Rosetta
src
protocols
antibody
antibody → core Relation
File in src/protocols/antibody
Includes file in src/core
Ab_TemplateInfo.cc
import_pose
/
import_pose.hh
Ab_TemplateInfo.hh
pose
/
Pose.hh
AntibodyCDRGrafter.cc
import_pose
/
import_pose.hh
AntibodyCDRGrafter.cc
pose
/
Pose.hh
AntibodyCDRGrafter.cc
scoring
/
ScoreFunction.hh
AntibodyCDRGrafter.cc
scoring
/
ScoreFunctionFactory.hh
AntibodyCDRGrafter.hh
pose
/
Pose.fwd.hh
AntibodyCDRGrafter.hh
scoring
/
ScoreFunction.fwd.hh
AntibodyEnumManager.cc
types.hh
AntibodyFeatures.cc
pose
/
Pose.hh
AntibodyFeatures.cc
conformation
/
Residue.hh
AntibodyFeatures.cc
scoring
/
ScoreFunction.hh
AntibodyInfo.cc
pose
/
datacache
/
CacheableDataType.hh
AntibodyInfo.cc
pose
/
chains_util.hh
AntibodyInfo.cc
conformation
/
Conformation.hh
AntibodyInfo.cc
pose
/
PDBInfo.hh
AntibodyInfo.cc
pose
/
Pose.hh
AntibodyInfo.cc
scoring
/
ScoreFunction.hh
AntibodyInfo.cc
scoring
/
ScoreFunctionFactory.hh
AntibodyInfo.cc
scoring
/
ScoreType.hh
AntibodyInfo.cc
pack
/
task
/
TaskFactory.hh
AntibodyInfo.cc
pose
/
util.hh
AntibodyInfo.hh
kinematics
/
FoldTree.hh
AntibodyInfo.hh
kinematics
/
MoveMap.hh
AntibodyInfo.hh
scoring
/
ScoreFunction.fwd.hh
AntibodyInfo.hh
pack
/
task
/
TaskFactory.fwd.hh
AntibodyModelerProtocol.cc
chemical
/
ChemicalManager.fwd.hh
AntibodyModelerProtocol.cc
scoring
/
Energies.hh
AntibodyModelerProtocol.cc
pose
/
extra_pose_info_util.hh
AntibodyModelerProtocol.cc
import_pose
/
import_pose.hh
AntibodyModelerProtocol.cc
pose
/
PDBInfo.hh
AntibodyModelerProtocol.cc
conformation
/
Residue.hh
AntibodyModelerProtocol.cc
chemical
/
ResidueType.hh
AntibodyModelerProtocol.cc
scoring
/
ScoreFunction.hh
AntibodyModelerProtocol.cc
scoring
/
ScoreFunctionFactory.hh
AntibodyModelerProtocol.cc
scoring
/
ScoreType.hh
AntibodyModelerProtocol.hh
pose
/
Pose.fwd.hh
AntibodyModelerProtocol.hh
scoring
/
ScoreFunction.fwd.hh
AntibodyModelerProtocol.hh
types.hh
AntibodyNumberingConverterMover.cc
pose
/
chains_util.hh
AntibodyNumberingConverterMover.cc
pose
/
PDBInfo.hh
AntibodyNumberingConverterMover.cc
pose
/
Pose.hh
AntibodyNumberingConverterMover.hh
pose
/
Pose.fwd.hh
AntibodyNumberingParser.hh
types.hh
CDRsMinPackMin.cc
kinematics
/
MoveMap.hh
CDRsMinPackMin.cc
pose
/
Pose.hh
CDRsMinPackMin.cc
scoring
/
ScoreFunction.hh
CDRsMinPackMin.cc
scoring
/
ScoreFunctionFactory.hh
CDRsMinPackMin.cc
pack
/
task
/
TaskFactory.hh
CDRsMinPackMin.hh
kinematics
/
MoveMap.fwd.hh
CDRsMinPackMin.hh
pose
/
Pose.fwd.hh
CDRsMinPackMin.hh
scoring
/
ScoreFunction.fwd.hh
CDRsMinPackMin.hh
pack
/
task
/
TaskFactory.fwd.hh
CDRsMinPackMin.hh
types.hh
CloseOneCDRLoop.cc
kinematics
/
FoldTree.hh
CloseOneCDRLoop.cc
kinematics
/
MoveMap.hh
CloseOneCDRLoop.cc
pose
/
Pose.hh
CloseOneCDRLoop.cc
conformation
/
Residue.hh
CloseOneCDRLoop.hh
kinematics
/
MoveMap.fwd.hh
CloseOneCDRLoop.hh
pose
/
Pose.fwd.hh
GraftCDRLoopsProtocol.cc
pose
/
extra_pose_info_util.hh
GraftCDRLoopsProtocol.cc
import_pose
/
import_pose.hh
GraftCDRLoopsProtocol.cc
pose
/
PDBInfo.hh
GraftCDRLoopsProtocol.cc
conformation
/
Residue.hh
GraftCDRLoopsProtocol.cc
scoring
/
ScoreFunction.hh
GraftCDRLoopsProtocol.cc
scoring
/
ScoreFunctionFactory.hh
GraftCDRLoopsProtocol.cc
scoring
/
ScoreType.hh
GraftCDRLoopsProtocol.cc
pack
/
task
/
TaskFactory.fwd.hh
GraftCDRLoopsProtocol.hh
pose
/
Pose.fwd.hh
GraftCDRLoopsProtocol.hh
scoring
/
ScoreFunction.fwd.hh
GraftCDRLoopsProtocol.hh
pack
/
task
/
TaskFactory.fwd.hh
GraftedStemOptimizer.cc
kinematics
/
FoldTree.hh
GraftedStemOptimizer.cc
kinematics
/
MoveMap.hh
GraftedStemOptimizer.cc
pose
/
Pose.hh
GraftedStemOptimizer.cc
scoring
/
ScoreFunction.hh
GraftedStemOptimizer.cc
scoring
/
ScoreFunctionFactory.hh
GraftedStemOptimizer.cc
pack
/
task
/
TaskFactory.hh
GraftedStemOptimizer.cc
select
/
util.hh
GraftedStemOptimizer.hh
kinematics
/
FoldTree.fwd.hh
GraftedStemOptimizer.hh
kinematics
/
MoveMap.fwd.hh
GraftedStemOptimizer.hh
scoring
/
ScoreFunction.fwd.hh
GraftedStemOptimizer.hh
pack
/
task
/
TaskFactory.fwd.hh
GraftOneCDRLoop.cc
id
/
AtomID_Map.hh
GraftOneCDRLoop.cc
pose
/
init_id_map.hh
GraftOneCDRLoop.cc
scoring
/
rms_util.hh
GraftOneCDRLoop.cc
scoring
/
ScoreFunctionFactory.hh
GraftOneCDRLoop.hh
pose
/
Pose.fwd.hh
GraftOneCDRLoop.hh
scoring
/
ScoreFunction.fwd.hh
H3CterInsert.cc
fragment
/
BBTorsionSRFD.hh
H3CterInsert.cc
kinematics
/
FoldTree.hh
H3CterInsert.cc
pose
/
Pose.hh
H3CterInsert.hh
fragment
/
FragData.hh
H3PerturbCCD.cc
kinematics
/
FoldTree.hh
H3PerturbCCD.cc
fragment
/
FragSet.hh
H3PerturbCCD.cc
fragment
/
Frame.hh
H3PerturbCCD.cc
fragment
/
FrameList.hh
H3PerturbCCD.cc
pose
/
Pose.hh
H3PerturbCCD.cc
conformation
/
Residue.hh
H3PerturbCCD.cc
scoring
/
ScoreFunction.hh
H3PerturbCCD.cc
scoring
/
ScoreFunctionFactory.hh
H3PerturbCCD.cc
pose
/
variant_util.hh
H3PerturbCCD.cc
chemical
/
VariantType.hh
H3PerturbCCD.hh
fragment
/
FragSet.fwd.hh
H3PerturbCCD.hh
pose
/
Pose.fwd.hh
H3PerturbCCD.hh
scoring
/
ScoreFunction.hh
H3RefineCCD.cc
kinematics
/
MoveMap.hh
H3RefineCCD.cc
pack
/
task
/
operation
/
NoRepackDisulfides.fwd.hh
H3RefineCCD.cc
pose
/
Pose.hh
H3RefineCCD.cc
scoring
/
ScoreFunction.hh
H3RefineCCD.cc
scoring
/
ScoreFunctionFactory.hh
H3RefineCCD.cc
pack
/
task
/
TaskFactory.hh
H3RefineCCD.cc
chemical
/
VariantType.hh
H3RefineCCD.hh
kinematics
/
MoveMap.fwd.hh
H3RefineCCD.hh
pose
/
Pose.hh
H3RefineCCD.hh
scoring
/
ScoreFunction.hh
H3RefineCCD.hh
pack
/
task
/
TaskFactory.fwd.hh
LHRepulsiveRamp.cc
kinematics
/
MoveMap.hh
LHRepulsiveRamp.cc
pose
/
Pose.fwd.hh
LHRepulsiveRamp.cc
scoring
/
ScoreFunction.hh
LHRepulsiveRamp.cc
pack
/
task
/
TaskFactory.hh
LHRepulsiveRamp.hh
scoring
/
ScoreFunction.hh
LHRepulsiveRamp.hh
pack
/
task
/
TaskFactory.fwd.hh
metrics.cc
scoring
/
Energies.hh
metrics.cc
scoring
/
methods
/
EnergyMethodOptions.hh
metrics.cc
scoring
/
hbonds
/
HBondOptions.hh
metrics.cc
pose
/
init_id_map.hh
metrics.cc
pose
/
PDBInfo.hh
metrics.cc
pose
/
Pose.hh
metrics.cc
conformation
/
Residue.hh
metrics.cc
scoring
/
rms_util.hh
metrics.cc
scoring
/
sasa
/
SasaCalc.hh
metrics.cc
scoring
/
ScoreFunction.hh
metrics.cc
sequence
/
Sequence.hh
metrics.cc
id
/
SequenceMapping.hh
metrics.cc
sequence
/
util.hh
metrics.hh
pose
/
Pose.fwd.hh
metrics.hh
scoring
/
ScoreFunction.fwd.hh
metrics.hh
types.hh
RefineBetaBarrel.cc
pose
/
Pose.hh
RefineBetaBarrel.cc
scoring
/
ScoreFunction.hh
RefineBetaBarrel.cc
scoring
/
ScoreFunctionFactory.hh
RefineBetaBarrel.cc
pack
/
task
/
TaskFactory.hh
RefineBetaBarrel.hh
kinematics
/
MoveMap.fwd.hh
RefineBetaBarrel.hh
scoring
/
ScoreFunction.fwd.hh
RefineBetaBarrel.hh
pack
/
task
/
TaskFactory.fwd.hh
util.cc
scoring
/
constraints
/
AngleConstraint.hh
util.cc
id
/
AtomID_Map.hh
util.cc
scoring
/
constraints
/
AtomPairConstraint.hh
util.cc
pose
/
chains_util.hh
util.cc
scoring
/
constraints
/
DihedralConstraint.hh
util.cc
scoring
/
func
/
FlatHarmonicFunc.hh
util.cc
kinematics
/
FoldTree.hh
util.cc
pose
/
init_id_map.hh
util.cc
pack
/
task
/
operation
/
NoRepackDisulfides.hh
util.cc
pack
/
task
/
operation
/
OperateOnCertainResidues.hh
util.cc
pose
/
PDBInfo.hh
util.cc
pose
/
Pose.hh
util.cc
pack
/
task
/
operation
/
ResFilters.hh
util.cc
pack
/
task
/
operation
/
ResLvlTaskOperations.hh
util.cc
scoring
/
rms_util.hh
util.cc
scoring
/
rms_util.tmpl.hh
util.cc
pack
/
dunbrack
/
RotamerConstraint.hh
util.cc
pack
/
task
/
TaskFactory.hh
util.cc
pack
/
task
/
operation
/
TaskOperations.hh
util.cc
types.hh
util.cc
pack
/
rotamer_set
/
UnboundRotamersOperation.hh
util.hh
pose
/
Pose.fwd.hh
util.hh
pack
/
task
/
TaskFactory.fwd.hh
util.hh
types.hh
clusters
/
CDRCluster.cc
pose
/
Pose.hh
clusters
/
CDRCluster.cc
pose
/
PDBInfo.hh
clusters
/
CDRCluster.hh
types.hh
clusters
/
CDRCluster.hh
pose
/
Pose.fwd.hh
clusters
/
CDRClusterFeatures.hh
pose
/
Pose.fwd.hh
clusters
/
CDRClusterFeatures.hh
types.hh
clusters
/
CDRClusterMatcher.cc
pose
/
Pose.hh
clusters
/
CDRClusterMatcher.cc
types.hh
clusters
/
CDRClusterMatcher.hh
pose
/
Pose.fwd.hh
clusters
/
CDRClusterMatcher.hh
types.hh
clusters
/
CDRClusterSet.cc
pose
/
Pose.hh
clusters
/
CDRClusterSet.cc
pose
/
datacache
/
CacheableDataType.hh
clusters
/
CDRClusterSet.hh
pose
/
Pose.fwd.hh
clusters
/
CDRClusterSet.hh
types.hh
clusters
/
util.cc
types.hh
clusters
/
util.cc
pose
/
Pose.hh
clusters
/
util.cc
pose
/
chains_util.hh
clusters
/
util.cc
pose
/
extra_pose_info_util.hh
clusters
/
util.cc
pose
/
PDBInfo.hh
clusters
/
util.cc
pose
/
datacache
/
CacheableDataType.hh
clusters
/
util.cc
conformation
/
Residue.hh
clusters
/
util.hh
pose
/
Pose.fwd.hh
clusters
/
util.hh
types.hh
constraints
/
CDRDihedralConstraintMover.cc
pose
/
Pose.hh
constraints
/
CDRDihedralConstraintMover.cc
pose
/
datacache
/
CacheableDataType.hh
constraints
/
CDRDihedralConstraintMover.cc
scoring
/
constraints
/
ConstraintIO.hh
constraints
/
CDRDihedralConstraintMover.cc
scoring
/
constraints
/
ConstraintSet.hh
constraints
/
CDRDihedralConstraintMover.hh
pose
/
Pose.fwd.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.cc
scoring
/
constraints
/
SiteConstraint.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.cc
scoring
/
constraints
/
ConstraintSet.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.cc
scoring
/
func
/
FlatHarmonicFunc.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.cc
pose
/
Pose.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.cc
select
/
residue_selector
/
ReturnResidueSubsetSelector.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.cc
select
/
residue_selector
/
ResidueIndexSelector.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.hh
scoring
/
constraints
/
SiteConstraint.fwd.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.hh
scoring
/
func
/
Func.fwd.hh
constraints
/
ParatopeEpitopeSiteConstraintMover.hh
select
/
residue_selector
/
ResidueSelector.fwd.hh
constraints
/
ParatopeSiteConstraintMover.cc
scoring
/
constraints
/
SiteConstraint.hh
constraints
/
ParatopeSiteConstraintMover.cc
scoring
/
constraints
/
ConstraintSet.hh
constraints
/
ParatopeSiteConstraintMover.cc
scoring
/
func
/
FlatHarmonicFunc.hh
constraints
/
ParatopeSiteConstraintMover.cc
pose
/
Pose.hh
constraints
/
ParatopeSiteConstraintMover.cc
select
/
residue_selector
/
ReturnResidueSubsetSelector.hh
constraints
/
ParatopeSiteConstraintMover.cc
select
/
residue_selector
/
ResidueIndexSelector.hh
constraints
/
ParatopeSiteConstraintMover.hh
pose
/
Pose.fwd.hh
constraints
/
ParatopeSiteConstraintMover.hh
scoring
/
func
/
Func.fwd.hh
constraints
/
ParatopeSiteConstraintMover.hh
scoring
/
constraints
/
SiteConstraint.fwd.hh
constraints
/
ParatopeSiteConstraintMover.hh
select
/
residue_selector
/
ResidueSelector.fwd.hh
constraints
/
util.cc
conformation
/
Residue.hh
constraints
/
util.cc
id
/
AtomID.hh
constraints
/
util.cc
scoring
/
constraints
/
Constraint.hh
constraints
/
util.cc
scoring
/
constraints
/
ConstraintSet.hh
constraints
/
util.cc
scoring
/
constraints
/
DihedralConstraint.hh
constraints
/
util.cc
scoring
/
func
/
CircularHarmonicFunc.hh
constraints
/
util.cc
pose
/
Pose.hh
constraints
/
util.cc
types.hh
constraints
/
util.hh
pose
/
Pose.fwd.hh
constraints
/
util.hh
types.hh
database
/
AntibodyDatabaseManager.cc
pose
/
Pose.hh
database
/
AntibodyDatabaseManager.cc
pose
/
datacache
/
CacheableDataType.hh
database
/
AntibodyDatabaseManager.cc
conformation
/
Conformation.hh
database
/
AntibodyDatabaseManager.cc
chemical
/
AA.hh
database
/
AntibodyDatabaseManager.hh
pose
/
Pose.fwd.hh
database
/
CDRSetOptions.hh
types.hh
database
/
CDRSetOptionsParser.hh
types.hh
design
/
AntibodyDesignMover.cc
scoring
/
ScoreFunction.hh
design
/
AntibodyDesignMover.cc
pose
/
Pose.hh
design
/
AntibodyDesignMover.cc
pose
/
datacache
/
CacheableDataType.hh
design
/
AntibodyDesignMover.cc
optimization
/
MinimizerOptions.hh
design
/
AntibodyDesignMover.cc
pose
/
PDBInfo.hh
design
/
AntibodyDesignMover.cc
pose
/
extra_pose_info_util.hh
design
/
AntibodyDesignMover.cc
pack
/
task
/
TaskFactory.hh
design
/
AntibodyDesignMover.hh
pose
/
Pose.fwd.hh
design
/
AntibodyDesignMover.hh
scoring
/
ScoreFunction.fwd.hh
design
/
AntibodyDesignMover.hh
types.hh
design
/
AntibodySeqDesignTFCreator.cc
pose
/
Pose.hh
design
/
AntibodySeqDesignTFCreator.cc
pack
/
task
/
operation
/
NoRepackDisulfides.hh
design
/
AntibodySeqDesignTFCreator.cc
pack
/
task
/
operation
/
TaskOperations.hh
design
/
AntibodySeqDesignTFCreator.cc
pack
/
task
/
operation
/
ResLvlTaskOperations.hh
design
/
AntibodySeqDesignTFCreator.cc
pack
/
task
/
operation
/
OperateOnCertainResidues.hh
design
/
AntibodySeqDesignTFCreator.cc
chemical
/
AA.hh
design
/
AntibodySeqDesignTFCreator.cc
conformation
/
Residue.hh
design
/
AntibodySeqDesignTFCreator.cc
pack
/
task
/
TaskFactory.hh
design
/
AntibodySeqDesignTFCreator.hh
pack
/
task
/
TaskFactory.fwd.hh
design
/
AntibodySeqDesignTFCreator.hh
pose
/
Pose.fwd.hh
design
/
AntibodySeqDesignTFCreator.hh
types.hh
design
/
CDRGraftDesignOptions.hh
types.hh
design
/
CDRSeqDesignOptions.hh
chemical
/
AA.hh
design
/
CDRSeqDesignOptions.hh
types.hh
design
/
GeneralAntibodyModeler.cc
pose
/
Pose.hh
design
/
GeneralAntibodyModeler.cc
pose
/
chains_util.hh
design
/
GeneralAntibodyModeler.cc
scoring
/
ScoreType.hh
design
/
GeneralAntibodyModeler.cc
kinematics
/
MoveMap.hh
design
/
GeneralAntibodyModeler.cc
scoring
/
ScoreFunction.hh
design
/
GeneralAntibodyModeler.cc
scoring
/
ScoreFunctionFactory.hh
design
/
GeneralAntibodyModeler.cc
scoring
/
constraints
/
util.hh
design
/
GeneralAntibodyModeler.cc
optimization
/
MinimizerOptions.hh
design
/
GeneralAntibodyModeler.cc
pack
/
task
/
TaskFactory.hh
design
/
GeneralAntibodyModeler.cc
pack
/
task
/
PackerTask.hh
design
/
GeneralAntibodyModeler.cc
pack
/
task
/
operation
/
TaskOperations.hh
design
/
GeneralAntibodyModeler.cc
kinematics
/
MoveMap.fwd.hh
design
/
GeneralAntibodyModeler.hh
pack
/
task
/
TaskFactory.fwd.hh
design
/
GeneralAntibodyModeler.hh
pack
/
task
/
PackerTask.fwd.hh
design
/
GeneralAntibodyModeler.hh
pack
/
task
/
operation
/
TaskOperations.fwd.hh
design
/
GeneralAntibodyModeler.hh
pose
/
Pose.fwd.hh
design
/
GeneralAntibodyModeler.hh
kinematics
/
MoveMap.fwd.hh
design
/
GeneralAntibodyModeler.hh
scoring
/
ScoreFunction.fwd.hh
design
/
GeneralAntibodyModeler.hh
types.hh
design
/
MutateFrameworkForCluster.cc
pose
/
Pose.hh
design
/
MutateFrameworkForCluster.cc
pose
/
datacache
/
CacheableDataType.hh
design
/
MutateFrameworkForCluster.cc
pack
/
task
/
TaskFactory.hh
design
/
MutateFrameworkForCluster.cc
pack
/
task
/
PackerTask.hh
design
/
MutateFrameworkForCluster.cc
pack
/
task
/
operation
/
TaskOperations.hh
design
/
MutateFrameworkForCluster.cc
select
/
residue_selector
/
NeighborhoodResidueSelector.hh
design
/
MutateFrameworkForCluster.cc
scoring
/
ScoreFunction.fwd.hh
design
/
MutateFrameworkForCluster.cc
scoring
/
ScoreFunctionFactory.hh
design
/
MutateFrameworkForCluster.cc
pack
/
task
/
ResidueLevelTask.hh
design
/
MutateFrameworkForCluster.hh
pose
/
Pose.fwd.hh
design
/
MutateFrameworkForCluster.hh
scoring
/
ScoreFunction.fwd.hh
design
/
NativeAntibodySeq.cc
pose
/
Pose.hh
design
/
NativeAntibodySeq.cc
pose
/
PDBInfo.hh
design
/
NativeAntibodySeq.cc
pose
/
datacache
/
CacheableDataType.hh
design
/
NativeAntibodySeq.hh
pose
/
Pose.fwd.hh
design
/
NativeAntibodySeq.hh
chemical
/
AA.hh
design
/
ResnumFromStringsWithRangesSelector.cc
pose
/
Pose.fwd.hh
design
/
ResnumFromStringsWithRangesSelector.hh
select
/
residue_selector
/
ResidueSelector.hh
design
/
ResnumFromStringsWithRangesSelector.hh
pose
/
Pose.fwd.hh
design
/
util.cc
pose
/
Pose.hh
design
/
util.cc
pose
/
PDBInfo.hh
design
/
util.cc
pose
/
chains_util.hh
design
/
util.cc
pack
/
task
/
operation
/
TaskOperations.hh
design
/
util.cc
scoring
/
ScoreFunction.hh
design
/
util.cc
scoring
/
ScoreFunctionFactory.hh
design
/
util.cc
pose
/
datacache
/
CacheableDataType.hh
design
/
util.hh
pose
/
Pose.fwd.hh
design
/
util.hh
scoring
/
ScoreFunction.fwd.hh
design
/
util.hh
pack
/
task
/
operation
/
TaskOperations.fwd.hh
design
/
util.hh
types.hh
residue_selector
/
AntibodyRegionSelector.cc
pose
/
Pose.hh
residue_selector
/
AntibodyRegionSelector.cc
select
/
residue_selector
/
util.hh
residue_selector
/
AntibodyRegionSelector.hh
select
/
residue_selector
/
ResidueSelector.hh
residue_selector
/
AntibodyRegionSelector.hh
pose
/
Pose.fwd.hh
residue_selector
/
AntibodyRegionSelectorCreator.hh
select
/
residue_selector
/
ResidueSelectorCreator.hh
residue_selector
/
CDRResidueSelector.cc
select
/
residue_selector
/
util.hh
residue_selector
/
CDRResidueSelector.cc
pose
/
Pose.hh
residue_selector
/
CDRResidueSelector.hh
select
/
residue_selector
/
ResidueSelector.hh
residue_selector
/
CDRResidueSelector.hh
pose
/
Pose.fwd.hh
residue_selector
/
CDRResidueSelectorCreator.hh
select
/
residue_selector
/
ResidueSelectorCreator.hh
snugdock
/
SnugDock.cc
pose
/
Pose.hh
snugdock
/
SnugDock.cc
scoring
/
ScoreFunction.hh
snugdock
/
SnugDock.cc
scoring
/
ScoreFunctionFactory.hh
snugdock
/
SnugDock.cc
types.hh
snugdock
/
SnugDock.cc
kinematics
/
MoveMap.hh
snugdock
/
SnugDock.cc
pack
/
task
/
TaskFactory.hh
snugdock
/
SnugDock.hh
pack
/
task
/
TaskFactory.fwd.hh
snugdock
/
SnugDockProtocol.cc
pose
/
Pose.hh
snugdock
/
SnugDockProtocol.cc
pose
/
PDBInfo.hh
snugdock
/
SnugDockProtocol.cc
pose
/
util.hh
snugdock
/
SnugDockProtocol.cc
pose
/
chains_util.hh
snugdock
/
SnugDockProtocol.cc
conformation
/
ResidueFactory.hh
snugdock
/
SnugDockProtocol.cc
conformation
/
Residue.hh
snugdock
/
SnugDockProtocol.cc
scoring
/
ScoreFunctionFactory.hh
snugdock
/
SnugDockProtocol.cc
scoring
/
ScoreFunction.hh
snugdock
/
SnugDockProtocol.cc
pack
/
task
/
TaskFactory.hh
snugdock
/
SnugDockProtocol.cc
pack
/
task
/
operation
/
TaskOperations.hh
snugdock
/
SnugDockProtocol.cc
pack
/
task
/
operation
/
NoRepackDisulfides.hh
snugdock
/
SnugDockProtocol.cc
pack
/
task
/
operation
/
OperateOnResidueSubset.hh
snugdock
/
SnugDockProtocol.cc
pack
/
task
/
operation
/
ResLvlTaskOperations.hh
snugdock
/
SnugDockProtocol.cc
select
/
util
/
interface_vector_calculate.hh
snugdock
/
SnugDockProtocol.hh
conformation
/
Residue.fwd.hh
snugdock
/
SnugDockProtocol.hh
pose
/
PDBInfo.fwd.hh
snugdock
/
SnugDockProtocol.hh
pack
/
task
/
TaskFactory.fwd.hh
task_operations
/
AddCDRProfileSetsOperation.cc
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
AddCDRProfileSetsOperation.cc
chemical
/
AA.hh
task_operations
/
AddCDRProfileSetsOperation.cc
pack
/
task
/
operation
/
task_op_schemas.hh
task_operations
/
AddCDRProfileSetsOperation.hh
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
AddCDRProfileSetsOperationCreator.hh
pack
/
task
/
operation
/
TaskOperationCreator.hh
task_operations
/
AddCDRProfilesOperation.cc
pack
/
task
/
operation
/
TaskOperations.hh
task_operations
/
AddCDRProfilesOperation.cc
pack
/
task
/
operation
/
task_op_schemas.hh
task_operations
/
AddCDRProfilesOperation.hh
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
AddCDRProfilesOperation.hh
chemical
/
AA.hh
task_operations
/
AddCDRProfilesOperation.hh
types.hh
task_operations
/
AddCDRProfilesOperationCreator.hh
pack
/
task
/
operation
/
TaskOperationCreator.hh
task_operations
/
DisableAntibodyRegionOperation.cc
pose
/
Pose.hh
task_operations
/
DisableAntibodyRegionOperation.cc
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
DisableAntibodyRegionOperation.cc
pack
/
task
/
operation
/
TaskOperations.hh
task_operations
/
DisableAntibodyRegionOperation.cc
pack
/
task
/
operation
/
task_op_schemas.hh
task_operations
/
DisableAntibodyRegionOperation.hh
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
DisableAntibodyRegionOperationCreator.hh
pack
/
task
/
operation
/
TaskOperationCreator.hh
task_operations
/
DisableCDRsOperation.cc
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
DisableCDRsOperation.cc
pack
/
task
/
operation
/
TaskOperations.hh
task_operations
/
DisableCDRsOperation.cc
pack
/
task
/
operation
/
task_op_schemas.hh
task_operations
/
DisableCDRsOperation.hh
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
DisableCDRsOperationCreator.hh
pack
/
task
/
operation
/
TaskOperationCreator.hh
task_operations
/
RestrictToCDRsAndNeighbors.cc
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
RestrictToCDRsAndNeighbors.cc
pack
/
task
/
operation
/
TaskOperations.hh
task_operations
/
RestrictToCDRsAndNeighbors.cc
pose
/
Pose.hh
task_operations
/
RestrictToCDRsAndNeighbors.cc
pack
/
task
/
operation
/
task_op_schemas.hh
task_operations
/
RestrictToCDRsAndNeighbors.hh
pack
/
task
/
operation
/
TaskOperation.hh
task_operations
/
RestrictToCDRsAndNeighbors.hh
types.hh
task_operations
/
RestrictToCDRsAndNeighborsCreator.hh
pack
/
task
/
operation
/
TaskOperationCreator.hh
Generated on Thu Sep 11 2025 21:36:17 for Rosetta by
1.9.1