patches/CtermProteinFull.txt
patches/NtermProteinFull.txt
patches/LowerDNA.txt
patches/UpperDNA.txt
patches/protein_cutpoint_upper.txt
patches/protein_cutpoint_lower.txt
patches/VirtualBB.txt
patches/VirtualDNAPhosphate.txt

## uncomment this Brian
patches/CtermConnect.txt
