core::kinematics::TreeVizBuilder Struct Reference

Collaboration diagram for core::kinematics::TreeVizBuilder:

Public Member Functions
	TreeVizBuilder (core::kinematics::FoldTree const &_ft)
void	get_ft_node_bounds (Size res, Size &out_lb, Size &out_ub)
Size	get_ft_node_lower_bound (Size res)
Size	is_single (Size res)
Size	get_ft_node_subroot (Size res)
void	expand_node_labels_partial_by_contig (std::map< Size, std::string > &node_labels_partial)
utility::vector1< std::string >	get_res_nodenames (std::map< Size, std::string > node_labels_partial)
Size	get_jump_num_to_contig_of_resi (Size resi)

Public Attributes
utility::vector1< Size >	lb_
utility::vector1< Size >	ub_
FoldTree const &	ft

Detailed Description

Definition at line 547 of file util.cc.

Constructor & Destructor Documentation

core::kinematics::TreeVizBuilder::TreeVizBuilder ( core::kinematics::FoldTree const &  _ft)

inline

Definition at line 551 of file util.cc.

Member Function Documentation

void core::kinematics::TreeVizBuilder::expand_node_labels_partial_by_contig ( std::map< Size, std::string > &  node_labels_partial)

inline

Definition at line 589 of file util.cc.

Referenced by core::kinematics::visualize_fold_tree().

void core::kinematics::TreeVizBuilder::get_ft_node_bounds ( Size  res, Size &  out_lb, Size &  out_ub  )

inline

Definition at line 556 of file util.cc.

References core::pack::dunbrack::c.

Referenced by core::kinematics::visualize_fold_tree().

Size core::kinematics::TreeVizBuilder::get_ft_node_lower_bound ( Size  res)

inline

Definition at line 569 of file util.cc.

Size core::kinematics::TreeVizBuilder::get_ft_node_subroot ( Size  res)

inline

Definition at line 580 of file util.cc.

Size core::kinematics::TreeVizBuilder::get_jump_num_to_contig_of_resi ( Size  resi)

inline

Definition at line 632 of file util.cc.

Referenced by core::kinematics::visualize_fold_tree().

utility::vector1<std::string> core::kinematics::TreeVizBuilder::get_res_nodenames ( std::map< Size, std::string >  node_labels_partial)

inline

Definition at line 612 of file util.cc.

Referenced by core::kinematics::visualize_fold_tree().

Size core::kinematics::TreeVizBuilder::is_single ( Size  res)

inline

Definition at line 574 of file util.cc.

Referenced by core::kinematics::visualize_fold_tree().

Member Data Documentation

FoldTree const& core::kinematics::TreeVizBuilder::ft

Definition at line 549 of file util.cc.

utility::vector1<Size> core::kinematics::TreeVizBuilder::lb_

Definition at line 548 of file util.cc.

utility::vector1<Size> core::kinematics::TreeVizBuilder::ub_

Definition at line 548 of file util.cc.

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The documentation for this struct was generated from the following file:

• src/core/kinematics/util.cc