antibody → loop_modeling Relation

File in src/protocols/antibody	Includes file in src/protocols/loop_modeling
AntibodyModelerProtocol.cc	LoopProtocol.hh
snugdock / SnugDock.cc	LoopProtocol.hh
snugdock / SnugDockProtocol.cc	LoopProtocol.hh