core::scoring::FACTSPoseInfo Class Reference

#include <FACTSPotential.hh>

Inheritance diagram for core::scoring::FACTSPoseInfo:

Collaboration diagram for core::scoring::FACTSPoseInfo:

Public Types
typedef conformation::Residue	Residue
typedef conformation::ResidueOP	ResidueOP

Public Member Functions
	FACTSPoseInfo ()
	FACTSPoseInfo (FACTSPoseInfo const &src)
basic::datacache::CacheableDataOP	clone () const
Size	size () const
FACTSResidueInfo &	residue_info (Size const i)
FACTSResidueInfo const &	residue_info (Size const i) const
bool	being_packed (Size const seqpos) const
void	set_placeholder (Size const i, ResidueOP rsd, FACTSResidueInfoOP info)
FACTSResidueInfo const &	placeholder_info (Size const seqpos) const
Residue const &	placeholder_residue (Size const seqpos) const
void	initialize (pose::Pose const &pose)
void	set_repack_list (utility::vector1< bool > const &repacking_residues)

Public Attributes
utility::vector1 < FACTSResidueInfoOP >	residue_info_
utility::vector1< ResidueOP >	placeholder_residue_
utility::vector1 < FACTSResidueInfoOP >	placeholder_info_
utility::vector1< bool >	being_packed_

Detailed Description

Definition at line 205 of file FACTSPotential.hh.

Member Typedef Documentation

typedef conformation::Residue core::scoring::FACTSPoseInfo::Residue

Definition at line 208 of file FACTSPotential.hh.

typedef conformation::ResidueOP core::scoring::FACTSPoseInfo::ResidueOP

Definition at line 209 of file FACTSPotential.hh.

Constructor & Destructor Documentation

core::scoring::FACTSPoseInfo::FACTSPoseInfo ( )

inline

Definition at line 213 of file FACTSPotential.hh.

core::scoring::FACTSPoseInfo::FACTSPoseInfo

(

FACTSPoseInfo const &

src)

Definition at line 239 of file FACTSPotential.cc.

References being_packed_, placeholder_info_, placeholder_residue_, residue_info_, and size().

Member Function Documentation

bool core::scoring::FACTSPoseInfo::being_packed ( Size const  seqpos) const

inline

Definition at line 238 of file FACTSPotential.hh.

Referenced by core::scoring::FACTSPotential::build_placeholders(), and core::scoring::FACTSPotential::get_template_born_radii().

basic::datacache::CacheableDataOP core::scoring::FACTSPoseInfo::clone ( ) const

inline

Definition at line 218 of file FACTSPotential.hh.

void core::scoring::FACTSPoseInfo::initialize

(

pose::Pose const &

pose)

Definition at line 260 of file FACTSPotential.cc.

References being_packed_, placeholder_info_, placeholder_residue_, core::pose::Pose::residue(), residue_info_, and core::pose::Pose::total_residue().

FACTSResidueInfo const& core::scoring::FACTSPoseInfo::placeholder_info ( Size const  seqpos) const

inline

Definition at line 245 of file FACTSPotential.hh.

Residue const& core::scoring::FACTSPoseInfo::placeholder_residue ( Size const  seqpos) const

inline

Definition at line 251 of file FACTSPotential.hh.

FACTSResidueInfo& core::scoring::FACTSPoseInfo::residue_info ( Size const  i)

inline

Definition at line 228 of file FACTSPotential.hh.

Referenced by core::scoring::FACTSPotential::eval_atom_nonpolar_derivative(), core::scoring::FACTSPotential::eval_atom_polar_derivative(), core::scoring::FACTSPotential::get_single_rotamer_born_radii(), core::scoring::FACTSPotential::get_template_born_radii(), core::scoring::methods::FACTSEnergy::residue_pair_energy(), and core::scoring::FACTSPotential::update_residue_for_packing().

FACTSResidueInfo const& core::scoring::FACTSPoseInfo::residue_info ( Size const  i) const

inline

Definition at line 233 of file FACTSPotential.hh.

void core::scoring::FACTSPoseInfo::set_placeholder	(	Size const	i,
		ResidueOP	rsd,
		FACTSResidueInfoOP	info
	)

Definition at line 277 of file FACTSPotential.cc.

References placeholder_info_, and placeholder_residue_.

Referenced by core::scoring::FACTSPotential::build_placeholders().

void core::scoring::FACTSPoseInfo::set_repack_list

(

utility::vector1< bool > const &

repacking_residues)

Definition at line 283 of file FACTSPotential.cc.

References being_packed_, and size().

Size core::scoring::FACTSPoseInfo::size ( ) const

inline

Definition at line 223 of file FACTSPotential.hh.

Referenced by FACTSPoseInfo(), core::scoring::FACTSPotential::get_template_born_radii(), and set_repack_list().

Member Data Documentation

utility::vector1< bool > core::scoring::FACTSPoseInfo::being_packed_

Definition at line 265 of file FACTSPotential.hh.

Referenced by FACTSPoseInfo(), initialize(), and set_repack_list().

utility::vector1< FACTSResidueInfoOP > core::scoring::FACTSPoseInfo::placeholder_info_

Definition at line 264 of file FACTSPotential.hh.

Referenced by FACTSPoseInfo(), initialize(), and set_placeholder().

utility::vector1< ResidueOP > core::scoring::FACTSPoseInfo::placeholder_residue_

Definition at line 263 of file FACTSPotential.hh.

Referenced by FACTSPoseInfo(), initialize(), and set_placeholder().

utility::vector1< FACTSResidueInfoOP > core::scoring::FACTSPoseInfo::residue_info_

Definition at line 262 of file FACTSPotential.hh.

Referenced by FACTSPoseInfo(), and initialize().

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The documentation for this class was generated from the following files:

• src/core/scoring/FACTSPotential.hh
• src/core/scoring/FACTSPotential.cc