| AlaScan() | protocols::simple_filters::AlaScan | inline |
| AlaScan(bool const chain1, bool const chain2, core::Size const repeats, core::Real const dist, core::scoring::ScoreFunctionCOP scorefxn, core::Size const jump, bool const symmetry) | protocols::simple_filters::AlaScan | |
| apply(core::pose::Pose const &) const | protocols::simple_filters::AlaScan | inlinevirtual |
| protocols::filters::Filter::apply(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| chain1(bool const c1) | protocols::simple_filters::AlaScan | inline |
| chain1() const | protocols::simple_filters::AlaScan | inline |
| chain1_ | protocols::simple_filters::AlaScan | private |
| chain2(bool const c2) | protocols::simple_filters::AlaScan | inline |
| chain2() const | protocols::simple_filters::AlaScan | inline |
| chain2_ | protocols::simple_filters::AlaScan | private |
| clear() | protocols::filters::Filter | inlinevirtual |
| clone() const | protocols::simple_filters::AlaScan | inlinevirtual |
| ddG_for_single_residue(core::pose::Pose const &pose, core::Size const resi) const | protocols::simple_filters::AlaScan | |
| dist(core::Real const d) | protocols::simple_filters::AlaScan | inline |
| dist() const | protocols::simple_filters::AlaScan | inline |
| distance_threshold_ | protocols::simple_filters::AlaScan | private |
| Filter() | protocols::filters::Filter | |
| Filter(std::string const &) | protocols::filters::Filter | |
| Filter(Filter const &) | protocols::filters::Filter | |
| fresh_instance() const | protocols::simple_filters::AlaScan | inlinevirtual |
| get_type() const | protocols::filters::Filter | inlinevirtual |
| get_user_defined_name() const | protocols::filters::Filter | inline |
| jump() const | protocols::simple_filters::AlaScan | inline |
| jump(core::Size const j) | protocols::simple_filters::AlaScan | inline |
| jump_ | protocols::simple_filters::AlaScan | private |
| name() const | protocols::filters::Filter | inlinevirtual |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks) | protocols::filters::Filter | virtual |
| parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::simple_filters::AlaScan | virtual |
| repack(bool const repack) | protocols::simple_filters::AlaScan | |
| repack() const | protocols::simple_filters::AlaScan | |
| repack_ | protocols::simple_filters::AlaScan | private |
| repeats() const | protocols::simple_filters::AlaScan | inline |
| repeats(core::Size const r) | protocols::simple_filters::AlaScan | inline |
| repeats_ | protocols::simple_filters::AlaScan | private |
| report(std::ostream &out, core::pose::Pose const &pose) const | protocols::simple_filters::AlaScan | virtual |
| report_sm(core::pose::Pose const &) const | protocols::simple_filters::AlaScan | inlinevirtual |
| report_symmetry(std::ostream &out, core::pose::Pose const &pose) const | protocols::simple_filters::AlaScan | |
| score(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| score(core::pose::Pose &pose) | protocols::filters::Filter | virtual |
| scorefxn(core::scoring::ScoreFunctionOP scorefxn) | protocols::simple_filters::AlaScan | |
| scorefxn_ | protocols::simple_filters::AlaScan | private |
| scorename_ | protocols::filters::Filter | protected |
| set_user_defined_name(std::string const &name) | protocols::filters::Filter | inline |
| symmetry_ | protocols::simple_filters::AlaScan | private |
| ~AlaScan() | protocols::simple_filters::AlaScan | virtual |
| ~Filter() | protocols::filters::Filter | virtual |