-MR::mode cm
-in::file::extended_pose 1
-in::file::fasta inputs/1crb.fasta
-in::file::alignment inputs/2qo4.ali
-in::file::template_pdb inputs/2qo4.PHASER.1.pdb
-loops::frag_sizes 9 3 1
-loops::frag_files inputs/xx1crb_09_05.200_v1_3.gz inputs/xx1crb_03_05.200_v1_3.gz none
-loops::random_order
-loops::random_grow_loops_by 5
-loops::extended
-loops::remodel quick_ccd
-loops::relax no
-edensity:mapreso 12.0
-edensity:grid_spacing 6.0
-edensity:mapfile inputs/2qo4.PHASER.1_2mFo-DFc.ccp4
-edensity::sliding_window_wt 0.1
-edensity::sliding_window 5
-cm::aln_format grishin
-MR::max_gaplength_to_model 4
-nstruct 1
-ignore_unrecognized_res
-overwrite
