- a -

• aa : protocols::cluster::calibur
• AACompositionEnergyCreator_registrator : core::init
• AARepeatEnergyCreator_registrator : core::init
• abego2secstruct : protocols::denovo_design::components
• AbegoEnergyCreator_registrator : core::init
• ADD_BATCH : protocols::jd2::archive
• AddBehaviorRLTCreator_registrator : core::init
• AllResFilterCreator_registrator : core::init
• AmbiguousConstraintCreator_registrator : core::init
• AmbiguousNMRConstraintCreator_registrator : core::init
• AmbiguousNMRDistanceConstraintCreator_registrator : core::init
• anchor_num : protocols::protein_interface_design::movers
• AngleConstraintCreator_registrator : core::init
• angles : core::scoring::packstat::old
• AnyResFilterCreator_registrator : core::init
• AppendRotamerCreator_registrator : core::init
• AppendRotamerSetCreator_registrator : core::init
• ApproximateBuriedUnsatPenaltyCreator_registrator : core::init
• ArgCationPiEnergyCreator_registrator : core::init
• AromaticBackboneRestraintEnergyCreator_registrator : core::init
• AspartimidePenaltyEnergyCreator_registrator : core::init
• ASYMEZ_TABLE_BINS : core::energy_methods
• atom_vdw_ : core::scoring::epr_deer
• AtomPairConstraintCreator_registrator : core::init
• atoms_involved_in_phosphate_torsion : core::chemical::rna
• attachment_type_name : protocols::stepwise::monte_carlo::mover
• AUTHOR_AND_NOTE : update_ResidueType_enum_files