fragment_scoring_utilities.hh File Reference

functions and data types common for fragment scoring More...

#include <core/types.hh>
#include <utility/vector1.hh>
#include <algorithm>

Go to the source code of this file.

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::frag_picker
	protocols::frag_picker::scores

Constant Groups
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::frag_picker
	protocols::frag_picker::scores

Functions
void	protocols::frag_picker::scores::do_one_line (Size start_i, Size start_j, Matrix &small_scores, Size frag_len, Matrix &frag_scores)
void	protocols::frag_picker::scores::rolling_score (Matrix &small_scores, Size frag_len, Matrix &frag_scores)
void	protocols::frag_picker::scores::create_cache (utility::vector1< Size > &frag_sizes, Size query_len, Size longest_vall_chunk, utility::vector1< Matrix > &cache)
void	protocols::frag_picker::scores::allocate_matrix (Size i_size, Size j_size, Matrix &dst)

Detailed Description

functions and data types common for fragment scoring

Author

Dominik Gront

Definition in file fragment_scoring_utilities.hh.