-s input/1l6x.min.pdb
-mute core.util.prof ## dont show timing info
-out:file:fullatom
-mute core.io.database
-jd2:ntrials 1
-parser:protocol example_script.xml
-parser:script_vars sasaconf=0 dock_sf=score12 inter_cutoff=10 ala_rep=5 sub_ala_rep=2
-overwrite
