#include <ResiduesInInterfaceFilter.hh>

Inheritance diagram for protocols::simple_filters::ResiduesInInterfaceFilter:

Collaboration diagram for protocols::simple_filters::ResiduesInInterfaceFilter:

Public Member Functions
	ResiduesInInterfaceFilter ()

	ResiduesInInterfaceFilter (core::Size const residues_in_interface_threshold, core::Size const rb_jump)

bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...

filters::FilterOP	clone () const

filters::FilterOP	fresh_instance () const

	ResiduesInInterfaceFilter (ResiduesInInterfaceFilter const &init)

void	report (std::ostream &out, core::pose::Pose const &pose) const

core::Real	report_sm (core::pose::Pose const &pose) const
	used to report filter internals through a score or silent file More...

core::Size	compute (core::pose::Pose const &pose) const

virtual	~ResiduesInInterfaceFilter ()

void	parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

virtual	~Filter ()

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	score (core::io::serialization::PipeMap &pmap)

virtual core::Real	score (core::pose::Pose &pose)

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

virtual std::string	name () const

Private Attributes
core::Size	residues_in_interface_threshold_

core::Size	rb_jump_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Detailed Description

Definition at line 28 of file ResiduesInInterfaceFilter.hh.

Constructor & Destructor Documentation

protocols::simple_filters::ResiduesInInterfaceFilter::ResiduesInInterfaceFilter ( )

inline

Definition at line 31 of file ResiduesInInterfaceFilter.hh.

Referenced by clone(), and fresh_instance().

protocols::simple_filters::ResiduesInInterfaceFilter::ResiduesInInterfaceFilter	(	core::Size const	residues_in_interface_threshold,
		core::Size const	rb_jump
	)

inline

Definition at line 32 of file ResiduesInInterfaceFilter.hh.

References rb_jump_, and residues_in_interface_threshold_.

protocols::simple_filters::ResiduesInInterfaceFilter::ResiduesInInterfaceFilter ( ResiduesInInterfaceFilter const & init)

inline

Definition at line 43 of file ResiduesInInterfaceFilter.hh.

References rb_jump_, and residues_in_interface_threshold_.

protocols::simple_filters::ResiduesInInterfaceFilter::~ResiduesInInterfaceFilter ( )

virtual

Definition at line 82 of file ResiduesInInterfaceFilter.cc.

Member Function Documentation

bool protocols::simple_filters::ResiduesInInterfaceFilter::apply ( core::pose::Pose const & pose) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

Definition at line 116 of file ResiduesInInterfaceFilter.cc.

References compute(), and residues_in_interface_threshold_.

filters::FilterOP protocols::simple_filters::ResiduesInInterfaceFilter::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

Definition at line 37 of file ResiduesInInterfaceFilter.hh.

References ResiduesInInterfaceFilter().

core::Size protocols::simple_filters::ResiduesInInterfaceFilter::compute ( core::pose::Pose const & pose) const

Detailed: a utility for docking_filter

Definition at line 85 of file ResiduesInInterfaceFilter.cc.

References core::scoring::ScoreFunctionFactory::create_score_function(), core::pose::Pose::num_jump(), rb_jump_, core::scoring::SCORE12_PATCH, and core::scoring::STANDARD_WTS.

Referenced by apply(), report(), and report_sm().

filters::FilterOP protocols::simple_filters::ResiduesInInterfaceFilter::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

Definition at line 40 of file ResiduesInInterfaceFilter.hh.

References ResiduesInInterfaceFilter().

void protocols::simple_filters::ResiduesInInterfaceFilter::parse_my_tag	(	utility::tag::TagPtr const	tag,
		protocols::moves::DataMap &	,
		filters::Filters_map const &	,
		protocols::moves::Movers_map const &	,
		core::pose::Pose const &
	)