protocols::motifs::BuildPosition Class Reference

#include <BuildPosition.hh>

Inheritance diagram for protocols::motifs::BuildPosition:

Collaboration diagram for protocols::motifs::BuildPosition:

Public Member Functions
	BuildPosition (Size const seqpos, utility::vector1< Size > const &target_positions)
	BuildPosition (Size const seqpos, utility::vector1< Size > const &target_positions, std::set< std::string > const &allowed_types)
virtual	~BuildPosition ()
	BuildPosition (BuildPosition const &src)
BuildPositionOP	clone () const
void	keep_rotamer (core::conformation::Residue const &res)
void	keep_motif (Motif const &motif)
void	keep_motifhit (MotifHit const &motifhit)
void	clear_data ()
void	clear_rots ()
Size const &	seqpos () const
utility::vector1< Size > const &	target_positions () const
std::set< std::string > const &	allowed_types () const
core::pack::rotamer_set::Rotamers const &	best_rotamers () const
MotifCOPs const &	best_motifs () const
MotifHitCOPs const &	best_motifhits () const

Private Attributes
Size	seqpos_
utility::vector1< Size >	target_positions_
std::set< std::string >	allowed_types_
core::pack::rotamer_set::Rotamers	best_rotamers_
MotifCOPs	best_motifs_
MotifHitCOPs	best_motifhits_

Detailed Description

Definition at line 45 of file BuildPosition.hh.

Constructor & Destructor Documentation

protocols::motifs::BuildPosition::BuildPosition	(	Size const	seqpos,
		utility::vector1< Size > const &	target_positions
	)

Definition at line 34 of file BuildPosition.cc.

Referenced by clone().

protocols::motifs::BuildPosition::BuildPosition	(	Size const	seqpos,
		utility::vector1< Size > const &	target_positions,
		std::set< std::string > const &	allowed_types
	)

Definition at line 46 of file BuildPosition.cc.

protocols::motifs::BuildPosition::~BuildPosition ( )

virtual

Definition at line 58 of file BuildPosition.cc.

protocols::motifs::BuildPosition::BuildPosition

(

BuildPosition const &

src)

Definition at line 61 of file BuildPosition.cc.

Member Function Documentation

std::set< std::string > const& protocols::motifs::BuildPosition::allowed_types ( ) const

inline

Definition at line 91 of file BuildPosition.hh.

References allowed_types_.

MotifHitCOPs const& protocols::motifs::BuildPosition::best_motifhits ( ) const

inline

Definition at line 94 of file BuildPosition.hh.

References best_motifhits_.

MotifCOPs const& protocols::motifs::BuildPosition::best_motifs ( ) const

inline

Definition at line 93 of file BuildPosition.hh.

References best_motifs_.

core::pack::rotamer_set::Rotamers const& protocols::motifs::BuildPosition::best_rotamers ( ) const

inline

Definition at line 92 of file BuildPosition.hh.

References best_rotamers_.

void protocols::motifs::BuildPosition::clear_data

(

)

Definition at line 102 of file BuildPosition.cc.

References best_motifs_, and best_rotamers_.

void protocols::motifs::BuildPosition::clear_rots

(

)

Definition at line 109 of file BuildPosition.cc.

References best_rotamers_.

BuildPositionOP protocols::motifs::BuildPosition::clone

(

)

const

Definition at line 72 of file BuildPosition.cc.

References BuildPosition().

void protocols::motifs::BuildPosition::keep_motif

(

Motif const &

motif)

Definition at line 86 of file BuildPosition.cc.

References best_motifs_, and protocols::motifs::Motif::clone().

Referenced by protocols::motifs::load_build_position_data().

void protocols::motifs::BuildPosition::keep_motifhit

(

MotifHit const &

motifhit)

Definition at line 94 of file BuildPosition.cc.

References best_motifhits_, and protocols::motifs::MotifHit::clone().

void protocols::motifs::BuildPosition::keep_rotamer

(

core::conformation::Residue const &

res)

Definition at line 78 of file BuildPosition.cc.

References best_rotamers_, and core::conformation::Residue::clone().

Referenced by protocols::motifs::load_build_position_data().

Size const& protocols::motifs::BuildPosition::seqpos ( ) const

inline

Definition at line 89 of file BuildPosition.hh.

References seqpos_.

Referenced by protocols::motifs::load_build_position_data().

utility::vector1< Size > const& protocols::motifs::BuildPosition::target_positions ( ) const

inline

Definition at line 90 of file BuildPosition.hh.

References target_positions_.

Member Data Documentation

std::set< std::string > protocols::motifs::BuildPosition::allowed_types_

private

Definition at line 103 of file BuildPosition.hh.

Referenced by allowed_types().

MotifHitCOPs protocols::motifs::BuildPosition::best_motifhits_

private

Definition at line 108 of file BuildPosition.hh.

Referenced by best_motifhits(), and keep_motifhit().

MotifCOPs protocols::motifs::BuildPosition::best_motifs_

private

Definition at line 107 of file BuildPosition.hh.

Referenced by best_motifs(), clear_data(), and keep_motif().

core::pack::rotamer_set::Rotamers protocols::motifs::BuildPosition::best_rotamers_

private

Definition at line 105 of file BuildPosition.hh.

Referenced by best_rotamers(), clear_data(), clear_rots(), and keep_rotamer().

Size protocols::motifs::BuildPosition::seqpos_

private

Definition at line 99 of file BuildPosition.hh.

Referenced by seqpos().

utility::vector1< Size > protocols::motifs::BuildPosition::target_positions_

private

Definition at line 101 of file BuildPosition.hh.

Referenced by target_positions().

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The documentation for this class was generated from the following files:

• src/protocols/motifs/BuildPosition.hh
• src/protocols/motifs/BuildPosition.cc