Rosetta

motifs → core Relation

File in src/protocols/motifsIncludes file in src/core
BuildPosition.ccconformation / Residue.hh
BuildPosition.hhconformation / Residue.fwd.hh
BuildPosition.hhpack / rotamer_set / RotamerSet.fwd.hh
BuildPosition.hhtypes.hh
IdentifyLigandMotifs.ccchemical / AA.hh
IdentifyLigandMotifs.ccid / AtomID_Map.hh
IdentifyLigandMotifs.ccoptimization / AtomTreeMinimizer.hh
IdentifyLigandMotifs.ccchemical / AtomType.hh
IdentifyLigandMotifs.ccchemical / AtomTypeSet.hh
IdentifyLigandMotifs.ccchemical / ChemicalManager.hh
IdentifyLigandMotifs.ccconformation / Conformation.hh
IdentifyLigandMotifs.ccscoring / etable / count_pair / CountPairFunction.hh
IdentifyLigandMotifs.ccscoring / Energies.hh
IdentifyLigandMotifs.ccscoring / methods / EnergyMethodOptions.hh
IdentifyLigandMotifs.ccscoring / etable / Etable.hh
IdentifyLigandMotifs.ccscoring / etable / EtableEnergy.hh
IdentifyLigandMotifs.ccpose / extra_pose_info_util.hh
IdentifyLigandMotifs.cckinematics / FoldTree.hh
IdentifyLigandMotifs.ccscoring / hbonds / HBondEnergy.hh
IdentifyLigandMotifs.ccscoring / hbonds / HBondOptions.hh
IdentifyLigandMotifs.ccscoring / hbonds / hbonds.hh
IdentifyLigandMotifs.ccscoring / hbonds / HBondSet.fwd.hh
IdentifyLigandMotifs.ccscoring / hbonds / HBondSet.hh
IdentifyLigandMotifs.ccimport_pose / import_pose.hh
IdentifyLigandMotifs.ccscoring / methods / LongRangeTwoBodyEnergy.hh
IdentifyLigandMotifs.ccscoring / LREnergyContainer.hh
IdentifyLigandMotifs.ccimport_pose / pose_stream / MetaPoseInputStream.hh
IdentifyLigandMotifs.ccoptimization / Minimizer.hh
IdentifyLigandMotifs.ccoptimization / MinimizerOptions.hh
IdentifyLigandMotifs.ccchemical / MMAtomTypeSet.hh
IdentifyLigandMotifs.ccscoring / mm / MMTorsionLibrary.fwd.hh
IdentifyLigandMotifs.ccscoring / mm / MMTorsionLibrary.hh
IdentifyLigandMotifs.cckinematics / MoveMap.hh
IdentifyLigandMotifs.ccoptimization / Multifunc.hh
IdentifyLigandMotifs.ccpack / pack_rotamers.hh
IdentifyLigandMotifs.ccpack / packer_neighbors.hh
IdentifyLigandMotifs.ccpack / task / PackerTask.hh
IdentifyLigandMotifs.ccio / pdb / pdb_writer.hh
IdentifyLigandMotifs.ccpose / PDBInfo.hh
IdentifyLigandMotifs.ccpose / Pose.hh
IdentifyLigandMotifs.ccscoring / Ramachandran.hh
IdentifyLigandMotifs.ccconformation / Residue.hh
IdentifyLigandMotifs.ccchemical / residue_io.hh
IdentifyLigandMotifs.ccconformation / ResidueFactory.hh
IdentifyLigandMotifs.ccchemical / ResidueTypeSelector.hh
IdentifyLigandMotifs.ccchemical / ResidueTypeSet.hh
IdentifyLigandMotifs.ccscoring / rms_util.hh
IdentifyLigandMotifs.ccpack / rotamer_trials.hh
IdentifyLigandMotifs.ccpack / dunbrack / RotamerLibrary.hh
IdentifyLigandMotifs.ccpack / rotamer_set / RotamerSet.hh
IdentifyLigandMotifs.ccpack / rotamer_set / RotamerSetFactory.hh
IdentifyLigandMotifs.ccscoring / ScoreFunction.hh
IdentifyLigandMotifs.ccscoring / ScoreFunctionFactory.hh
IdentifyLigandMotifs.ccscoring / ScoreType.hh
IdentifyLigandMotifs.ccscoring / ScoringManager.hh
IdentifyLigandMotifs.ccscoring / methods / ShortRangeTwoBodyEnergy.fwd.hh
IdentifyLigandMotifs.ccscoring / methods / ShortRangeTwoBodyEnergy.hh
IdentifyLigandMotifs.ccpack / task / TaskFactory.hh
IdentifyLigandMotifs.ccscoring / TenANeighborGraph.hh
IdentifyLigandMotifs.cctypes.hh
IdentifyLigandMotifs.ccoptimization / types.hh
IdentifyLigandMotifs.ccimport_pose / pose_stream / util.hh
IdentifyLigandMotifs.ccchemical / util.hh
IdentifyLigandMotifs.ccchemical / VariantType.hh
IdentifyLigandMotifs.hhpose / Pose.fwd.hh
IdentifyLigandMotifs.hhconformation / Residue.fwd.hh
IdentifyLigandMotifs.hhscoring / ScoreFunction.fwd.hh
IdentifyLigandMotifs.hhtypes.hh
IRCollection.ccscoring / constraints / ConstraintSet.hh
IRCollection.ccscoring / Energies.hh
IRCollection.ccscoring / methods / EnergyMethodOptions.hh
IRCollection.ccscoring / hbonds / HBondOptions.hh
IRCollection.ccpose / PDBInfo.hh
IRCollection.ccpose / Pose.hh
IRCollection.ccconformation / Residue.hh
IRCollection.ccpack / rotamer_set / RotamerSet.hh
IRCollection.ccscoring / ScoreFunction.hh
IRCollection.ccscoring / ScoreFunctionFactory.hh
IRCollection.ccscoring / ScoreType.hh
IRCollection.cctypes.hh
IRCollection.hhpose / Pose.fwd.hh
IRCollection.hhconformation / Residue.fwd.hh
IRCollection.hhpack / rotamer_set / RotamerSet.fwd.hh
IRCollection.hhtypes.hh
LigandDiscoverySearch.ccchemical / AA.hh
LigandDiscoverySearch.ccimport_pose / atom_tree_diffs / atom_tree_diff.hh
LigandDiscoverySearch.ccid / AtomID.hh
LigandDiscoverySearch.ccchemical / AtomTypeSet.hh
LigandDiscoverySearch.ccchemical / ChemicalManager.hh
LigandDiscoverySearch.ccconformation / Conformation.hh
LigandDiscoverySearch.ccscoring / constraints / ConstraintSet.hh
LigandDiscoverySearch.ccscoring / constraints / CoordinateConstraint.hh
LigandDiscoverySearch.ccscoring / Energies.hh
LigandDiscoverySearch.ccscoring / EnergyMap.hh
LigandDiscoverySearch.ccscoring / methods / EnergyMethodOptions.hh
LigandDiscoverySearch.ccscoring / etable / Etable.hh
LigandDiscoverySearch.ccpose / extra_pose_info_util.hh
LigandDiscoverySearch.ccchemical / GlobalResidueTypeSet.hh
LigandDiscoverySearch.ccscoring / func / HarmonicFunc.hh
LigandDiscoverySearch.ccscoring / hbonds / hbonds.hh
LigandDiscoverySearch.ccscoring / hbonds / HBondSet.hh
LigandDiscoverySearch.ccimport_pose / import_pose.hh
LigandDiscoverySearch.ccoptimization / MinimizerOptions.hh
LigandDiscoverySearch.cckinematics / MoveMap.hh
LigandDiscoverySearch.ccchemical / MutableResidueType.hh
LigandDiscoverySearch.ccio / pdb / pdb_writer.hh
LigandDiscoverySearch.ccpose / PDBInfo.hh
LigandDiscoverySearch.ccpose / Pose.hh
LigandDiscoverySearch.ccchemical / PoseResidueTypeSet.hh
LigandDiscoverySearch.ccconformation / Residue.hh
LigandDiscoverySearch.ccchemical / residue_io.hh
LigandDiscoverySearch.ccconformation / ResidueFactory.hh
LigandDiscoverySearch.ccchemical / ResidueType.hh
LigandDiscoverySearch.ccchemical / ResidueTypeFinder.hh
LigandDiscoverySearch.ccchemical / ResidueTypeSet.hh
LigandDiscoverySearch.ccpack / rotamer_set / RotamerSet.hh
LigandDiscoverySearch.ccpack / rotamer_set / RotamerSetFactory.hh
LigandDiscoverySearch.ccscoring / ScoreFunction.hh
LigandDiscoverySearch.ccscoring / ScoreFunctionFactory.hh
LigandDiscoverySearch.ccscoring / dna / setup.hh
LigandDiscoverySearch.cctypes.hh
LigandDiscoverySearch.ccpose / xyzStripeHashPose.hh
LigandDiscoverySearch.hhid / AtomID.fwd.hh
LigandDiscoverySearch.hhchemical / AtomTypeSet.fwd.hh
LigandDiscoverySearch.hhchemical / ChemicalManager.fwd.hh
LigandDiscoverySearch.hhchemical / ChemicalManager.hh
LigandDiscoverySearch.hhconformation / Conformation.fwd.hh
LigandDiscoverySearch.hhscoring / constraints / ConstraintSet.fwd.hh
LigandDiscoverySearch.hhscoring / Energies.fwd.hh
LigandDiscoverySearch.hhscoring / EnergyMap.fwd.hh
LigandDiscoverySearch.hhscoring / methods / EnergyMethodOptions.fwd.hh
LigandDiscoverySearch.hhchemical / GlobalResidueTypeSet.fwd.hh
LigandDiscoverySearch.hhscoring / func / HarmonicFunc.fwd.hh
LigandDiscoverySearch.hhscoring / hbonds / HBondSet.fwd.hh
LigandDiscoverySearch.hhoptimization / MinimizerOptions.fwd.hh
LigandDiscoverySearch.hhkinematics / MoveMap.fwd.hh
LigandDiscoverySearch.hhchemical / MutableResidueType.fwd.hh
LigandDiscoverySearch.hhpose / PDBInfo.fwd.hh
LigandDiscoverySearch.hhpose / Pose.fwd.hh
LigandDiscoverySearch.hhpose / Pose.hh
LigandDiscoverySearch.hhchemical / PoseResidueTypeSet.fwd.hh
LigandDiscoverySearch.hhconformation / Residue.fwd.hh
LigandDiscoverySearch.hhchemical / ResidueType.fwd.hh
LigandDiscoverySearch.hhchemical / ResidueTypeFinder.fwd.hh
LigandDiscoverySearch.hhchemical / ResidueTypeSet.fwd.hh
LigandDiscoverySearch.hhpack / rotamer_set / RotamerSet.fwd.hh
LigandDiscoverySearch.hhpack / rotamer_set / RotamerSetFactory.fwd.hh
LigandDiscoverySearch.hhscoring / ScoreFunction.fwd.hh
LigandDiscoverySearch.hhscoring / ScoreFunctionFactory.fwd.hh
LigandDiscoverySearch.hhtypes.hh
LigandMotifSearch.ccchemical / AtomType.hh
LigandMotifSearch.ccchemical / AtomTypeSet.hh
LigandMotifSearch.ccchemical / ChemicalManager.hh
LigandMotifSearch.ccscoring / constraints / ConstraintSet.hh
LigandMotifSearch.ccscoring / Energies.hh
LigandMotifSearch.ccscoring / methods / EnergyMethodOptions.hh
LigandMotifSearch.cckinematics / MoveMap.hh
LigandMotifSearch.ccpack / task / PackerTask.hh
LigandMotifSearch.ccio / pdb / pdb_writer.hh
LigandMotifSearch.ccpose / PDBInfo.hh
LigandMotifSearch.ccpose / Pose.hh
LigandMotifSearch.ccconformation / Residue.hh
LigandMotifSearch.ccconformation / ResidueFactory.hh
LigandMotifSearch.ccpack / task / ResidueLevelTask.hh
LigandMotifSearch.ccchemical / ResidueType.hh
LigandMotifSearch.ccchemical / ResidueTypeSet.hh
LigandMotifSearch.ccpack / rotamer_set / RotamerSet.hh
LigandMotifSearch.ccpack / rotamer_set / RotamerSetFactory.hh
LigandMotifSearch.ccscoring / ScoreFunction.hh
LigandMotifSearch.ccscoring / ScoreFunctionFactory.hh
LigandMotifSearch.ccscoring / ScoreType.hh
LigandMotifSearch.ccpose / variant_util.hh
LigandMotifSearch.ccchemical / VariantType.hh
LigandMotifSearch.hhpack / task / PackerTask.fwd.hh
LigandMotifSearch.hhpose / Pose.fwd.hh
LigandMotifSearch.hhconformation / Residue.fwd.hh
LigandMotifSearch.hhpack / rotamer_set / RotamerSet.fwd.hh
LigandMotifSearch.hhtypes.hh
Motif.ccconformation / Atom.hh
Motif.ccchemical / AtomType.hh
Motif.ccchemical / AtomTypeSet.hh
Motif.ccchemical / ChemicalManager.hh
Motif.cckinematics / Jump.hh
Motif.ccpack / packer_neighbors.hh
Motif.ccpack / task / PackerTask.hh
Motif.ccpose / PDBInfo.hh
Motif.ccpose / Pose.hh
Motif.ccconformation / Residue.hh
Motif.ccpack / task / ResidueLevelTask.hh
Motif.ccchemical / ResidueType.hh
Motif.ccchemical / ResidueTypeSet.hh
Motif.ccpack / rotamer_set / RotamerSet.hh
Motif.ccpack / rotamer_set / RotamerSetFactory.hh
Motif.ccscoring / ScoreFunction.hh
Motif.ccscoring / ScoreType.hh
Motif.ccpack / task / TaskFactory.hh
Motif.hhconformation / Atom.fwd.hh
Motif.hhkinematics / Jump.hh
Motif.hhpose / Pose.fwd.hh
Motif.hhconformation / Residue.fwd.hh
Motif.hhpack / rotamer_set / RotamerSet.fwd.hh
Motif.hhtypes.hh
motif_utils.ccid / AtomID.hh
motif_utils.ccscoring / dna / base_geometry.hh
motif_utils.ccscoring / dna / BasePartner.hh
motif_utils.ccchemical / ChemicalManager.hh
motif_utils.ccscoring / constraints / ConstraintSet.hh
motif_utils.ccscoring / constraints / CoordinateConstraint.hh
motif_utils.ccscoring / func / HarmonicFunc.hh
motif_utils.ccimport_pose / import_pose.hh
motif_utils.cckinematics / Jump.hh
motif_utils.ccpack / pack_rotamers.hh
motif_utils.ccpack / packer_neighbors.hh
motif_utils.ccpack / task / PackerTask.hh
motif_utils.ccpose / PDBInfo.hh
motif_utils.ccpose / PDBPoseMap.hh
motif_utils.ccpose / Pose.hh
motif_utils.ccconformation / Residue.functions.hh
motif_utils.ccconformation / Residue.hh
motif_utils.ccconformation / ResidueFactory.hh
motif_utils.ccpack / task / ResidueLevelTask.hh
motif_utils.ccchemical / ResidueType.hh
motif_utils.ccchemical / ResidueTypeSet.hh
motif_utils.ccpack / rotamer_set / RotamerSet.hh
motif_utils.ccpack / rotamer_set / RotamerSetFactory.hh
motif_utils.cckinematics / RT.hh
motif_utils.ccscoring / ScoreFunction.hh
motif_utils.ccscoring / ScoreFunctionFactory.hh
motif_utils.ccscoring / dna / setup.hh
motif_utils.ccpack / task / TaskFactory.hh
motif_utils.cctypes.hh
motif_utils.ccpose / util.hh
motif_utils.hhchemical / AA.hh
motif_utils.hhscoring / constraints / ConstraintSet.fwd.hh
motif_utils.hhpose / Pose.fwd.hh
motif_utils.hhconformation / Residue.fwd.hh
motif_utils.hhpack / rotamer_set / RotamerSet.fwd.hh
motif_utils.hhtypes.hh
MotifDnaPacker.ccscoring / dna / BasePartner.hh
MotifDnaPacker.ccpack / task / operation / OperateOnCertainResidues.hh
MotifDnaPacker.ccpack / task / PackerTask.hh
MotifDnaPacker.ccpose / PDBInfo.hh
MotifDnaPacker.ccpose / Pose.hh
MotifDnaPacker.ccconformation / Residue.hh
MotifDnaPacker.ccpack / task / ResidueLevelTask.hh
MotifDnaPacker.ccchemical / ResidueType.hh
MotifDnaPacker.ccpack / task / operation / ResLvlTaskOperations.hh
MotifDnaPacker.ccscoring / ScoreFunction.hh
MotifDnaPacker.ccpack / task / TaskFactory.hh
MotifDnaPacker.ccpack / task / operation / TaskOperations.hh
MotifDnaPacker.cctypes.hh
MotifDnaPacker.ccpose / variant_util.hh
MotifDnaPacker.ccchemical / VariantType.hh
MotifDnaPacker.hhpose / Pose.fwd.hh
MotifDnaPacker.hhpack / rotamer_set / RotamerSet.fwd.hh
MotifDnaPacker.hhscoring / ScoreFunction.fwd.hh
MotifDnaPacker.hhpack / task / TaskFactory.fwd.hh
MotifHit.ccio / pdb / pdb_writer.hh
MotifHit.ccpose / Pose.hh
MotifHit.ccconformation / Residue.hh
MotifHit.hhconformation / Residue.fwd.hh
MotifHit.hhtypes.hh
MotifLibrary.hhtypes.hh
MotifSearch.ccchemical / ChemicalManager.hh
MotifSearch.ccscoring / constraints / ConstraintSet.hh
MotifSearch.ccscoring / Energies.hh
MotifSearch.ccscoring / methods / EnergyMethodOptions.hh
MotifSearch.cckinematics / MoveMap.hh
MotifSearch.ccio / pdb / pdb_writer.hh
MotifSearch.ccpose / PDBInfo.hh
MotifSearch.ccpose / Pose.hh
MotifSearch.ccconformation / Residue.hh
MotifSearch.ccconformation / ResidueFactory.hh
MotifSearch.ccchemical / ResidueType.hh
MotifSearch.ccchemical / ResidueTypeSet.hh
MotifSearch.ccscoring / rms_util.hh
MotifSearch.ccpack / rotamer_set / RotamerSet.hh
MotifSearch.ccpack / rotamer_set / RotamerSetFactory.hh
MotifSearch.ccscoring / ScoreFunction.hh
MotifSearch.ccscoring / ScoreFunctionFactory.hh
MotifSearch.ccscoring / ScoreType.hh
MotifSearch.hhpose / Pose.fwd.hh
MotifSearch.hhconformation / Residue.fwd.hh
MotifSearch.hhpack / rotamer_set / RotamerSet.fwd.hh
MotifSearch.hhtypes.hh
SingleMotif.cckinematics / Jump.hh
SingleMotif.ccconformation / Residue.fwd.hh
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