protocols::sewing::data_storage::SmartSewingResidue Class Reference

a minimal container for SEWING residues More...

#include <SmartSewingResidue.hh>

Inheritance diagram for protocols::sewing::data_storage::SmartSewingResidue:

Public Member Functions
	SmartSewingResidue ()
	SmartSewingResidue (SmartSewingResidue const &src)
	~SmartSewingResidue () override
SmartSewingResidueOP	clone () const
void	set_atom_vector (utility::vector1< core::conformation::Atom > new_atom_vector)
utility::vector1< core::conformation::Atom > &	get_atom_vector ()
utility::vector1< core::conformation::Atom > const &	get_const_atom_vector () const
core::conformation::Atom &	get_atom (core::Size atom_number)
void	set_chis (utility::vector1< core::Real > new_chis)
utility::vector1< core::Real >	get_chis () const
void	set_amino_acid_type (std::string new_amino_acid_type)
std::string	get_amino_acid_type () const
void	set_type (PolymericType)
PolymericType	get_type ()
std::string	get_full_type_name () const
void	set_full_type_name (std::string const &type)
void	become (SmartSewingResidueCOP residue_to_become)

Private Attributes
utility::vector1< core::conformation::Atom >	atom_vector_
utility::vector1< core::Real >	chis_
std::string	amino_acid_type_
std::string	full_type_name_
PolymericType	type_

Detailed Description

a minimal container for SEWING residues

Constructor & Destructor Documentation

SmartSewingResidue() [1/2]

protocols::sewing::data_storage::SmartSewingResidue::SmartSewingResidue

(

)

References amino_acid_type_, chis_, and full_type_name_.

SmartSewingResidue() [2/2]

protocols::sewing::data_storage::SmartSewingResidue::SmartSewingResidue

(

SmartSewingResidue const &

src

)

References amino_acid_type_, atom_vector_, chis_, full_type_name_, get_amino_acid_type(), get_chis(), get_const_atom_vector(), and get_full_type_name().

~SmartSewingResidue()

protocols::sewing::data_storage::SmartSewingResidue::~SmartSewingResidue ( )

override

Member Function Documentation

become()

void protocols::sewing::data_storage::SmartSewingResidue::become

(

SmartSewingResidueCOP

residue_to_become

)

References amino_acid_type_, atom_vector_, chis_, full_type_name_, get_atom_vector(), set_amino_acid_type(), set_atom_vector(), set_chis(), and set_full_type_name().

clone()

SmartSewingResidueOP protocols::sewing::data_storage::SmartSewingResidue::clone

(

)

const

get_amino_acid_type()

std::string protocols::sewing::data_storage::SmartSewingResidue::get_amino_acid_type

(

)

const

References amino_acid_type_.

Referenced by SmartSewingResidue().

get_atom()

core::conformation::Atom & protocols::sewing::data_storage::SmartSewingResidue::get_atom

(

core::Size

atom_number

)

References atom_vector_.

get_atom_vector()

utility::vector1< core::conformation::Atom > & protocols::sewing::data_storage::SmartSewingResidue::get_atom_vector

(

)

References atom_vector_.

Referenced by become().

get_chis()

utility::vector1< core::Real > protocols::sewing::data_storage::SmartSewingResidue::get_chis

(

)

const

References chis_.

Referenced by SmartSewingResidue().

get_const_atom_vector()

utility::vector1< core::conformation::Atom > const & protocols::sewing::data_storage::SmartSewingResidue::get_const_atom_vector

(

)

const

References atom_vector_.

Referenced by SmartSewingResidue().

get_full_type_name()

std::string protocols::sewing::data_storage::SmartSewingResidue::get_full_type_name

(

)

const

References full_type_name_.

Referenced by SmartSewingResidue().

get_type()

PolymericType protocols::sewing::data_storage::SmartSewingResidue::get_type

(

)

References type_.

set_amino_acid_type()

void protocols::sewing::data_storage::SmartSewingResidue::set_amino_acid_type

(

std::string

new_amino_acid_type

)

References amino_acid_type_.

Referenced by become().

set_atom_vector()

void protocols::sewing::data_storage::SmartSewingResidue::set_atom_vector

(

utility::vector1< core::conformation::Atom >

new_atom_vector

)

References atom_vector_.

Referenced by become().

set_chis()

void protocols::sewing::data_storage::SmartSewingResidue::set_chis

(

utility::vector1< core::Real >

new_chis

)

References chis_.

Referenced by become().

set_full_type_name()

void protocols::sewing::data_storage::SmartSewingResidue::set_full_type_name

(

std::string const &

type

)

References full_type_name_.

Referenced by become().

set_type()

void protocols::sewing::data_storage::SmartSewingResidue::set_type

(

PolymericType

type

)

References type_.

Member Data Documentation

amino_acid_type_

std::string protocols::sewing::data_storage::SmartSewingResidue::amino_acid_type_

private

Referenced by become(), get_amino_acid_type(), set_amino_acid_type(), and SmartSewingResidue().

atom_vector_

utility::vector1<core::conformation::Atom> protocols::sewing::data_storage::SmartSewingResidue::atom_vector_

private

Referenced by become(), get_atom(), get_atom_vector(), get_const_atom_vector(), set_atom_vector(), and SmartSewingResidue().

chis_

utility::vector1<core::Real> protocols::sewing::data_storage::SmartSewingResidue::chis_

private

Referenced by become(), get_chis(), set_chis(), and SmartSewingResidue().

full_type_name_

std::string protocols::sewing::data_storage::SmartSewingResidue::full_type_name_

private

Referenced by become(), get_full_type_name(), set_full_type_name(), and SmartSewingResidue().

type_

PolymericType protocols::sewing::data_storage::SmartSewingResidue::type_

private

Referenced by get_type(), and set_type().

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The documentation for this class was generated from the following files:

• src/protocols/sewing/data_storage/SmartSewingResidue.hh
• src/protocols/sewing/data_storage/SmartSewingResidue.cc