protocols::antibody2::H3RefineCCD Member List

This is the complete list of members for protocols::antibody2::H3RefineCCD, including all inherited members.

ab_info_	protocols::antibody2::H3RefineCCD	private
allow_repack_	protocols::antibody2::H3RefineCCD	private
apply(core::pose::Pose &pose)	protocols::antibody2::H3RefineCCD	virtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
benchmark_	protocols::antibody2::H3RefineCCD	private
cdrh3_map_	protocols::antibody2::H3RefineCCD	private
change_FT_to_flankloop_	protocols::antibody2::H3RefineCCD	private
change_FT_to_simpleloop_	protocols::antibody2::H3RefineCCD	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::antibody2::H3RefineCCD	virtual
create()	protocols::moves::Mover	virtual
cutpoint_	protocols::antibody2::H3RefineCCD	private
Filters_map typedef	protocols::moves::Mover
finalize_setup(core::pose::Pose &pose)	protocols::antibody2::H3RefineCCD	private
flank_cdrh3_map_	protocols::antibody2::H3RefineCCD	private
flank_relax_	protocols::antibody2::H3RefineCCD	private
flank_size_	protocols::antibody2::H3RefineCCD	private
fresh_instance() const	protocols::moves::Mover	virtual
gamma_	protocols::antibody2::H3RefineCCD	private
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const	protocols::antibody2::H3RefineCCD	virtual
get_native_pose() const	protocols::moves::Mover
get_type() const	protocols::moves::Mover	inline
H3_filter_	protocols::antibody2::H3RefineCCD	private
H3RefineCCD()	protocols::antibody2::H3RefineCCD
H3RefineCCD(AntibodyInfoOP antibody_info, AntibodyCDRNameEnum loop_name)	protocols::antibody2::H3RefineCCD
H3RefineCCD(AntibodyInfoOP antibody_info, AntibodyCDRNameEnum loop_name, core::scoring::ScoreFunctionCOP highres_scorefxn)	protocols::antibody2::H3RefineCCD
H3RefineCCD(AntibodyInfoOP antibody_info)	protocols::antibody2::H3RefineCCD
high_cst_	protocols::antibody2::H3RefineCCD	private
high_move_temp_	protocols::antibody2::H3RefineCCD	private
highres_scorefxn_	protocols::antibody2::H3RefineCCD	private
include_neighbors_	protocols::antibody2::H3RefineCCD	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
init()	protocols::antibody2::H3RefineCCD	private
init_temp_	protocols::antibody2::H3RefineCCD	private
inner_cycles_	protocols::antibody2::H3RefineCCD	private
is_camelid_	protocols::antibody2::H3RefineCCD	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
last_temp_	protocols::antibody2::H3RefineCCD	private
loop_begin_	protocols::antibody2::H3RefineCCD	private
loop_end_	protocols::antibody2::H3RefineCCD	private
loop_min_mover_	protocols::antibody2::H3RefineCCD	private
loop_name_	protocols::antibody2::H3RefineCCD	private
loop_repack_	protocols::antibody2::H3RefineCCD	private
loop_size_	protocols::antibody2::H3RefineCCD	private
max_cycle_close_trial_	protocols::antibody2::H3RefineCCD	private
mc_	protocols::antibody2::H3RefineCCD	private
min_tolerance_	protocols::antibody2::H3RefineCCD	private
minimization_type_	protocols::antibody2::H3RefineCCD	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
n_small_moves_	protocols::antibody2::H3RefineCCD	private
name()	protocols::moves::Mover	inlinestatic
neighbor_dist_	protocols::antibody2::H3RefineCCD	private
operator=(Mover const &other)	protocols::moves::Mover
outer_cycles_	protocols::antibody2::H3RefineCCD	private
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)	protocols::moves::Mover	virtual
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)	protocols::moves::Mover	virtual
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
pass_start_pose(core::pose::Pose &start_pose)	protocols::antibody2::H3RefineCCD
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
refine_input_loop_	protocols::antibody2::H3RefineCCD	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
save_state(SerializableState &state)	protocols::moves::Mover	virtual
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_default()	protocols::antibody2::H3RefineCCD	private
set_highres_score_func(core::scoring::ScoreFunctionCOP highres_scorefxn)	protocols::antibody2::H3RefineCCD	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_task_factory(pack::task::TaskFactoryCOP tf)	protocols::antibody2::H3RefineCCD
start_pose_	protocols::antibody2::H3RefineCCD	private
Strings typedef	protocols::moves::Mover
TagPtr typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
tf_	protocols::antibody2::H3RefineCCD	private
the_loop_	protocols::antibody2::H3RefineCCD	private
turn_off_flank_relax()	protocols::antibody2::H3RefineCCD	inline
turn_off_h3_filter()	protocols::antibody2::H3RefineCCD	inline
turn_on_benchmark()	protocols::antibody2::H3RefineCCD	inline
type() const	protocols::moves::Mover	inline
type(const std::string &type_in)	protocols::moves::Mover	inline
user_defined_	protocols::antibody2::H3RefineCCD	private
wiggle_cdr_h3_	protocols::antibody2::H3RefineCCD	private
~H3RefineCCD()	protocols::antibody2::H3RefineCCD
~Mover()	protocols::moves::Mover	virtual