Low-resolution (centroid-mode) filter for docking. Checks (1) at least some contact is being made between docking partners, (2) clashes are limited so partners are not overlapping and (3) constraints, if present, are met. More...

#include <DockFilters.hh>

Inheritance diagram for protocols::docking::DockingLowResFilter:

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Collaboration diagram for protocols::docking::DockingLowResFilter:

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Public Member Functions
	DockingLowResFilter ()

	DockingLowResFilter (const DockingLowResFilter &init)

	~DockingLowResFilter ()

void	set_use_constraints (bool flag, core::Real cutoff=1.0)

bool	apply (core::pose::Pose const &pose) const
	add docking constraints More...

void	report (std::ostream &out, core::pose::Pose const &pose) const

protocols::filters::FilterOP	clone () const

protocols::filters::FilterOP	fresh_instance () const

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

virtual	~Filter ()

virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	parse_my_tag (utility::tag::TagPtr const, moves::DataMap &, Filters_map const &, moves::Movers_map const &, core::pose::Pose const &)

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	score (core::io::serialization::PipeMap &pmap)

virtual core::Real	score (core::pose::Pose &pose)

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

virtual std::string	name () const

Private Attributes
bool	use_constraints_

core::Real	constraint_cutoff_
	boolean to indicate if constraints are used More...

protocols::filters::FilterCollectionOP	filters_
	cutoff value for the constraint score More...

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Detailed Description

Low-resolution (centroid-mode) filter for docking. Checks (1) at least some contact is being made between docking partners, (2) clashes are limited so partners are not overlapping and (3) constraints, if present, are met.

Definition at line 44 of file DockFilters.hh.