenceAlignment > const &	alns_

utility::vector1< core::pose::Pose > const &	template_poses_

Additional Inherited Members
Protected Member Functions inherited from protocols::jd2::InnerJob
void	set_pose (core::pose::PoseCOP pose)
	set the input pose. this function is deliberately heavily protected. Parser uses it to re-load the pose after adding constraints. JobInputter is its primary client (using it to load poses). JobDistributor uses it to set the PoseCOP to NULL when done with the input. More...

Constructor & Destructor Documentation

◆ InnerMultiThreadingJob()

protocols::jd2::InnerMultiThreadingJob::InnerMultiThreadingJob	(	core::pose::PoseCOP	pose,
		std::string const &	input_tag,
		core::Size	nstruct_max,
		utility::vector1< core::sequence::SequenceAlignment > const &	alns,
		utility::vector1< core::pose::Pose > const &	templates
	)

ctor. Note that it takes only the input tag and max nstruct, pose instantiation is deferred until the pose is needed

ctor.

◆ ~InnerMultiThreadingJob()

protocols::jd2::InnerMultiThreadingJob::~InnerMultiThreadingJob ( )

overridedefault

Member Function Documentation

◆ alignments()

utility::vector1< core::sequence::SequenceAlignment > const & protocols::jd2::InnerMultiThreadingJob::alignments ( ) const

References alns_.

◆ template_poses()

utility::vector1< core::pose::Pose > const & protocols::jd2::InnerMultiThreadingJob::template_poses ( ) const

References template_poses_.

Member Data Documentation

◆ alns_

utility::vector1< core::sequence::SequenceAlignment > const& protocols::jd2::InnerMultiThreadingJob::alns_

private

Referenced by alignments().

◆ template_poses_

utility::vector1< core::pose::Pose > const& protocols::jd2::InnerMultiThreadingJob::template_poses_

private

Referenced by template_poses().

The documentation for this class was generated from the following files:

src/protocols/jd2/InnerMultiThreadingJob.hh
src/protocols/jd2/InnerMultiThreadingJob.cc

Public Member Functions

Private Attributes

Additional Inherited Members