scoring → id Relation

File in src/core/scoring	Includes file in src/core/id
constraints / AmbiguousConstraint.hh	SequenceMapping.fwd.hh
constraints / AmbiguousNMRDistanceConstraint.cc	AtomID.hh
constraints / AmbiguousNMRDistanceConstraint.cc	NamedAtomID.hh
constraints / AmbiguousNMRDistanceConstraint.cc	SequenceMapping.hh
constraints / AmbiguousNMRDistanceConstraint.hh	AtomID.hh
constraints / AmbiguousNMRDistanceConstraint.hh	NamedAtomID.fwd.hh
constraints / AngleConstraint.cc	AtomID.hh
constraints / AngleConstraint.cc	NamedAtomID.hh
constraints / AngleConstraint.cc	SequenceMapping.hh
constraints / AngleConstraint.hh	AtomID.hh
APBSWrapper.cc	AtomID_Map.hh
APBSWrapper.hh	AtomID_Map.fwd.hh
constraints / AtomPairConstraint.cc	AtomID.hh
constraints / AtomPairConstraint.cc	NamedAtomID.hh
constraints / AtomPairConstraint.cc	SequenceMapping.hh
constraints / AtomPairConstraint.hh	AtomID.hh
constraints / AtomToAxisConstraint.cc	AtomID.hh
constraints / AtomToAxisConstraint.cc	NamedAtomID.hh
constraints / AtomToAxisConstraint.cc	SequenceMapping.hh
constraints / AtomToAxisConstraint.hh	AtomID.hh
constraints / BackboneStubConstraint.cc	SequenceMapping.hh
constraints / BackboneStubLinearConstraint.cc	SequenceMapping.hh
constraints / BasePairConstraint.cc	SequenceMapping.hh
constraints / BasePairConstraint.hh	AtomID.hh
constraints / BasePairConstraint.hh	SequenceMapping.fwd.hh
constraints / BigBinConstraint.hh	AtomID.hh
packing / compute_holes_score.hh	AtomID_Map.hh
packing / compute_holes_score_res.hh	AtomID_Map.fwd.hh
packstat / compute_sasa.hh	AtomID_Map.fwd.hh
constraints / ConstantConstraint.cc	AtomID.hh
constraints / Constraint.cc	AtomID.hh
constraints / Constraint.hh	AtomID.fwd.hh
constraints / Constraint.hh	SequenceMapping.fwd.hh
constraints / ConstraintIO.cc	AtomID.hh
constraints / Constraints.hh	AtomID.fwd.hh
constraints / ConstraintsEnergy.hh	TorsionID.fwd.hh
constraints / ConstraintSet.cc	SequenceMapping.hh
constraints / ConstraintSet.hh	DOF_ID.hh
constraints / ConstraintSet.hh	SequenceMapping.fwd.hh
constraints / CoordinateConstraint.cc	AtomID.hh
constraints / CoordinateConstraint.cc	NamedAtomID.hh
constraints / CoordinateConstraint.cc	SequenceMapping.hh
constraints / CoordinateConstraint.hh	AtomID.hh
constraints / DihedralConstraint.cc	NamedAtomID.hh
constraints / DihedralConstraint.cc	SequenceMapping.hh
constraints / DihedralConstraint.hh	AtomID.hh
constraints / DihedralPairConstraint.cc	NamedAtomID.hh
constraints / DihedralPairConstraint.cc	SequenceMapping.hh
constraints / DihedralPairConstraint.hh	AtomID.hh
constraints / DistancePairConstraint.cc	NamedAtomID.hh
constraints / DistancePairConstraint.cc	SequenceMapping.hh
constraints / DistancePairConstraint.hh	AtomID.hh
dna / DNATorsionPotential.hh	AtomID.fwd.hh
constraints / DOF_Constraint.hh	DOF_ID.hh
dssp / Dssp.cc	AtomID.hh
dssp / Dssp.cc	NamedAtomID.hh
sc / ElectrostaticComplementarityCalculator.hh	AtomID_Map.hh
sc / ElectrostaticSimilarityCalculator.hh	AtomID_Map.hh
Energies.cc	AtomID.hh
Energies.hh	AtomID.fwd.hh
Energies.hh	AtomID_Mask.fwd.hh
methods / EnergyMethod.hh	AtomID.fwd.hh
constraints / FabConstraint.cc	AtomID.hh
facts / FACTSPotential.cc	AtomID.hh
facts / FACTSPotential.hh	AtomID.fwd.hh
func / FourPointsFunc.cc	AtomID.hh
GenBornPotential.cc	AtomID.hh
GenBornPotential.hh	AtomID.fwd.hh
geometric_solvation / GeometricSolEnergyEvaluator.cc	AtomID.hh
geometric_solvation / GeometricSolEnergyEvaluator.hh	AtomID.fwd.hh
hbonds / HBondSet.cc	AtomID.hh
hbonds / HBondSet.hh	AtomID.fwd.hh
packing / HolesEnergyRes.cc	CacheableAtomID_MapVector.hh
constraints / KofNConstraint.cc	SequenceMapping.fwd.hh
lddt.cc	AtomID.hh
lddt.hh	AtomID.hh
packstat / LeeRichards.hh	AtomID.hh
packstat / LeeRichards.hh	AtomID_Map.hh
sasa / LeGrandSasa.cc	AtomID.hh
sasa / LeGrandSasa.cc	AtomID_Map.hh
sasa / LeGrandSasa.hh	AtomID_Map.fwd.hh
constraints / LocalCoordinateConstraint.cc	AtomID.hh
constraints / LocalCoordinateConstraint.cc	NamedStubID.hh
constraints / LocalCoordinateConstraint.cc	SequenceMapping.hh
constraints / LocalCoordinateConstraint.hh	AtomID.hh
loop_graph / evaluator / LoopClosePotentialEvaluator.hh	AtomID.hh
constraints / MembraneSpanConstraint.cc	SequenceMapping.hh
constraints / MembraneSpanConstraint.hh	AtomID.hh
constraints / MembraneSpanTermZConstraint.cc	SequenceMapping.hh
constraints / MembraneSpanTermZConstraint.hh	AtomID.hh
MinimizationGraph.hh	DOF_ID.fwd.hh
MinimizationGraph.hh	TorsionID.fwd.hh
methods / MMBondAngleEnergy.cc	AtomID.hh
mm / MMBondAngleResidueTypeParamSet.hh	AtomID.fwd.hh
methods / MMBondLengthEnergy.cc	AtomID.hh
methods / MMTorsionEnergy.cc	AtomID.hh
constraints / MultiConstraint.cc	SequenceMapping.hh
constraints / MultiConstraint.hh	AtomID.hh
MultipoleElecPotential.cc	AtomID.hh
MultipoleElecPotential.hh	AtomID.hh
constraints / NamedAngleConstraint.cc	AtomID.hh
constraints / NamedAngleConstraint.cc	Exceptions.hh
constraints / NamedAngleConstraint.cc	NamedAtomID.hh
constraints / NamedAngleConstraint.cc	SequenceMapping.hh
constraints / NamedAngleConstraint.hh	NamedAtomID.hh
constraints / NamedAtomPairConstraint.cc	AtomID.hh
constraints / NamedAtomPairConstraint.cc	Exceptions.hh
constraints / NamedAtomPairConstraint.cc	NamedAtomID.hh
constraints / NamedAtomPairConstraint.cc	SequenceMapping.hh
constraints / NamedAtomPairConstraint.hh	NamedAtomID.hh
constraints / NamedDihedralConstraint.cc	AtomID.hh
constraints / NamedDihedralConstraint.cc	NamedAtomID.hh
constraints / NamedDihedralConstraint.cc	SequenceMapping.hh
constraints / NamedDihedralConstraint.hh	NamedAtomID.hh
NeighborList.hh	AtomID.hh
nmer / NMerPSSMEnergy.hh	DOF_ID.fwd.hh
nmer / NMerPSSMEnergy.hh	TorsionID.fwd.hh
nmer / NMerRefEnergy.hh	DOF_ID.fwd.hh
nmer / NMerRefEnergy.hh	TorsionID.fwd.hh
nmer / NMerSVMEnergy.hh	DOF_ID.fwd.hh
nmer / NMerSVMEnergy.hh	TorsionID.fwd.hh
nmr / NMRGridSearch.hh	AtomID.hh
constraints / NonResidueTypeConstraint.cc	SequenceMapping.hh
constraints / NonResidueTypeConstraint.hh	AtomID.hh
hbonds / NPDHBondSet.cc	AtomID.hh
hbonds / NPDHBondSet.hh	AtomID_Map.hh
OmegaTether.cc	types.hh
methods / OneBodyEnergy.cc	PartialAtomID.hh
methods / OneBodyEnergy.hh	DOF_ID.fwd.hh
methods / OneBodyEnergy.hh	PartialAtomID.fwd.hh
methods / OneBodyEnergy.hh	TorsionID.fwd.hh
orbitals / OrbitalsScore.cc	AtomID.hh
orbitals / OrbitalsScore.hh	AtomID.fwd.hh
P_AA.cc	TorsionID.hh
P_AA.hh	TorsionID.fwd.hh
nmr / pcs / PCSData.cc	AtomID.hh
nmr / pcs / PCSData.cc	NamedAtomID.hh
nmr / pcs / PCSSingle.cc	AtomID.hh
nmr / pcs / PCSSingle.hh	AtomID.hh
nmr / pcs / PCSSingleSet.cc	AtomID.hh
PoissonBoltzmannPotential.hh	AtomID_Map.fwd.hh
packing / PoseBalls.hh	AtomID.hh
packing / PoseBalls.hh	AtomID_Map.hh
packing / PoseBalls.hh	AtomID_Mask.fwd.hh
packing / PoseBallsLite.hh	AtomID.hh
packing / PoseBallsLite.hh	AtomID_Map.hh
packing / PoseBallsLite.hh	AtomID_Mask.fwd.hh
nmr / pre / PREData.cc	AtomID.hh
nmr / pre / PREData.cc	NamedAtomID.hh
nmr / pre / PRESingle.cc	AtomID.hh
nmr / pre / PRESingle.hh	AtomID.hh
RamaPrePro.cc	PartialAtomID.hh
RamaPrePro.hh	PartialAtomID.fwd.hh
nmr / rdc / RDCMultiSet.cc	AtomID.hh
nmr / rdc / RDCSingle.cc	AtomID.hh
nmr / rdc / RDCSingle.hh	AtomID.hh
nmr / rdc / RDCSingleSet.cc	AtomID.hh
constraints / ResidueCouplingConstraint.cc	AtomID.hh
constraints / ResidueTypeConstraint.cc	SequenceMapping.hh
constraints / ResidueTypeConstraint.hh	AtomID.hh
constraints / ResidueTypeLinkingConstraint.hh	AtomID.hh
rms_util.cc	AtomID.hh
rms_util.cc	AtomID_Map.hh
rms_util.hh	AtomID.fwd.hh
rms_util.hh	AtomID_Map.fwd.hh
rms_util.tmpl.hh	SequenceMapping.hh
rna / chemical_shift / RNA_ChemicalShiftPotential.cc	AtomID.hh
rna / chemical_shift / RNA_ChemicalShiftPotential.hh	AtomID.fwd.hh
rna / data / RNA_DMS_Potential.cc	AtomID.hh
rna / RNA_LowResolutionPotential.cc	AtomID.hh
rna / RNA_LowResolutionPotential.hh	AtomID.fwd.hh
rna / RNA_SuitePotential.cc	TorsionID.hh
rna / RNA_SuitePotential.hh	TorsionID.fwd.hh
rna / RNA_TorsionPotential.cc	TorsionID.hh
rna / RNA_TorsionPotential.hh	AtomID.fwd.hh
rna / RNA_TorsionPotential.hh	TorsionID.fwd.hh
constraints / RTConstraint.cc	NamedAtomID.hh
constraints / RTConstraint.cc	SequenceMapping.hh
constraints / RTConstraint.hh	AtomID.hh
sasa.cc	AtomID.hh
sasa.cc	AtomID_Map.hh
sasa.hh	AtomID_Map.fwd.hh
sasa / SasaCalc.hh	AtomID_Map.hh
sasa / SasaMethod.hh	AtomID_Map.fwd.hh
ScoreFunction.cc	DOF_ID.hh
ScoreFunction.cc	TorsionID.hh
ScoreFunction.hh	AtomID.fwd.hh
ScoreFunction.hh	DOF_ID.fwd.hh
ScoreFunction.hh	TorsionID.fwd.hh
aa_composition_energy / SequenceConstraint.hh	AtomID.hh
constraints / SequenceProfileConstraint.cc	SequenceMapping.hh
constraints / SequenceProfileConstraint.hh	AtomID.hh
constraints / SequenceProfileConstraint.hh	SequenceMapping.fwd.hh
constraints / SiteConstraint.cc	AtomID.hh
constraints / SiteConstraintResidues.cc	AtomID.hh
loop_graph / evaluator / SixDTransRotPotentialEvaluator.cc	AtomID.hh
loop_graph / evaluator / SixDTransRotPotentialEvaluator.hh	AtomID.hh
packing / surf_vol.hh	AtomID_Map.hh
packing / surf_vol.hh	AtomID_Mask.fwd.hh
rna / TNA_SuitePotential.hh	TorsionID.hh
methods / TwoBodyEnergy.cc	PartialAtomID.hh
methods / TwoBodyEnergy.hh	DOF_ID.fwd.hh
methods / TwoBodyEnergy.hh	PartialAtomID.fwd.hh
methods / TwoBodyEnergy.hh	TorsionID.fwd.hh
packstat / types.hh	AtomID.hh
fiber_diffraction / util.cc	AtomID.hh
methods / util.cc	AtomID.hh
util.cc	AtomID.hh
loop_graph / util.cc	AtomID.hh
sasa / util.cc	AtomID.hh
dssp / util.cc	AtomID.hh
nmr / util.cc	AtomID.hh
sasa / util.cc	AtomID_Map.hh
nmr / util.cc	Exceptions.hh
nmr / util.cc	NamedAtomID.hh
constraints / util.cc	SequenceMapping.hh
carbohydrates / util.cc	types.hh
nmr / util.hh	AtomID.fwd.hh
methods / util.hh	AtomID.fwd.hh
fiber_diffraction / util.hh	AtomID.fwd.hh
util.hh	AtomID.fwd.hh
loop_graph / util.hh	AtomID.fwd.hh
sasa / util.hh	AtomID_Map.fwd.hh
atomic_depth / util.hh	AtomID_Map.hh
motif / util.hh	AtomID_Mask.fwd.hh
carbohydrates / util.hh	types.hh
func / XYZ_Func.cc	AtomID.hh
func / XYZ_Func.hh	AtomID.fwd.hh
vdwaals / VDW_Energy.cc	AtomID.hh