core::pack::task::NC Class Reference

NC handles explicit allowance of noncanonical residue types. More...

#include <ResfileReader.hh>

Inheritance diagram for core::pack::task::NC:

Collaboration diagram for core::pack::task::NC:

Public Member Functions
virtual ResfileCommandOP	clone () const
virtual void	initialize_from_tokens (utility::vector1< std::string > const &tokens, Size &which_token, Size resid)
	NC allows a noncanonical residue; use one NC command per noncanonical. More...
virtual void	residue_action (PackerTask &, Size resid) const
	Modify the packer task with the command that was read in. More...
Public Member Functions inherited from core::pack::task::ResfileCommand
virtual	~ResfileCommand ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Static Public Member Functions
static std::string	name ()

Private Attributes
std::string	nc_to_include_

Detailed Description

NC handles explicit allowance of noncanonical residue types.

Definition at line 500 of file ResfileReader.hh.

Member Function Documentation

virtual ResfileCommandOP core::pack::task::NC::clone ( ) const

inlinevirtual

Implements core::pack::task::ResfileCommand.

Definition at line 503 of file ResfileReader.hh.

void core::pack::task::NC::initialize_from_tokens ( utility::vector1< std::string > const &  tokens, Size &  which_token, Size  resid  )

virtual

NC allows a noncanonical residue; use one NC command per noncanonical.

Implements core::pack::task::ResfileCommand.

Definition at line 1070 of file ResfileReader.cc.

References core::pack::task::get_token().

static std::string core::pack::task::NC::name ( )

inlinestatic

Definition at line 518 of file ResfileReader.hh.

Referenced by core::pack::task::create_command_map().

void core::pack::task::NC::residue_action ( PackerTask &  , Size  resid  ) const

virtual

Modify the packer task with the command that was read in.

Implements core::pack::task::ResfileCommand.

Definition at line 1083 of file ResfileReader.cc.

References core::pack::task::ResidueLevelTask::allow_noncanonical_aa(), core::pack::task::ResidueLevelTask::get_original_residue_set(), core::chemical::ResidueTypeSet::has_name(), core::pack::task::PackerTask::nonconst_residue_task(), core::pack::task::onError(), and core::pack::task::PackerTask::residue_task().

Member Data Documentation

std::string core::pack::task::NC::nc_to_include_

private

Definition at line 520 of file ResfileReader.hh.

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The documentation for this class was generated from the following files:

• src/core/pack/task/ResfileReader.hh
• src/core/pack/task/ResfileReader.cc