| apply(core::pose::Pose const &pose) const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| apply(core::io::serialization::PipeMap &pmap) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| clear() | protocols::filters::Filter | inlinevirtual |
| clone() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| compute(core::pose::Pose const &pose, bool const &write) const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| Filter() | protocols::filters::Filter | |
| Filter(std::string const &) | protocols::filters::Filter | |
| Filter(Filter const &) | protocols::filters::Filter | |
| fresh_instance() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| get_type() const | protocols::filters::Filter | inlinevirtual |
| get_user_defined_name() const | protocols::filters::Filter | inline |
| mutation_threshold() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| mutation_threshold(core::Size const mut) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| mutation_threshold_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| mutations() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| mutations(bool const muts) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| mutations_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| name() const | protocols::filters::Filter | inlinevirtual |
| parent typedef | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| rate_threshold() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| rate_threshold(core::Real const rate) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| rate_threshold_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| reference_pose() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| reference_pose(core::pose::PoseCOP reference_pose) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| reference_pose(core::pose::Pose const &pose) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| reference_pose_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| report(std::ostream &out, core::pose::Pose const &pose) const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| report_sm(core::pose::Pose const &pose) const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
| score(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| score(core::pose::Pose &pose) | protocols::filters::Filter | virtual |
| scorename_ | protocols::filters::Filter | protected |
| SequenceRecoveryFilter() | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| set_user_defined_name(std::string const &name) | protocols::filters::Filter | inline |
| task_factory() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| task_factory(core::pack::task::TaskFactoryOP task_factory) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| task_factory_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| verbose() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| verbose(bool const verb) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| verbose_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| write2pdb() const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| write2pdb(bool const write) | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| write2pdb_ | protocols::protein_interface_design::filters::SequenceRecoveryFilter | private |
| write_to_pdb(std::map< core::Size, std::string > const &res_names1, std::map< core::Size, std::string > const &res_names2) const | protocols::protein_interface_design::filters::SequenceRecoveryFilter | |
| ~Filter() | protocols::filters::Filter | virtual |
| ~SequenceRecoveryFilter() | protocols::protein_interface_design::filters::SequenceRecoveryFilter | virtual |
1.8.4