Score a protein with the defaults:
./score.linuxgccrelease -database <PATH TO ROSETTA DATABASE> -s input/test_in.pdb

Score a slient file format protein with fullatom:
/score.linuxgccrelease -in:file:silent score3_in.silent_out -score:weights score3 -database <PATH TO ROSETTA DATABASE>
./score.linuxgccrelease -in:file:silent score3_in.silent_out -in:file:fullatom -database <PATH TO ROSETTA DATABASE>

