- d -

• d0 : protocols::hybridization
• D0_MIN : protocols::hybridization
• d0_out_ : protocols::hybridization
• d0_search : protocols::hybridization
• d0A : protocols::hybridization
• d0B : protocols::hybridization
• D2H_SA_EnergyCreator_registrator : core::init
• dcu0 : protocols::hybridization
• DDPscoreCreator_registrator : core::init
• debug : core::pack::interaction_graph
• debug_inaccurateG : core::optimization::symmetry
• DEEREnergyCreator_registrator : core::init
• DEFAULT_LABEL : protocols::cyclic_peptide
• DEFAULT_NCYCLES : protocols::hybridization
• default_stub : core::kinematics
• DEFAULT_TEMP : protocols::abinitio::abscript
• deflt_coords_ : core::scoring::epr_deer
• DEPC_MS_EnergyCreator_registrator : core::init
• DesignRestrictionsCreator_registrator : core::init
• DFIRE_EnergyCreator_registrator : core::init
• DihedralConstraintCreator_registrator : core::init
• DihedralPairConstraintCreator_registrator : core::init
• dim3d_ : core::scoring::epr_deer
• DIM6 : protocols::evaluation , protocols::toolbox
• DipolarCouplingEnergyCreator_registrator : core::init
• dir_jump : core::kinematics
• DirectReadoutEnergyCreator_registrator : core::init
• DisallowIfNonnativeCreator_registrator : core::init
• DisallowIfNonnativeRLTCreator_registrator : core::init
• DistanceChainbreakEnergyCreator_registrator : core::init
• DisulfideMatchingEnergyCreator_registrator : core::init
• DNA_BaseEnergyCreator_registrator : core::init
• DNA_DihedralEnergyCreator_registrator : core::init
• DNA_INT_WTS : core::scoring
• DNA_INT_WTS_GB : core::scoring
• DNAChiEnergyCreator_registrator : core::init
• DNATorsionEnergyCreator_registrator : core::init
• DOCK_LOW_PATCH : core::scoring
• DOCK_PATCH : core::scoring
• DOCKJUMP_TAG : protocols::rigid
• DUMMY_BOOL : core::scoring::hbonds
• DUMMY_DERIV : core::scoring::hbonds
• dummy_deriv_vector_ : core::energy_methods
• DUMMY_DERIVS : core::scoring::hbonds
• DUMMY_HBE : core::scoring::hbonds
• DUMMY_HBGEODIMTYPE : core::scoring::hbonds
• dummy_nodeop : core::pack::scmin
• DUMMY_VECTOR : core::scoring::carbon_hbonds
• DumpTrajectoryEnergy_registrator : core::init
• DUNBRACK_FILE_DEFAULT_SCTOR : core::pack::dunbrack
• DUNBRACK_MAX_BBTOR : core::pack::dunbrack
• DUNBRACK_MAX_SCTOR : core::pack::dunbrack
• DunbrackConstraintCreator_registrator : core::init
• DunbrackEnergyCreator_registrator : core::init
• DunbrackRotamerLibrarySpecificationCreator_registrator : core::init