types.hh File Reference

core::scoring package type declarations More...

#include <core/scoring/DerivVectorPair.hh>
#include <utility/pointer/owning_ptr.hh>
#include <utility/exit.hh>
#include <core/types.hh>
#include <core/chemical/types.hh>
#include <ObjexxFCL/FArray3D.fwd.hh>

Classes
struct	core::scoring::hbonds::HBondDerivs

Namespaces
	core
	A class for reading in the atom type properties.
	core::scoring
	core::scoring::hbonds

Enumerations
enum	core::scoring::hbonds::HBondWeightType {   core::scoring::hbonds::hbw_NONE = 1 , core::scoring::hbonds::hbw_SR_BB , core::scoring::hbonds::hbw_LR_BB , core::scoring::hbonds::hbw_SR_BB_SC ,   core::scoring::hbonds::hbw_LR_BB_SC , core::scoring::hbonds::hbw_SC , core::scoring::hbonds::hbw_MAX = hbw_SC }
enum	core::scoring::hbonds::HBAccChemType {   core::scoring::hbonds::hbacc_NONE = 1 , core::scoring::hbonds::hbacc_PBA , core::scoring::hbonds::hbacc_CXA , core::scoring::hbonds::hbacc_CXL ,   core::scoring::hbonds::hbacc_IMD , core::scoring::hbonds::hbacc_IME , core::scoring::hbonds::hbacc_AHX , core::scoring::hbonds::hbacc_HXL ,   core::scoring::hbonds::hbacc_PCA_DNA , core::scoring::hbonds::hbacc_PES_DNA , core::scoring::hbonds::hbacc_RRI_DNA , core::scoring::hbonds::hbacc_PCA_RNA ,   core::scoring::hbonds::hbacc_PES_RNA , core::scoring::hbonds::hbacc_RRI_RNA , core::scoring::hbonds::hbacc_H2O , core::scoring::hbonds::hbacc_GENERIC_SP2BB ,   core::scoring::hbonds::hbacc_GENERIC_SP2SC , core::scoring::hbonds::hbacc_GENERIC_SP3BB , core::scoring::hbonds::hbacc_GENERIC_SP3SC , core::scoring::hbonds::hbacc_GENERIC_RINGBB ,   core::scoring::hbonds::hbacc_GENERIC_RINGSC , core::scoring::hbonds::hbacc_MAX = hbacc_GENERIC_RINGSC }
enum	core::scoring::hbonds::HBDonChemType {   core::scoring::hbonds::hbdon_NONE = 1 , core::scoring::hbonds::hbdon_PBA , core::scoring::hbonds::hbdon_CXA , core::scoring::hbonds::hbdon_IMD ,   core::scoring::hbonds::hbdon_IME , core::scoring::hbonds::hbdon_IND , core::scoring::hbonds::hbdon_AMO , core::scoring::hbonds::hbdon_GDE ,   core::scoring::hbonds::hbdon_GDH , core::scoring::hbonds::hbdon_AHX , core::scoring::hbonds::hbdon_HXL , core::scoring::hbonds::hbdon_H2O ,   core::scoring::hbonds::hbdon_GENERIC_BB , core::scoring::hbonds::hbdon_GENERIC_SC , core::scoring::hbonds::hbdon_MAX = hbdon_GENERIC_SC }
enum	core::scoring::hbonds::HBEvalType {   core::scoring::hbonds::hbe_UNKNOWN = 0 , core::scoring::hbonds::hbe_NONE =1 , core::scoring::hbonds::hbe_dPBAaPBAsepM4helix , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepM4helix = hbe_dPBAaPBAsepM4helix ,   core::scoring::hbonds::hbe_dPBAaPBAsepM3turn , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepM3turn = hbe_dPBAaPBAsepM3turn , core::scoring::hbonds::hbe_dPBAaPBAsepM2turn , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepM2turn = hbe_dPBAaPBAsepM2turn ,   core::scoring::hbonds::hbe_dPBAaPBAsepPM1 , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepPM1 = hbe_dPBAaPBAsepPM1 , core::scoring::hbonds::hbe_dPBAaPBAsepP2turn , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepP2turn = hbe_dPBAaPBAsepP2turn ,   core::scoring::hbonds::hbe_dPBAaPBAsepP3turn , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepP3turn = hbe_dPBAaPBAsepP3turn , core::scoring::hbonds::hbe_dPBAaPBAsepP4helix , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepP4helix = hbe_dPBAaPBAsepP4helix ,   core::scoring::hbonds::hbe_dPBAaPBAsepother , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaPROTEIN_BB_AMIDEsepother = hbe_dPBAaPBAsepother , core::scoring::hbonds::hbe_dCXAaPBAsepPM1 , core::scoring::hbonds::hbe_dCARBOXAMIDEaPROTEIN_BB_AMIDEsepPM1 = hbe_dCXAaPBAsepPM1 ,   core::scoring::hbonds::hbe_dIMDaPBAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPROTEIN_BB_AMIDEsepPM1 = hbe_dIMDaPBAsepPM1 , core::scoring::hbonds::hbe_dIMEaPBAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPROTEIN_BB_AMIDEsepPM1 = hbe_dIMEaPBAsepPM1 ,   core::scoring::hbonds::hbe_dINDaPBAsepPM1 , core::scoring::hbonds::hbe_dINDOLaPROTEIN_BB_AMIDEsepPM1 = hbe_dINDaPBAsepPM1 , core::scoring::hbonds::hbe_dAMOaPBAsepPM1 , core::scoring::hbonds::hbe_dAMINOaPROTEIN_BB_AMIDEsepPM1 = hbe_dAMOaPBAsepPM1 ,   core::scoring::hbonds::hbe_dGDEaPBAsepPM1 , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPROTEIN_BB_AMIDEsepPM1 = hbe_dGDEaPBAsepPM1 , core::scoring::hbonds::hbe_dGDHaPBAsepPM1 , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPROTEIN_BB_AMIDEsepPM1 = hbe_dGDHaPBAsepPM1 ,   core::scoring::hbonds::hbe_dAHXaPBAsepPM1 , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPROTEIN_BB_AMIDEsepPM1 = hbe_dAHXaPBAsepPM1 , core::scoring::hbonds::hbe_dHXLaPBAsepPM1 , core::scoring::hbonds::hbe_dHYDROXYLaPROTEIN_BB_AMIDEsepPM1 = hbe_dHXLaPBAsepPM1 ,   core::scoring::hbonds::hbe_dCXAaPBAsepother , core::scoring::hbonds::hbe_dCARBOXAMIDEaPROTEIN_BB_AMIDEsepother = hbe_dCXAaPBAsepother , core::scoring::hbonds::hbe_dIMDaPBAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPROTEIN_BB_AMIDEsepother = hbe_dIMDaPBAsepother ,   core::scoring::hbonds::hbe_dIMEaPBAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPROTEIN_BB_AMIDEsepother = hbe_dIMEaPBAsepother , core::scoring::hbonds::hbe_dINDaPBAsepother , core::scoring::hbonds::hbe_dINDOLaPROTEIN_BB_AMIDEsepother = hbe_dINDaPBAsepother ,   core::scoring::hbonds::hbe_dAMOaPBAsepother , core::scoring::hbonds::hbe_dAMINOaPROTEIN_BB_AMIDEsepother = hbe_dAMOaPBAsepother , core::scoring::hbonds::hbe_dGDEaPBAsepother , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPROTEIN_BB_AMIDEsepother = hbe_dGDEaPBAsepother ,   core::scoring::hbonds::hbe_dGDHaPBAsepother , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPROTEIN_BB_AMIDEsepother = hbe_dGDHaPBAsepother , core::scoring::hbonds::hbe_dAHXaPBAsepother , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPROTEIN_BB_AMIDEsepother = hbe_dAHXaPBAsepother ,   core::scoring::hbonds::hbe_dHXLaPBAsepother , core::scoring::hbonds::hbe_dHYDROXYLaPROTEIN_BB_AMIDEsepother = hbe_dHXLaPBAsepother , core::scoring::hbonds::hbe_dH2OaPBA , core::scoring::hbonds::hbe_WATERaPROTEIN_BB_AMIDE = hbe_dH2OaPBA ,   core::scoring::hbonds::hbe_dPBAaCXAsepPM1 , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaCARBOXAMIDEsepPM1 = hbe_dPBAaCXAsepPM1 , core::scoring::hbonds::hbe_dPBAaCXAsepother , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaCARBOXAMIDEsepother = hbe_dPBAaCXAsepother ,   core::scoring::hbonds::hbe_dCXAaCXA , core::scoring::hbonds::hbe_dCARBOXAMIDEaCARBOXAMIDE = hbe_dCXAaCXA , core::scoring::hbonds::hbe_dIMDaCXA , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaCARBOXAMIDE = hbe_dIMDaCXA ,   core::scoring::hbonds::hbe_dIMEaCXA , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaCARBOXAMIDE = hbe_dIMEaCXA , core::scoring::hbonds::hbe_dINDaCXA , core::scoring::hbonds::hbe_dINDOLaCARBOXAMIDE = hbe_dINDaCXA ,   core::scoring::hbonds::hbe_dAMOaCXA , core::scoring::hbonds::hbe_dAMINOaCARBOXAMIDE = hbe_dAMOaCXA , core::scoring::hbonds::hbe_dGDEaCXA , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaCARBOXAMIDE = hbe_dGDEaCXA ,   core::scoring::hbonds::hbe_dGDHaCXA , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaCARBOXAMIDE = hbe_dGDHaCXA , core::scoring::hbonds::hbe_dAHXaCXA , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaCARBOXAMIDE = hbe_dAHXaCXA ,   core::scoring::hbonds::hbe_dHXLaCXA , core::scoring::hbonds::hbe_dHYDROXYLaCARBOXAMIDE = hbe_dHXLaCXA , core::scoring::hbonds::hbe_dH2OaCXA , core::scoring::hbonds::hbe_dWATERaCARBOXAMIDE = hbe_dH2OaCXA ,   core::scoring::hbonds::hbe_dPBAaCXLsepPM1 , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaCARBOXYLsepPM1 = hbe_dPBAaCXLsepPM1 , core::scoring::hbonds::hbe_dPBAaCXLsepother , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaCARBOXYLsepother = hbe_dPBAaCXLsepother ,   core::scoring::hbonds::hbe_dCXAaCXL , core::scoring::hbonds::hbe_dCARBOXAMIDEaCARBOXYL = hbe_dCXAaCXL , core::scoring::hbonds::hbe_dIMDaCXL , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaCARBOXYL = hbe_dIMDaCXL ,   core::scoring::hbonds::hbe_dIMEaCXL , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaCARBOXYL = hbe_dIMEaCXL , core::scoring::hbonds::hbe_dINDaCXL , core::scoring::hbonds::hbe_dINDOLaCARBOXYL = hbe_dINDaCXL ,   core::scoring::hbonds::hbe_dAMOaCXL , core::scoring::hbonds::hbe_dAMINOaCARBOXYL = hbe_dAMOaCXL , core::scoring::hbonds::hbe_dGDEaCXL , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaCARBOXYL = hbe_dGDEaCXL ,   core::scoring::hbonds::hbe_dGDHaCXL , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaCARBOXYL = hbe_dGDHaCXL , core::scoring::hbonds::hbe_dAHXaCXL , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaCARBOXYL = hbe_dAHXaCXL ,   core::scoring::hbonds::hbe_dHXLaCXL , core::scoring::hbonds::hbe_dHYDROXYLaCARBOXYL = hbe_dHXLaCXL , core::scoring::hbonds::hbe_dH2OaCXL , core::scoring::hbonds::hbe_dWATERaCARBOXYL = hbe_dH2OaCXL ,   core::scoring::hbonds::hbe_dPBAaIMDsepPM1 , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaIMIDAZOL_DELTAsepPM1 = hbe_dPBAaIMDsepPM1 , core::scoring::hbonds::hbe_dPBAaIMDsepother , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaIMIDAZOL_DELTAsepother = hbe_dPBAaIMDsepother ,   core::scoring::hbonds::hbe_dCXAaIMD , core::scoring::hbonds::hbe_dCARBOXAMIDEaIMIDAZOL_DELTA = hbe_dCXAaIMD , core::scoring::hbonds::hbe_dIMDaIMD , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaIMIDAZOL_DELTA = hbe_dIMDaIMD ,   core::scoring::hbonds::hbe_dIMEaIMD , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaIMIDAZOL_DELTA = hbe_dIMEaIMD , core::scoring::hbonds::hbe_dINDaIMD , core::scoring::hbonds::hbe_dINDOLaIMIDAZOL_DELTA = hbe_dINDaIMD ,   core::scoring::hbonds::hbe_dAMOaIMD , core::scoring::hbonds::hbe_dAMINOaIMIDAZOL_DELTA = hbe_dAMOaIMD , core::scoring::hbonds::hbe_dGDEaIMD , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaIMIDAZOL_DELTA = hbe_dGDEaIMD ,   core::scoring::hbonds::hbe_dGDHaIMD , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaIMIDAZOL_DELTA = hbe_dGDHaIMD , core::scoring::hbonds::hbe_dAHXaIMD , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaIMIDAZOL_DELTA = hbe_dAHXaIMD ,   core::scoring::hbonds::hbe_dHXLaIMD , core::scoring::hbonds::hbe_dHYDROXYLaIMIDAZOL_DELTA = hbe_dHXLaIMD , core::scoring::hbonds::hbe_dH2OaIMD , core::scoring::hbonds::hbe_dWATERaIMIDAZOL_DELTA = hbe_dH2OaIMD ,   core::scoring::hbonds::hbe_dPBAaIMEsepPM1 , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaIMIDAZOL_EPSILONsepPM1 = hbe_dPBAaIMEsepPM1 , core::scoring::hbonds::hbe_dPBAaIMEsepother , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaIMIDAZOL_EPSILONsepother = hbe_dPBAaIMEsepother ,   core::scoring::hbonds::hbe_dCXAaIME , core::scoring::hbonds::hbe_dCARBOXAMIDEaIMIDAZOL_EPSILON = hbe_dCXAaIME , core::scoring::hbonds::hbe_dIMDaIME , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaIMIDAZOL_EPSILON = hbe_dIMDaIME ,   core::scoring::hbonds::hbe_dIMEaIME , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaIMIDAZOL_EPSILON = hbe_dIMEaIME , core::scoring::hbonds::hbe_dINDaIME , core::scoring::hbonds::hbe_dINDOLaIMIDAZOL_EPSILON = hbe_dINDaIME ,   core::scoring::hbonds::hbe_dAMOaIME , core::scoring::hbonds::hbe_dAMINOaIMIDAZOL_EPSILON = hbe_dAMOaIME , core::scoring::hbonds::hbe_dGDEaIME , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaIMIDAZOL_EPSILON = hbe_dGDEaIME ,   core::scoring::hbonds::hbe_dGDHaIME , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaIMIDAZOL_EPSILON = hbe_dGDHaIME , core::scoring::hbonds::hbe_dAHXaIME , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaIMIDAZOL_EPSILON = hbe_dAHXaIME ,   core::scoring::hbonds::hbe_dHXLaIME , core::scoring::hbonds::hbe_dHYDROXYLaIMIDAZOL_EPSILON = hbe_dHXLaIME , core::scoring::hbonds::hbe_dH2OaIME , core::scoring::hbonds::hbe_dWATERaIMIDAZOL_EPSILON = hbe_dH2OaIME ,   core::scoring::hbonds::hbe_dPBAaAHXsepPM1 , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaAROMATIC_HYDROXYLsepPM1 = hbe_dPBAaAHXsepPM1 , core::scoring::hbonds::hbe_dPBAaAHXsepother , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaAROMATIC_HYDROXYLsepother = hbe_dPBAaAHXsepother ,   core::scoring::hbonds::hbe_dCXAaAHX , core::scoring::hbonds::hbe_dCARBOXAMIDEaAROMATIC_HYDROXYL = hbe_dCXAaAHX , core::scoring::hbonds::hbe_dIMDaAHX , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaAROMATIC_HYDROXYL = hbe_dIMDaAHX ,   core::scoring::hbonds::hbe_dIMEaAHX , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaAROMATIC_HYDROXYL = hbe_dIMEaAHX , core::scoring::hbonds::hbe_dINDaAHX , core::scoring::hbonds::hbe_dINDOLaAROMATIC_HYDROXYL = hbe_dINDaAHX ,   core::scoring::hbonds::hbe_dAMOaAHX , core::scoring::hbonds::hbe_dAMINOaAROMATIC_HYDROXYL = hbe_dAMOaAHX , core::scoring::hbonds::hbe_dGDEaAHX , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaAROMATIC_HYDROXYL = hbe_dGDEaAHX ,   core::scoring::hbonds::hbe_dGDHaAHX , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaAROMATIC_HYDROXYL = hbe_dGDHaAHX , core::scoring::hbonds::hbe_dAHXaAHX , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaAROMATIC_HYDROXYL = hbe_dAHXaAHX ,   core::scoring::hbonds::hbe_dHXLaAHX , core::scoring::hbonds::hbe_dHYDROXYLaAROMATIC_HYDROXYL = hbe_dHXLaAHX , core::scoring::hbonds::hbe_dH2OaAHX , core::scoring::hbonds::hbe_dWATERaAROMATIC_HYDROXYL = hbe_dH2OaAHX ,   core::scoring::hbonds::hbe_dPBAaHXLsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaHYDROXYLsepPM1 = hbe_dPBAaHXLsepPM1 , core::scoring::hbonds::hbe_dPBAaHXLsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaHYDROXYLsepother = hbe_dPBAaHXLsepother ,   core::scoring::hbonds::hbe_dCXAaHXL , core::scoring::hbonds::hbe_dCARBOXAMIDEaHYDROXYL = hbe_dCXAaHXL , core::scoring::hbonds::hbe_dIMDaHXL , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaHYDROXYL = hbe_dIMDaHXL ,   core::scoring::hbonds::hbe_dIMEaHXL , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaHYDXROXYL = hbe_dIMEaHXL , core::scoring::hbonds::hbe_dINDaHXL , core::scoring::hbonds::hbe_dINDOLaHYDROXYL = hbe_dINDaHXL ,   core::scoring::hbonds::hbe_dAMOaHXL , core::scoring::hbonds::hbe_dAMINOaHYDROXYL = hbe_dAMOaHXL , core::scoring::hbonds::hbe_dGDEaHXL , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaHYDROXYL = hbe_dGDEaHXL ,   core::scoring::hbonds::hbe_dGDHaHXL , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaHYDROXYL = hbe_dGDHaHXL , core::scoring::hbonds::hbe_dAHXaHXL , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaHYDROXYL = hbe_dAHXaHXL ,   core::scoring::hbonds::hbe_dHXLaHXL , core::scoring::hbonds::hbe_dHYDROXYLaHYDROXYL = hbe_dHXLaHXL , core::scoring::hbonds::hbe_dH2OaHXL , core::scoring::hbonds::hbe_dWATERaHYDROXYL = hbe_dH2OaHXL ,   core::scoring::hbonds::hbe_dPBAaPCA_DNAsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_CARBONYL_DNAsepPM1 = hbe_dPBAaPCA_DNAsepPM1 , core::scoring::hbonds::hbe_dPBAaPCA_DNAsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_CARBONYL_DNAsepother = hbe_dPBAaPCA_DNAsepother ,   core::scoring::hbonds::hbe_dCXAaPCA_DNA , core::scoring::hbonds::hbe_dCARBOXAMIDEaPHOSPHATE_CARBONYL_DNA = hbe_dCXAaPCA_DNA , core::scoring::hbonds::hbe_dIMDaPCA_DNA , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPHOSPHATE_CARBONYL_DNA = hbe_dIMDaPCA_DNA ,   core::scoring::hbonds::hbe_dIMEaPCA_DNA , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPHOSPHATE_CARBONYL_DNA = hbe_dIMEaPCA_DNA , core::scoring::hbonds::hbe_dINDaPCA_DNA , core::scoring::hbonds::hbe_dINDOLaPHOSPHATE_CARBONYL_DNA = hbe_dINDaPCA_DNA ,   core::scoring::hbonds::hbe_dAMOaPCA_DNA , core::scoring::hbonds::hbe_dAMINOaPHOSPHATE_CARBONYL_DNA = hbe_dAMOaPCA_DNA , core::scoring::hbonds::hbe_dGDEaPCA_DNA , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPHOSPHATE_CARBONYL_DNA = hbe_dGDEaPCA_DNA ,   core::scoring::hbonds::hbe_dGDHaPCA_DNA , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPHOSPHATE_CARBONY_DNA = hbe_dGDHaPCA_DNA , core::scoring::hbonds::hbe_dAHXaPCA_DNA , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPHOSPHATE_CARBONYL_DNA = hbe_dAHXaPCA_DNA ,   core::scoring::hbonds::hbe_dHXLaPCA_DNA , core::scoring::hbonds::hbe_dHYDROXYLaPHOSPHATE_CARBONYL_DNA = hbe_dHXLaPCA_DNA , core::scoring::hbonds::hbe_dH2OaPCA_DNA , core::scoring::hbonds::hbe_dWATERaPHOSPHATE_CARBONYL_DNA = hbe_dH2OaPCA_DNA ,   core::scoring::hbonds::hbe_dPBAaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dPBAaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dPBAaPCA_RNAsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_CARBONYL_RNAsepother = hbe_dPBAaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dCXAaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dCARBOXAMIDEaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dCXAaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dCXAaPCA_RNAsepother , core::scoring::hbonds::hbe_dCARBOXAMIDEaPHOSPHATE_CARBONYL_RNAsepother = hbe_dCXAaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dIMDaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dIMDaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dIMDaPCA_RNAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPHOSPHATE_CARBONYL_RNAsepother = hbe_dIMDaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dIMEaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dIMEaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dIMEaPCA_RNAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPHOSPHATE_CARBONYL_RNAsepother = hbe_dIMEaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dINDaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dINDOLaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dINDaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dINDaPCA_RNAsepother , core::scoring::hbonds::hbe_dINDOLaPHOSPHATE_CARBONYL_RNAsepother = hbe_dINDaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dAMOaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dAMINOaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dAMOaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dAMOaPCA_RNAsepother , core::scoring::hbonds::hbe_dAMINOaPHOSPHATE_CARBONYL_RNAsepother = hbe_dAMOaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dGDEaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dGDEaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dGDEaPCA_RNAsepother , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPHOSPHATE_CARBONYL_RNAsepother = hbe_dGDEaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dGDHaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPHOSPHATE_CARBONY_RNAsepPM1 = hbe_dGDHaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dGDHaPCA_RNAsepother , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPHOSPHATE_CARBONY_RNAsepother = hbe_dGDHaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dAHXaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dAHXaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dAHXaPCA_RNAsepother , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPHOSPHATE_CARBONYL_RNAsepother = hbe_dAHXaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dHXLaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dHYDROXYLaPHOSPHATE_CARBONYL_RNAsepPM1 = hbe_dHXLaPCA_RNAsepPM1 , core::scoring::hbonds::hbe_dHXLaPCA_RNAsepother , core::scoring::hbonds::hbe_dHYDROXYLaPHOSPHATE_CARBONYL_RNAsepother = hbe_dHXLaPCA_RNAsepother ,   core::scoring::hbonds::hbe_dH2OaPCA_RNA , core::scoring::hbonds::hbe_dWATERaPHOSPHATE_CARBONYL_RNA = hbe_dH2OaPCA_RNA , core::scoring::hbonds::hbe_dPBAaPES_DNAsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_ESTER_DNAsepPM1 = hbe_dPBAaPES_DNAsepPM1 ,   core::scoring::hbonds::hbe_dPBAaPES_DNAsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_ESTER_DNAsepother = hbe_dPBAaPES_DNAsepother , core::scoring::hbonds::hbe_dCXAaPES_DNA , core::scoring::hbonds::hbe_dCARBOXAMIDEaPHOSPHATE_ESTER_DNA = hbe_dCXAaPES_DNA ,   core::scoring::hbonds::hbe_dIMDaPES_DNA , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPHOSPHATE_ESTER_DNA = hbe_dIMDaPES_DNA , core::scoring::hbonds::hbe_dIMEaPES_DNA , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPHOSPHATE_ESTER_DNA = hbe_dIMEaPES_DNA ,   core::scoring::hbonds::hbe_dINDaPES_DNA , core::scoring::hbonds::hbe_dINDOLaPHOSPHATE_ESTER_DNA = hbe_dINDaPES_DNA , core::scoring::hbonds::hbe_dAMOaPES_DNA , core::scoring::hbonds::hbe_dAMINOaPHOSPHATE_ESTER_DNA = hbe_dAMOaPES_DNA ,   core::scoring::hbonds::hbe_dGDEaPES_DNA , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPHOSPHATE_ESTER_DNA = hbe_dGDEaPES_DNA , core::scoring::hbonds::hbe_dGDHaPES_DNA , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPHOSPHATE_ESTER_DNA = hbe_dGDHaPES_DNA ,   core::scoring::hbonds::hbe_dAHXaPES_DNA , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPHOSPHATE_ESTER_DNA = hbe_dAHXaPES_DNA , core::scoring::hbonds::hbe_dHXLaPES_DNA , core::scoring::hbonds::hbe_dHYDROXYLaPHOSPHATE_ESTER_DNA = hbe_dHXLaPES_DNA ,   core::scoring::hbonds::hbe_dH2OaPES_DNA , core::scoring::hbonds::hbe_dWATERaPHOSPHATE_ESTER_DNA = hbe_dH2OaPES_DNA , core::scoring::hbonds::hbe_dPBAaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dPBAaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dPBAaPES_RNAsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaPHOSPHATE_ESTER_RNAsepother = hbe_dPBAaPES_RNAsepother , core::scoring::hbonds::hbe_dCXAaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dCARBOXAMIDEaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dCXAaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dCXAaPES_RNAsepother , core::scoring::hbonds::hbe_dCARBOXAMIDEaPHOSPHATE_ESTER_RNAsepother = hbe_dCXAaPES_RNAsepother , core::scoring::hbonds::hbe_dIMDaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dIMDaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dIMDaPES_RNAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaPHOSPHATE_ESTER_RNAsepother = hbe_dIMDaPES_RNAsepother , core::scoring::hbonds::hbe_dIMEaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dIMEaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dIMEaPES_RNAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaPHOSPHATE_ESTER_RNAsepother = hbe_dIMEaPES_RNAsepother , core::scoring::hbonds::hbe_dINDaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dINDOLaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dINDaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dINDaPES_RNAsepother , core::scoring::hbonds::hbe_dINDOLaPHOSPHATE_ESTER_RNAsepother = hbe_dINDaPES_RNAsepother , core::scoring::hbonds::hbe_dAMOaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dAMINOaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dAMOaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dAMOaPES_RNAsepother , core::scoring::hbonds::hbe_dAMINOaPHOSPHATE_ESTER_RNAsepother = hbe_dAMOaPES_RNAsepother , core::scoring::hbonds::hbe_dGDEaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dGDEaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dGDEaPES_RNAsepother , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaPHOSPHATE_ESTER_RNAsepother = hbe_dGDEaPES_RNAsepother , core::scoring::hbonds::hbe_dGDHaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dGDHaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dGDHaPES_RNAsepother , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaPHOSPHATE_ESTER_RNAsepother = hbe_dGDHaPES_RNAsepother , core::scoring::hbonds::hbe_dAHXaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dAHXaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dAHXaPES_RNAsepother , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaPHOSPHATE_ESTER_RNAsepother = hbe_dAHXaPES_RNAsepother , core::scoring::hbonds::hbe_dHXLaPES_RNAsepPM1 , core::scoring::hbonds::hbe_dHYDROXYLaPHOSPHATE_ESTER_RNAsepPM1 = hbe_dHXLaPES_RNAsepPM1 ,   core::scoring::hbonds::hbe_dHXLaPES_RNAsepother , core::scoring::hbonds::hbe_dHYDROXYLaPHOSPHATE_ESTER_RNAsepother = hbe_dHXLaPES_RNAsepother , core::scoring::hbonds::hbe_dH2OaPES_RNA , core::scoring::hbonds::hbe_dWATERaPHOSPHATE_ESTER_RNAsepother = hbe_dH2OaPES_RNA ,   core::scoring::hbonds::hbe_dPBAaRRI_DNAsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaRIBOSE_RING_DNAsepPM1 = hbe_dPBAaRRI_DNAsepPM1 , core::scoring::hbonds::hbe_dPBAaRRI_DNAsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaRIBOSE_RING_DNAsepother = hbe_dPBAaRRI_DNAsepother ,   core::scoring::hbonds::hbe_dCXAaRRI_DNA , core::scoring::hbonds::hbe_dCARBOXAMIDEaRIBOSE_RING_DNA = hbe_dCXAaRRI_DNA , core::scoring::hbonds::hbe_dIMDaRRI_DNA , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaRIBOSE_RING_DNA = hbe_dIMDaRRI_DNA ,   core::scoring::hbonds::hbe_dIMEaRRI_DNA , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaRIBOSE_RING_DNA = hbe_dIMEaRRI_DNA , core::scoring::hbonds::hbe_dINDaRRI_DNA , core::scoring::hbonds::hbe_dINDOLaRIBOSE_RING_DNA = hbe_dINDaRRI_DNA ,   core::scoring::hbonds::hbe_dAMOaRRI_DNA , core::scoring::hbonds::hbe_dAMINOaRIBOSE_RING_DNA = hbe_dAMOaRRI_DNA , core::scoring::hbonds::hbe_dGDEaRRI_DNA , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaRIBOSE_RING_DNA = hbe_dGDEaRRI_DNA ,   core::scoring::hbonds::hbe_dGDHaRRI_DNA , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaRIBOSE_RING_DNA = hbe_dGDHaRRI_DNA , core::scoring::hbonds::hbe_dAHXaRRI_DNA , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaRIBOSE_RING_DNA = hbe_dAHXaRRI_DNA ,   core::scoring::hbonds::hbe_dHXLaRRI_DNA , core::scoring::hbonds::hbe_dHYDROXYLaRIBOSE_RING_DNA = hbe_dHXLaRRI_DNA , core::scoring::hbonds::hbe_dH2OaRRI_DNA , core::scoring::hbonds::hbe_dWATERaRIBOSE_RING_DNA = hbe_dH2OaRRI_DNA ,   core::scoring::hbonds::hbe_dPBAaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaRIBOSE_RING_RNAsepPM1 = hbe_dPBAaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dPBAaRRI_RNAsepother , core::scoring::hbonds::hbe_dPROTEINS_BB_AMIDEaRIBOSE_RING_RNAsepother = hbe_dPBAaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dCXAaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dCARBOXAMIDEaRIBOSE_RING_RNAsepPM1 = hbe_dCXAaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dCXAaRRI_RNAsepother , core::scoring::hbonds::hbe_dCARBOXAMIDEaRIBOSE_RING_RNAsepother = hbe_dCXAaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dIMDaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaRIBOSE_RING_RNAsepPM1 = hbe_dIMDaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dIMDaRRI_RNAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaRIBOSE_RING_RNAsepother = hbe_dIMDaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dIMEaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaRIBOSE_RING_RNAsepPM1 = hbe_dIMEaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dIMEaRRI_RNAsepother , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaRIBOSE_RING_RNAsepother = hbe_dIMEaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dINDaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dINDOLaRIBOSE_RING_RNAsepPM1 = hbe_dINDaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dINDaRRI_RNAsepother , core::scoring::hbonds::hbe_dINDOLaRIBOSE_RING_RNAsepother = hbe_dINDaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dAMOaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dAMINOaRIBOSE_RING_RNAsepPM1 = hbe_dAMOaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dAMOaRRI_RNAsepother , core::scoring::hbonds::hbe_dAMINOaRIBOSE_RING_RNAsepother = hbe_dAMOaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dGDEaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaRIBOSE_RING_RNAsepPM1 = hbe_dGDEaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dGDEaRRI_RNAsepother , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaRIBOSE_RING_RNAsepother = hbe_dGDEaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dGDHaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaRIBOSE_RING_RNAsepPM1 = hbe_dGDHaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dGDHaRRI_RNAsepother , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaRIBOSE_RING_RNAsepother = hbe_dGDHaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dAHXaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaRIBOSE_RING_RNAsepPM1 = hbe_dAHXaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dAHXaRRI_RNAsepother , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaRIBOSE_RING_RNAsepother = hbe_dAHXaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dHXLaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dHYDROXYLaRIBOSE_RING_RNAsepPM1 = hbe_dHXLaRRI_RNAsepPM1 , core::scoring::hbonds::hbe_dHXLaRRI_RNAsepother , core::scoring::hbonds::hbe_dHYDROXYLaRIBOSE_RING_RNAsepother = hbe_dHXLaRRI_RNAsepother ,   core::scoring::hbonds::hbe_dH2OaRRI_RNA , core::scoring::hbonds::hbe_dWATERaRIBOSE_RING_RNAsepother = hbe_dH2OaRRI_RNA , core::scoring::hbonds::hbe_dPBAaH2O , core::scoring::hbonds::hbe_dPROTEIN_BB_AMIDEaWATER = hbe_dPBAaH2O ,   core::scoring::hbonds::hbe_dCXAaH2O , core::scoring::hbonds::hbe_dCARBOXAMIDEaWATER = hbe_dCXAaH2O , core::scoring::hbonds::hbe_dIMDaH2O , core::scoring::hbonds::hbe_dIMIDAZOL_DELTAaWATER = hbe_dIMDaH2O ,   core::scoring::hbonds::hbe_dIMEaH2O , core::scoring::hbonds::hbe_dIMIDAZOL_EPSILONaWATER = hbe_dIMEaH2O , core::scoring::hbonds::hbe_dINDaH2O , core::scoring::hbonds::hbe_dINDOLaWATER = hbe_dINDaH2O ,   core::scoring::hbonds::hbe_dAMOaH2O , core::scoring::hbonds::hbe_dAMINOaWATER = hbe_dAMOaH2O , core::scoring::hbonds::hbe_dGDEaH2O , core::scoring::hbonds::hbe_dGUANIDINIUM_EPSILONaWATER = hbe_dGDEaH2O ,   core::scoring::hbonds::hbe_dGDHaH2O , core::scoring::hbonds::hbe_dDIHYDRO_GUANIDINIUMaWATER = hbe_dGDHaH2O , core::scoring::hbonds::hbe_dAHXaH2O , core::scoring::hbonds::hbe_dAROMATIC_HYDROXYLaWATER = hbe_dAHXaH2O ,   core::scoring::hbonds::hbe_dHXLaH2O , core::scoring::hbonds::hbe_dHYDROXYLaWATER = hbe_dHXLaH2O , core::scoring::hbonds::hbe_dH2OaH2O , core::scoring::hbonds::hbe_dWATERaWATER = hbe_dH2OaH2O ,   core::scoring::hbonds::hbe_GENERIC_SP2BB_SR , core::scoring::hbonds::hbe_GENERIC_SP2BB_LR , core::scoring::hbonds::hbe_GENERIC_SP3BB_SR , core::scoring::hbonds::hbe_GENERIC_SP3BB_LR ,   core::scoring::hbonds::hbe_GENERIC_RINGBB_SR , core::scoring::hbonds::hbe_GENERIC_RINGBB_LR , core::scoring::hbonds::hbe_GENERIC_SP2BSC_SR , core::scoring::hbonds::hbe_GENERIC_SP2BSC_LR ,   core::scoring::hbonds::hbe_GENERIC_SP3BSC_SR , core::scoring::hbonds::hbe_GENERIC_SP3BSC_LR , core::scoring::hbonds::hbe_GENERIC_RINGBSC_SR , core::scoring::hbonds::hbe_GENERIC_RINGBSC_LR ,   core::scoring::hbonds::hbe_GENERIC_SP2SCSC_SR , core::scoring::hbonds::hbe_GENERIC_SP2SCSC_LR , core::scoring::hbonds::hbe_GENERIC_SP3SCSC_SR , core::scoring::hbonds::hbe_GENERIC_SP3SCSC_LR ,   core::scoring::hbonds::hbe_GENERIC_RINGSCSC_SR , core::scoring::hbonds::hbe_GENERIC_RINGSCSC_LR , core::scoring::hbonds::hbe_MAX = hbe_GENERIC_RINGSCSC_LR }
enum	core::scoring::hbonds::HBSeqSep {   core::scoring::hbonds::seq_sep_other = 1 , core::scoring::hbonds::seq_sep_M4 , core::scoring::hbonds::seq_sep_M3 , core::scoring::hbonds::seq_sep_M2 ,   core::scoring::hbonds::seq_sep_PM1 , core::scoring::hbonds::seq_sep_P2 , core::scoring::hbonds::seq_sep_P3 , core::scoring::hbonds::seq_sep_P4 ,   core::scoring::hbonds::seq_sep_MAX = seq_sep_P4 }
enum	core::scoring::hbonds::which_atom_in_hbond {   core::scoring::hbonds::which_hb_unassigned = 0 , core::scoring::hbonds::which_hb_hatm , core::scoring::hbonds::which_hb_datm , core::scoring::hbonds::which_last_donor_atm = which_hb_datm ,   core::scoring::hbonds::which_hb_aatm , core::scoring::hbonds::which_hb_abase , core::scoring::hbonds::which_hb_abase_prime , core::scoring::hbonds::which_hb_abase2 ,   core::scoring::hbonds::n_hb_atoms = which_hb_abase2 }
	If you have an atom that is involved in a hydrogen bond, this enumeration will help you keep track of the role that the atom plays. More...
enum	core::scoring::hbonds::HBGeoDimType {   core::scoring::hbonds::hbgd_NONE = 1 , core::scoring::hbonds::hbgd_AHdist , core::scoring::hbonds::hbgd_cosBAH , core::scoring::hbonds::hbgd_cosAHD ,   core::scoring::hbonds::hbgd_AHD , core::scoring::hbonds::hbgd_chi , core::scoring::hbonds::hbgd_MAX =hbgd_chi }
enum	core::scoring::hbonds::HBDerivType {   core::scoring::hbonds::hbderiv_NONE = 1 , core::scoring::hbonds::hbderiv_ABE_GO , core::scoring::hbonds::hbderiv_ABE_GO_GEOMSOL_OCC_ACC , core::scoring::hbonds::hbderiv_ABE_GO_GEOMSOL_OCC_DON ,   core::scoring::hbonds::hbderiv_MAX = hbderiv_ABE_GO_GEOMSOL_OCC_DON }

Functions
HBEvalType	core::scoring::hbonds::string_to_hb_eval_type (std::string const &hbe_str)
	converts a string into an HBEvalType More...
void	core::scoring::hbonds::HBEval_lookup_initializer (ObjexxFCL::FArray3D< HBEvalType > &hbe)
void	core::scoring::hbonds::initialize_HBEval_lookup ()
	makes it explicit that the HBEval lookup table is initialized somewhere More...
bool	core::scoring::hbonds::hbe_is_BB_type (HBEvalType hbe)
bool	core::scoring::hbonds::hbe_is_SC_type (HBEvalType hbe)
HBondWeightType	core::scoring::hbonds::get_hbond_weight_type (HBEvalType const &hbe_type)
chemical::Hybridization	core::scoring::hbonds::get_hbe_acc_hybrid (HBEvalType const &hbe)
Size	core::scoring::hbonds::hb_eval_type (HBDonChemType don_chem_type, HBAccChemType acc_chem_type, HBSeqSep seq_sep_type)

Detailed Description

core::scoring package type declarations

Author

Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)