core::scoring::power_diagram::PDsphere Class Reference

#include <PowerDiagram.hh>

Inheritance diagram for core::scoring::power_diagram::PDsphere:

Public Member Functions
	PDsphere ()
	~PDsphere () override
Size const &	res () const
Size &	nonconst_res ()
Size const &	atom () const
Size &	nonconst_atom ()
Vector const &	xyz () const
Vector &	nonconst_xyz ()
core::Real const &	rad () const
core::Real &	nonconst_rad ()
core::Real const &	rad2 () const
core::Real &	nonconst_rad2 ()
std::list< PDvertex * > &	vertices ()
utility::vector1< utility::vector1< SAnode > > &	cycles ()

Private Attributes
Size	res_
Size	atom_
core::Real	rad_
core::Real	rad2_
Vector	xyz_
std::list< PDvertex * >	cell_vertices_
utility::vector1< utility::vector1< SAnode > >	cycles_

Constructor & Destructor Documentation

PDsphere()

core::scoring::power_diagram::PDsphere::PDsphere ( )

inlineexplicit

References cell_vertices_, cycles_, and xyz_.

~PDsphere()

core::scoring::power_diagram::PDsphere::~PDsphere ( )

inlineoverride

References cell_vertices_.

Member Function Documentation

atom()

Size const& core::scoring::power_diagram::PDsphere::atom ( ) const

inline

References atom_.

cycles()

utility::vector1< utility::vector1< SAnode > >& core::scoring::power_diagram::PDsphere::cycles ( )

inline

References cycles_.

Referenced by core::scoring::SASAPotential::eval_residue_pair_derivatives(), and core::scoring::power_diagram::PowerDiagram::extract_sasa_for_atom().

nonconst_atom()

Size& core::scoring::power_diagram::PDsphere::nonconst_atom ( )

inline

References atom_.

nonconst_rad()

core::Real& core::scoring::power_diagram::PDsphere::nonconst_rad ( )

inline

References rad_.

nonconst_rad2()

core::Real& core::scoring::power_diagram::PDsphere::nonconst_rad2 ( )

inline

References rad2_.

nonconst_res()

Size& core::scoring::power_diagram::PDsphere::nonconst_res ( )

inline

References res_.

nonconst_xyz()

Vector& core::scoring::power_diagram::PDsphere::nonconst_xyz ( )

inline

References xyz_.

rad()

core::Real const& core::scoring::power_diagram::PDsphere::rad ( ) const

inline

References rad_.

Referenced by core::scoring::power_diagram::get_area_from_cycle(), core::scoring::power_diagram::get_cycles_from_intersections(), core::scoring::power_diagram::get_derivs_from_cycle(), and core::scoring::power_diagram::PowerDiagram::get_intersections_for_atom().

rad2()

core::Real const& core::scoring::power_diagram::PDsphere::rad2 ( ) const

inline

References rad2_.

Referenced by core::scoring::power_diagram::find_intersections(), core::scoring::power_diagram::get_area_from_cycle(), core::scoring::power_diagram::get_cycles_from_intersections(), core::scoring::power_diagram::get_sasa_from_cycles(), core::scoring::power_diagram::power_distance(), and core::scoring::power_diagram::vertex_xyz_from_generators().

res()

Size const& core::scoring::power_diagram::PDsphere::res ( ) const

inline

References res_.

vertices()

std::list< PDvertex * >& core::scoring::power_diagram::PDsphere::vertices ( )

inline

References cell_vertices_.

Referenced by core::scoring::power_diagram::PowerDiagram::get_intersections_for_atom().

xyz()

Vector const& core::scoring::power_diagram::PDsphere::xyz ( ) const

inline

References xyz_.

Referenced by core::scoring::power_diagram::find_intersections(), core::scoring::power_diagram::get_area_from_cycle(), core::scoring::power_diagram::get_cycles_from_intersections(), core::scoring::power_diagram::get_derivs_from_cycle(), core::scoring::power_diagram::PowerDiagram::get_intersections_for_atom(), core::scoring::power_diagram::power_distance(), and core::scoring::power_diagram::vertex_xyz_from_generators().

Member Data Documentation

atom_

Size core::scoring::power_diagram::PDsphere::atom_

private

Referenced by atom(), and nonconst_atom().

cell_vertices_

std::list< PDvertex * > core::scoring::power_diagram::PDsphere::cell_vertices_

private

Referenced by PDsphere(), vertices(), and ~PDsphere().

cycles_

utility::vector1< utility::vector1< SAnode > > core::scoring::power_diagram::PDsphere::cycles_

private

Referenced by cycles(), and PDsphere().

rad2_

core::Real core::scoring::power_diagram::PDsphere::rad2_

private

Referenced by nonconst_rad2(), and rad2().

rad_

core::Real core::scoring::power_diagram::PDsphere::rad_

private

Referenced by nonconst_rad(), and rad().

res_

Size core::scoring::power_diagram::PDsphere::res_

private

Referenced by nonconst_res(), and res().

xyz_

Vector core::scoring::power_diagram::PDsphere::xyz_

private

Referenced by nonconst_xyz(), PDsphere(), and xyz().

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The documentation for this class was generated from the following file:

• src/core/scoring/power_diagram/PowerDiagram.hh