Rosetta

drug_design → core Relation

File in src/protocols/drug_designIncludes file in src/core
ApplyChemistryMover.ccchemical / AtomRefMapping.hh
ApplyChemistryMover.ccchemical / CacheableResidueTypeSets.hh
ApplyChemistryMover.ccconformation / Conformation.hh
ApplyChemistryMover.ccpose / Pose.hh
ApplyChemistryMover.ccchemical / PoseResidueTypeSet.hh
ApplyChemistryMover.ccselect / residue_selector / ResidueSelector.hh
ApplyChemistryMover.ccpose / selection.hh
ApplyChemistryMover.ccselect / residue_selector / util.hh
ApplyChemistryMover.hhpose / Pose.fwd.hh
ApplyChemistryMover.hhselect / residue_selector / ResidueSelector.fwd.hh
AtomExistsFilter.ccpose / Pose.hh
AtomExistsFilter.ccconformation / Residue.hh
AtomExistsFilter.ccchemical / ResidueType.hh
AtomExistsFilter.ccpose / selection.hh
AtomExistsFilter.ccpose / util.hh
AtomExistsFilter.hhpose / Pose.fwd.hh
AtomExistsFilter.hhtypes.hh
bcl / BCLFragmentBaseMover.ccchemical / Atom.fwd.hh
bcl / BCLFragmentBaseMover.ccchemical / Atom.hh
bcl / BCLFragmentBaseMover.ccchemical / AtomProperties.fwd.hh
bcl / BCLFragmentBaseMover.ccchemical / AtomProperty.hh
bcl / BCLFragmentBaseMover.ccchemical / Bond.hh
bcl / BCLFragmentBaseMover.ccpose / chains_util.hh
bcl / BCLFragmentBaseMover.ccpose / extra_pose_info_util.hh
bcl / BCLFragmentBaseMover.ccio / pdb / pdb_writer.hh
bcl / BCLFragmentBaseMover.ccpose / PDBInfo.hh
bcl / BCLFragmentBaseMover.ccpose / Pose.hh
bcl / BCLFragmentBaseMover.ccconformation / Residue.hh
bcl / BCLFragmentBaseMover.ccchemical / ResidueGraphTypes.hh
bcl / BCLFragmentBaseMover.ccchemical / bcl / util.hh
bcl / BCLFragmentBaseMover.hhchemical / AtomRefMapping.hh
bcl / BCLFragmentBaseMover.hhchemical / bcl / BCLFragmentHandler.hh
bcl / BCLFragmentBaseMover.hhchemical / MutableResidueType.hh
bcl / BCLFragmentBaseMover.hhpose / Pose.fwd.hh
bcl / BCLFragmentBaseMover.hhconformation / Residue.fwd.hh
bcl / BCLFragmentBaseMover.hhchemical / ResidueType.fwd.hh
bcl / BCLFragmentBaseMover.hhchemical / ResidueTypeSet.fwd.hh
bcl / BCLFragmentMutateMover.ccchemical / Atom.fwd.hh
bcl / BCLFragmentMutateMover.ccchemical / Atom.hh
bcl / BCLFragmentMutateMover.ccchemical / AtomProperties.fwd.hh
bcl / BCLFragmentMutateMover.ccchemical / AtomProperty.hh
bcl / BCLFragmentMutateMover.ccchemical / Bond.hh
bcl / BCLFragmentMutateMover.ccpose / chains_util.hh
bcl / BCLFragmentMutateMover.ccpose / extra_pose_info_util.hh
bcl / BCLFragmentMutateMover.ccio / pdb / pdb_writer.hh
bcl / BCLFragmentMutateMover.ccpose / PDBInfo.hh
bcl / BCLFragmentMutateMover.ccpose / Pose.hh
bcl / BCLFragmentMutateMover.ccconformation / Residue.hh
bcl / BCLFragmentMutateMover.ccchemical / ResidueGraphTypes.hh
bcl / BCLFragmentMutateMover.ccchemical / bcl / util.hh
bcl / BCLFragmentMutateMover.hhchemical / AtomRefMapping.hh
bcl / BCLFragmentMutateMover.hhchemical / bcl / BCLFragmentHandler.hh
bcl / BCLFragmentMutateMover.hhchemical / MutableResidueType.hh
bcl / BCLFragmentMutateMover.hhpose / Pose.fwd.hh
bcl / BCLFragmentMutateMover.hhconformation / Residue.fwd.hh
bcl / BCLFragmentMutateMover.hhchemical / ResidueType.fwd.hh
bcl / BCLFragmentMutateMover.hhchemical / ResidueTypeSet.fwd.hh
bcl / BCLReferenceSDFilesManager.ccscoring / ScoreFunction.hh
bcl / BCLReferenceSDFilesManager.ccscoring / ScoreFunctionFactory.hh
bcl / BCLReferenceSDFilesManager.cctypes.hh
bcl / BCLSampleConfsManager.ccscoring / ScoreFunction.hh
bcl / BCLSampleConfsManager.ccscoring / ScoreFunctionFactory.hh
bcl / BCLSampleConfsManager.cctypes.hh
ChemicalReaction.hhchemical / rdkit / RDKit.fwd.hh
ChemicalReaction.hhtypes.hh
ConformationSelectionToRDMol.ccid / AtomID.hh
ConformationSelectionToRDMol.ccchemical / Bond.hh
ConformationSelectionToRDMol.ccconformation / Conformation.hh
ConformationSelectionToRDMol.ccchemical / Element.hh
ConformationSelectionToRDMol.ccconformation / Residue.hh
ConformationSelectionToRDMol.ccchemical / ResidueConnection.hh
ConformationSelectionToRDMol.ccchemical / rdkit / RestypeToRDMol.hh
ConformationSelectionToRDMol.ccchemical / rdkit / util.hh
ConformationSelectionToRDMol.hhchemical / AtomRefMapping.hh
ConformationSelectionToRDMol.hhconformation / Conformation.fwd.hh
ConformationSelectionToRDMol.hhchemical / MutableResidueType.fwd.hh
DrugDesignMover.ccconformation / Atom.hh
DrugDesignMover.ccchemical / AtomRefMapping.hh
DrugDesignMover.ccchemical / icoor_support.hh
DrugDesignMover.ccchemical / sdf / mol_writer.hh
DrugDesignMover.ccpose / PDBInfo.hh
DrugDesignMover.ccpose / Pose.hh
DrugDesignMover.ccchemical / PoseResidueTypeSet.hh
DrugDesignMover.ccconformation / Residue.hh
DrugDesignMover.ccconformation / ResidueFactory.hh
DrugDesignMover.ccchemical / rdkit / RestypeToRDMol.hh
DrugDesignMover.ccpose / util.hh
DrugDesignMover.hhchemical / AtomRefMapping.hh
DrugDesignMover.hhchemical / MutableResidueType.fwd.hh
DrugDesignMover.hhpose / Pose.fwd.hh
DrugDesignMover.hhchemical / PoseResidueTypeSet.fwd.hh
DrugDesignMover.hhconformation / Residue.fwd.hh
DrugDesignMover.hhchemical / ResidueType.fwd.hh
DrugPolishMover.ccconformation / Atom.hh
DrugPolishMover.ccchemical / AtomRefMapping.hh
DrugPolishMover.ccscoring / constraints / ConstraintSet.hh
DrugPolishMover.ccscoring / constraints / CoordinateConstraint.hh
DrugPolishMover.ccpack / min_pack.hh
DrugPolishMover.ccchemical / sdf / mol_writer.hh
DrugPolishMover.ccpack / task / PackerTask_.hh
DrugPolishMover.ccpose / PDBInfo.hh
DrugPolishMover.ccpose / Pose.hh
DrugPolishMover.ccconformation / Residue.hh
DrugPolishMover.ccconformation / ResidueFactory.hh
DrugPolishMover.ccchemical / ResidueTypeSet.hh
DrugPolishMover.ccpack / rtmin.hh
DrugPolishMover.ccscoring / ScoreFunction.hh
DrugPolishMover.ccpose / util.hh
DrugPolishMover.hhchemical / AtomRefMapping.hh
DrugPolishMover.hhpose / Pose.fwd.hh
DrugPolishMover.hhconformation / Residue.fwd.hh
DrugPolishMover.hhchemical / ResidueType.fwd.hh
DrugPolishMover.hhchemical / ResidueTypeSet.fwd.hh
HeteroHeteroBondFilter.ccpose / Pose.hh
HeteroHeteroBondFilter.ccconformation / Residue.hh
HeteroHeteroBondFilter.ccchemical / ResidueGraphTypes.hh
HeteroHeteroBondFilter.ccchemical / ResidueType.hh
HeteroHeteroBondFilter.ccpose / selection.hh
HeteroHeteroBondFilter.ccpose / util.hh
HeteroHeteroBondFilter.hhpose / Pose.fwd.hh
HeteroHeteroBondFilter.hhtypes.hh
LigandLocationFilter.ccpose / chains_util.hh
LigandLocationFilter.ccpose / Pose.hh
LigandLocationFilter.ccpose / selection.hh
LigandLocationFilter.cctypes.hh
LigandLocationFilter.ccpose / util.hh
LigandLocationFilter.hhpose / Pose.fwd.hh
LigandLocationFilter.hhtypes.hh
NChiFilter.ccpose / Pose.hh
NChiFilter.ccconformation / Residue.hh
NChiFilter.ccchemical / ResidueType.hh
NChiFilter.ccpose / selection.hh
NChiFilter.ccpose / util.hh
NChiFilter.hhpose / Pose.fwd.hh
NChiFilter.hhtypes.hh
RandomFragmentLigand.ccchemical / Atom.hh
RandomFragmentLigand.ccchemical / atomtype_support.hh
RandomFragmentLigand.ccchemical / Bond.hh
RandomFragmentLigand.ccchemical / bond_support.hh
RandomFragmentLigand.ccchemical / ChemicalManager.hh
RandomFragmentLigand.ccchemical / Element.hh
RandomFragmentLigand.ccchemical / Elements.hh
RandomFragmentLigand.ccchemical / ElementSet.hh
RandomFragmentLigand.ccchemical / gasteiger / GasteigerAtomTypeData.hh
RandomFragmentLigand.ccchemical / gasteiger / GasteigerAtomTyper.hh
RandomFragmentLigand.ccchemical / gasteiger / GasteigerAtomTypeSet.hh
RandomFragmentLigand.ccchemical / MutableResidueType.hh
RandomFragmentLigand.ccchemical / residue_support.hh
RandomFragmentLigand.ccchemical / ResidueGraphTypes.hh
RandomFragmentLigand.ccchemical / modifications / ValenceHandler.hh
RandomFragmentLigand.hhchemical / AtomRefMapping.hh
RandomFragmentLigand.hhchemical / MutableResidueType.fwd.hh
RDKitMetric.ccpose / Pose.hh
RDKitMetric.ccsimple_metrics / RealMetric.hh
RDKitMetric.ccconformation / Residue.hh
RDKitMetric.ccselect / residue_selector / ResidueSelector.hh
RDKitMetric.ccchemical / rdkit / RestypeToRDMol.hh
RDKitMetric.ccchemical / rdkit / util.hh
RDKitMetric.ccselect / residue_selector / util.hh
RDKitMetric.ccselect / util.hh
RDKitMetric.ccsimple_metrics / util.hh
RDKitMetric.hhsimple_metrics / RealMetric.hh
RDKitMetric.hhselect / residue_selector / ResidueSelector.fwd.hh
RDKitMetric.hhtypes.hh
RDKitMetricCreator.hhsimple_metrics / SimpleMetric.fwd.hh
RDKitMetricCreator.hhsimple_metrics / SimpleMetricCreator.hh
RDKitMetricFilter.ccpose / Pose.hh
RDKitMetricFilter.ccconformation / Residue.hh
RDKitMetricFilter.ccchemical / ResidueType.hh
RDKitMetricFilter.ccchemical / rdkit / RestypeToRDMol.hh
RDKitMetricFilter.ccpose / selection.hh
RDKitMetricFilter.ccpose / util.hh
RDKitMetricFilter.ccchemical / rdkit / util.hh
RDKitMetricFilter.hhpose / Pose.fwd.hh
RDKitMetricFilter.hhtypes.hh
RDKitMetricsMover.ccpose / chains_util.hh
RDKitMetricsMover.ccpose / extra_pose_info_util.hh
RDKitMetricsMover.ccpose / PDBInfo.hh
RDKitMetricsMover.ccpose / Pose.hh
RDKitMetricsMover.ccchemical / rdkit / RestypeToRDMol.hh
RDKitMetricsMover.ccchemical / rdkit / util.hh
RDKitMetricsMover.hhpose / Pose.fwd.hh
ReactionBasedAnalogSampler.ccchemical / gasteiger / GasteigerAtomTypeSet.hh
ReactionBasedAnalogSampler.ccchemical / Orbital.hh
ReactionBasedAnalogSampler.ccchemical / rdkit / RDMolToRestype.hh
ReactionBasedAnalogSampler.ccchemical / ResidueConnection.hh
ReactionBasedAnalogSampler.ccchemical / ResidueType.hh
ReactionBasedAnalogSampler.ccchemical / rdkit / RestypeToRDMol.hh
ReactionBasedAnalogSampler.ccchemical / rdkit / util.hh
ReactionBasedAnalogSampler.hhchemical / AtomRefMapping.hh
ReactionBasedAnalogSampler.hhchemical / rdkit / RDKit.fwd.hh
ReactionBasedAnalogSampler.hhchemical / ResidueType.fwd.hh
ReactionChemistry.ccchemical / MutableResidueType.hh
ReactionChemistry.ccchemical / rdkit / RDMolToRestype.hh
ReactionChemistry.ccchemical / rdkit / RestypeToRDMol.hh
ReactionChemistry.ccchemical / rdkit / util.hh
ReactionChemistry.hhchemical / AtomRefMapping.hh
ReactionChemistry.hhchemical / MutableResidueType.fwd.hh
ReactionChemistry.hhchemical / rdkit / RDKit.fwd.hh
ReactionFragment.ccchemical / MutableResidueType.hh
ReactionFragment.ccchemical / rdkit / RDMolToRestype.hh
ReactionFragment.ccchemical / rdkit / RestypeToRDMol.hh
ReactionFragment.ccchemical / rdkit / util.hh
ReactionFragment.hhchemical / AtomRefMapping.hh
ReactionFragment.hhchemical / MutableResidueType.fwd.hh
ReactionFragment.hhchemical / rdkit / RDKit.fwd.hh
ReactionGrow.ccchemical / MutableResidueType.hh
ReactionGrow.ccchemical / rdkit / RDMolToRestype.hh
ReactionGrow.ccchemical / rdkit / RestypeToRDMol.hh
ReactionGrow.ccchemical / rdkit / util.hh
ReactionGrow.hhchemical / AtomRefMapping.hh
ReactionGrow.hhchemical / MutableResidueType.fwd.hh
ReactionGrow.hhchemical / rdkit / RDKit.fwd.hh
ReactionMultiTransform.ccchemical / MutableResidueType.hh
ReactionMultiTransform.ccchemical / rdkit / RDMolToRestype.hh
ReactionMultiTransform.ccchemical / rdkit / RestypeToRDMol.hh
ReactionMultiTransform.ccchemical / rdkit / util.hh
ReactionMultiTransform.hhchemical / AtomRefMapping.hh
ReactionMultiTransform.hhchemical / MutableResidueType.fwd.hh
ReactionMultiTransform.hhchemical / rdkit / RDKit.fwd.hh
SAScoreFilter.ccpose / Pose.hh
SAScoreFilter.ccconformation / Residue.hh
SAScoreFilter.ccchemical / rdkit / RestypeToRDMol.hh
SAScoreFilter.ccpose / selection.hh
SAScoreFilter.cctypes.hh
SAScoreFilter.ccchemical / rdkit / util.hh
SAScoreFilter.hhpose / Pose.fwd.hh
SAScoreFilter.hhtypes.hh
SubstituentReplace.ccchemical / MutableResidueType.hh
SubstituentReplace.ccchemical / rdkit / RDKit.fwd.hh
SubstituentReplace.ccchemical / rdkit / RDMolToRestype.hh
SubstituentReplace.ccchemical / rdkit / RestypeToRDMol.hh
SubstituentReplace.ccchemical / rdkit / util.hh
SubstituentReplace.hhchemical / AtomRefMapping.hh
SubstituentReplace.hhchemical / MutableResidueType.fwd.hh
SubstituentReplace.hhchemical / rdkit / RDKit.fwd.hh
substitution_support.ccchemical / rdkit / RDKit.fwd.hh
substitution_support.ccchemical / rdkit / util.hh
substitution_support.hhchemical / AtomRefMapping.hh
substitution_support.hhchemical / rdkit / RDKit.fwd.hh
substitution_support.hhchemical / rdkit / util.hh
SubstructureReplace.ccchemical / MutableResidueType.hh
SubstructureReplace.ccchemical / rdkit / RDKit.fwd.hh
SubstructureReplace.ccchemical / rdkit / RDMolToRestype.hh
SubstructureReplace.ccchemical / rdkit / RestypeToRDMol.hh
SubstructureReplace.ccchemical / rdkit / util.hh
SubstructureReplace.hhchemical / AtomRefMapping.hh
SubstructureReplace.hhchemical / MutableResidueType.fwd.hh
SubstructureReplace.hhchemical / rdkit / RDKit.fwd.hh
util.ccchemical / AtomRefMapping.hh
util.ccscoring / constraints / ConstraintSet.hh
util.ccscoring / constraints / CoordinateConstraint.hh
util.ccscoring / Energies.hh
util.ccscoring / EnergyGraph.hh
util.cckinematics / FoldTree.hh
util.ccscoring / func / HarmonicFunc.hh
util.ccpack / task / PackerTask.hh
util.ccpose / Pose.hh
util.ccconformation / Residue.hh
util.ccpack / task / ResidueLevelTask.hh
util.ccchemical / ResidueType.hh
util.ccscoring / rms_util.hh
util.ccscoring / ScoreFunction.hh
util.ccpack / rotamers / SingleResidueRotamerLibrary.hh
util.ccpack / rotamers / SingleResidueRotamerLibraryFactory.hh
util.ccpack / task / TaskFactory.hh
util.hhchemical / AtomRefMapping.hh
util.hhpose / Pose.fwd.hh
util.hhconformation / Residue.fwd.hh
util.hhchemical / ResidueType.fwd.hh
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