core::scoring::CenListInfo Class Reference

Keep track of the cenlist information. More...

#include <EnvPairPotential.hh>

Inheritance diagram for core::scoring::CenListInfo:

Collaboration diagram for core::scoring::CenListInfo:

Public Member Functions
	CenListInfo ()
	CenListInfo (CenListInfo const &src)
basic::datacache::CacheableDataOP	clone () const
Size	size () const
Real	fcen6 (Size const seqpos) const
Real &	fcen6 (Size const seqpos)
Real	fcen10 (Size const seqpos) const
Real &	fcen10 (Size const seqpos)
Real	fcen12 (Size const seqpos) const
Real &	fcen12 (Size const seqpos)
bool	calculated () const
bool &	calculated ()
void	initialize (pose::Pose const &pose)
void	set_fcen6 (Size const seqpos, Real value)
void	set_fcen10 (Size const seqpos, Real value)
void	set_fcen12 (Size const seqpos, Real value)

Private Attributes
utility::vector1< Real >	fcen6_
utility::vector1< Real >	fcen10_
utility::vector1< Real >	fcen12_
bool	calculated_

Detailed Description

Keep track of the cenlist information.

Definition at line 51 of file EnvPairPotential.hh.

Constructor & Destructor Documentation

core::scoring::CenListInfo::CenListInfo ( )

inline

Definition at line 55 of file EnvPairPotential.hh.

Referenced by clone().

core::scoring::CenListInfo::CenListInfo

(

CenListInfo const &

src)

Copy constructors must copy all data, not just some...

Definition at line 50 of file EnvPairPotential.cc.

References calculated_, fcen10_, fcen12_, and fcen6_.

Member Function Documentation

bool core::scoring::CenListInfo::calculated ( ) const

inline

Definition at line 107 of file EnvPairPotential.hh.

References calculated_.

Referenced by core::scoring::EnvPairPotential::compute_centroid_environment(), protocols::scoring::InterchainPotential::finalize(), core::scoring::EnvPairPotential::finalize(), core::scoring::MembranePotential::finalize(), and core::scoring::Membrane_FAPotential::finalize().

bool& core::scoring::CenListInfo::calculated ( )

inline

Definition at line 113 of file EnvPairPotential.hh.

References calculated_.

basic::datacache::CacheableDataOP core::scoring::CenListInfo::clone ( ) const

inline

Definition at line 60 of file EnvPairPotential.hh.

References CenListInfo().

Real core::scoring::CenListInfo::fcen10 ( Size const  seqpos) const

inline

Definition at line 83 of file EnvPairPotential.hh.

References fcen10_.

Referenced by core::scoring::EnvPairPotential::evaluate_env_and_cbeta_scores(), core::scoring::EnvPairPotential::fill_cenlist(), core::scoring::methods::MembraneLipo::finalize_total_energy(), and core::scoring::EnvPairPotential::truncate_cenlist_values().

Real& core::scoring::CenListInfo::fcen10 ( Size const  seqpos)

inline

Definition at line 89 of file EnvPairPotential.hh.

References fcen10_.

Real core::scoring::CenListInfo::fcen12 ( Size const  seqpos) const

inline

Definition at line 95 of file EnvPairPotential.hh.

References fcen12_.

Referenced by core::scoring::EnvPairPotential::evaluate_env_and_cbeta_scores(), core::scoring::EnvPairPotential::fill_cenlist(), and core::scoring::EnvPairPotential::truncate_cenlist_values().

Real& core::scoring::CenListInfo::fcen12 ( Size const  seqpos)

inline

Definition at line 101 of file EnvPairPotential.hh.

References fcen12_.

Real core::scoring::CenListInfo::fcen6 ( Size const  seqpos) const

inline

Definition at line 71 of file EnvPairPotential.hh.

References fcen6_.

Referenced by core::scoring::EnvPairPotential::evaluate_env_and_cbeta_scores(), core::scoring::EnvPairPotential::fill_cenlist(), and core::scoring::EnvPairPotential::truncate_cenlist_values().

Real& core::scoring::CenListInfo::fcen6 ( Size const  seqpos)

inline

Definition at line 77 of file EnvPairPotential.hh.

References fcen6_.

void core::scoring::CenListInfo::initialize

(

pose::Pose const &

pose)

Definition at line 60 of file EnvPairPotential.cc.

References fcen10_, fcen12_, fcen6_, and core::pose::Pose::total_residue().

Referenced by core::scoring::EnvPairPotential::compute_centroid_environment(), and core::scoring::MembranePotential::compute_membrane_embedding().

void core::scoring::CenListInfo::set_fcen10 ( Size const  seqpos, Real  value  )

inline

Definition at line 129 of file EnvPairPotential.hh.

References fcen10_.

void core::scoring::CenListInfo::set_fcen12 ( Size const  seqpos, Real  value  )

inline

Definition at line 135 of file EnvPairPotential.hh.

References fcen12_.

void core::scoring::CenListInfo::set_fcen6 ( Size const  seqpos, Real  value  )

inline

Definition at line 123 of file EnvPairPotential.hh.

References fcen6_.

Size core::scoring::CenListInfo::size ( ) const

inline

Definition at line 66 of file EnvPairPotential.hh.

References fcen6_.

Referenced by core::scoring::EnvPairPotential::truncate_cenlist_values().

Member Data Documentation

bool core::scoring::CenListInfo::calculated_

private

Definition at line 144 of file EnvPairPotential.hh.

Referenced by calculated(), and CenListInfo().

utility::vector1< Real > core::scoring::CenListInfo::fcen10_

private

Definition at line 142 of file EnvPairPotential.hh.

Referenced by CenListInfo(), fcen10(), initialize(), and set_fcen10().

utility::vector1< Real > core::scoring::CenListInfo::fcen12_

private

Definition at line 143 of file EnvPairPotential.hh.

Referenced by CenListInfo(), fcen12(), initialize(), and set_fcen12().

utility::vector1< Real > core::scoring::CenListInfo::fcen6_

private

Definition at line 141 of file EnvPairPotential.hh.

Referenced by CenListInfo(), fcen6(), initialize(), set_fcen6(), and size().

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The documentation for this class was generated from the following files:

• src/core/scoring/EnvPairPotential.hh
• src/core/scoring/EnvPairPotential.cc