ParserJobInputter.hh

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/// @file   protocols/jd2/ParserJobInputter.hh
/// @brief  header file for PatchdockJobInputter. Feeds poses based on a starting structure and a patchdock output file describing the rigid-body transformations to apply to the pose
/// @author Sarel Fleishman sarelf@u.washington.edu


#ifndef INCLUDED_protocols_protein_interface_design_ParserJobInputter_hh
#define INCLUDED_protocols_protein_interface_design_ParserJobInputter_hh

//unit headers
#include <protocols/jd2/PDBJobInputter.hh>
#include <protocols/protein_interface_design/ParserJobInputter.fwd.hh>
#include <protocols/jd2/Job.fwd.hh>

//project headers
#include <core/pose/Pose.fwd.hh>

#include <utility/vector1.hh>


//utility headers

namespace protocols {
namespace protein_interface_design {

class ParserJobInputter : public protocols::jd2::PDBJobInputter
{
public:

  ParserJobInputter();

  virtual ~ParserJobInputter();

  ///@brief this function is responsible for filling the pose reference with the pose indicated by the job.  The Job object (within its InnerJob) contains a PoseCOP.  This function needs to either fill the pose reference from the InnerJob or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference.  This implementation uses pose_from_pdb
  virtual void pose_from_job( core::pose::Pose & pose, protocols::jd2::JobOP job );

}; // ParserJobInputter

} // namespace protein_interface_design
} // namespace protocols

#endif //INCLUDED_protocols_protein_interface_design_ParserJobInputter_HH