protocols::canonical_sampling::mc_convergence_checks::DataBuffer Struct Reference

#include <pool_util.hh>

Public Member Functions
	DataBuffer ()
	~DataBuffer ()
void	setup (int num_slave_nodes, int nresidues, int nlevels)
void	address_to_buf (utility::vector1< core::Size > &address, int *buf, core::Size start_index)
void	buf_to_address (utility::vector1< core::Size > &address, const int *buf, core::Size start_index)
void	farray_to_array (core::Size index, FArray2D_double const &coords, core::Real *coord_buf)
void	farray_to_array (core::Size index, core::Size num_to_add, FArray2D_double const &coords, core::Real *coord_buf)
void	array_to_farray (core::Size index, FArray2D_double &coords, core::Real *coord_buf)
void	array_to_farray (core::Size index, core::Size num_to_add, FArray2D_double &coords, const core::Real *coord_buf)

Public Attributes
int *	neighbor_addresses_
core::Real *	coords_transfer_buffer_
core::Real *	coords_receiving_buffer_
FArray2D_double	coords_
FArray2D_double	temp_coords_
core::Size	num_new_neighbors_
int *	memory_offset_
int *	int_buf1_
int *	winning_ranks_
FArray2D_double	candidate_coords_
core::Size	candidate_nbr_index_
core::Real	candidate_best_rmsd_
core::Real *	candidate_best_rmsds_
Address	candidate_address_
std::string	winning_tag_
Address	winning_address_
core::Size	new_level_begins_
utility::vector1< core::Real >	best_candidate_rmsds_
utility::vector1< bool >	is_a_neighbor_
int *	finished_

Constructor & Destructor Documentation

DataBuffer()

protocols::canonical_sampling::mc_convergence_checks::DataBuffer::DataBuffer

(

)

~DataBuffer()

protocols::canonical_sampling::mc_convergence_checks::DataBuffer::~DataBuffer

(

)

References candidate_best_rmsds_, coords_receiving_buffer_, coords_transfer_buffer_, finished_, int_buf1_, memory_offset_, neighbor_addresses_, and winning_ranks_.

Member Function Documentation

address_to_buf()

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::address_to_buf	(	utility::vector1< core::Size > &	address,
		int *	buf,
		core::Size	start_index
	)

array_to_farray() [1/2]

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::array_to_farray	(	core::Size	index,
		core::Size	num_to_add,
		FArray2D_double &	coords,
		const core::Real *	coord_buf
	)

References protocols::simple_filters::coords().

array_to_farray() [2/2]

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::array_to_farray	(	core::Size	index,
		FArray2D_double &	coords,
		core::Real *	coord_buf
	)

References protocols::simple_filters::coords().

buf_to_address()

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::buf_to_address	(	utility::vector1< core::Size > &	address,
		const int *	buf,
		core::Size	start_index
	)

farray_to_array() [1/2]

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::farray_to_array	(	core::Size	index,
		core::Size	num_to_add,
		FArray2D_double const &	coords,
		core::Real *	coord_buf
	)

References protocols::simple_filters::coords().

farray_to_array() [2/2]

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::farray_to_array	(	core::Size	index,
		FArray2D_double const &	coords,
		core::Real *	coord_buf
	)

References protocols::simple_filters::coords().

setup()

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::setup	(	int	num_slave_nodes,
		int	nresidues,
		int	nlevels
	)

References candidate_address_, candidate_best_rmsds_, candidate_coords_, coords_, coords_receiving_buffer_, coords_transfer_buffer_, finished_, int_buf1_, is_a_neighbor_, memory_offset_, neighbor_addresses_, num_new_neighbors_, temp_coords_, protocols::canonical_sampling::mc_convergence_checks::TR(), winning_address_, and winning_ranks_.

Member Data Documentation

best_candidate_rmsds_

utility::vector1< core::Real > protocols::canonical_sampling::mc_convergence_checks::DataBuffer::best_candidate_rmsds_

candidate_address_

Address protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_address_

Referenced by setup().

candidate_best_rmsd_

core::Real protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_best_rmsd_

candidate_best_rmsds_

core::Real* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_best_rmsds_

Referenced by setup(), and ~DataBuffer().

candidate_coords_

FArray2D_double protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_coords_

Referenced by setup().

candidate_nbr_index_

core::Size protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_nbr_index_

coords_

FArray2D_double protocols::canonical_sampling::mc_convergence_checks::DataBuffer::coords_

Referenced by setup().

coords_receiving_buffer_

core::Real* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::coords_receiving_buffer_

Referenced by setup(), and ~DataBuffer().

coords_transfer_buffer_

core::Real* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::coords_transfer_buffer_

Referenced by setup(), and ~DataBuffer().

finished_

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::finished_

Referenced by setup(), and ~DataBuffer().

int_buf1_

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::int_buf1_

Referenced by setup(), and ~DataBuffer().

is_a_neighbor_

utility::vector1< bool > protocols::canonical_sampling::mc_convergence_checks::DataBuffer::is_a_neighbor_

Referenced by setup().

memory_offset_

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::memory_offset_

Referenced by setup(), and ~DataBuffer().

neighbor_addresses_

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::neighbor_addresses_

Referenced by setup(), and ~DataBuffer().

new_level_begins_

core::Size protocols::canonical_sampling::mc_convergence_checks::DataBuffer::new_level_begins_

num_new_neighbors_

core::Size protocols::canonical_sampling::mc_convergence_checks::DataBuffer::num_new_neighbors_

Referenced by setup().

temp_coords_

FArray2D_double protocols::canonical_sampling::mc_convergence_checks::DataBuffer::temp_coords_

Referenced by setup().

winning_address_

Address protocols::canonical_sampling::mc_convergence_checks::DataBuffer::winning_address_

Referenced by setup().

winning_ranks_

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::winning_ranks_

Referenced by setup(), and ~DataBuffer().

winning_tag_

std::string protocols::canonical_sampling::mc_convergence_checks::DataBuffer::winning_tag_

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The documentation for this struct was generated from the following files:

• src/protocols/canonical_sampling/mc_convergence_checks/pool_util.hh
• src/protocols/canonical_sampling/mc_convergence_checks/pool_util.cc