DockDesignParser.hh

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// vi: set ts=2 noet:
//
// (c) Copyright Rosetta Commons Member Institutions.
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/// @file   protocols/jd2/DockDesignParser.hh
/// @brief  header file for Parser class, part of August 2008 job distributor
/// @author Sarel Fleishman sarelf@u.washington.edu


#ifndef INCLUDED_protocols_jd2_DockDesignParser_hh
#define INCLUDED_protocols_jd2_DockDesignParser_hh

//unit headers
#include <protocols/moves/Mover.fwd.hh>
#include <protocols/jd2/Job.fwd.hh>
#include <protocols/jd2/Parser.hh>

#include <protocols/moves/MoverFactory.fwd.hh>
//#include <protocols/protein_interface_design/DockDesignFilterFactory.fwd.hh>

//project headers
#include <core/pose/Pose.fwd.hh>

//utility headers
// AUTO-REMOVED #include <basic/options/option.hh>

#include <utility/vector1.hh>
#include <utility/options/StringVectorOption.fwd.hh>
#include <iostream>


namespace protocols {
namespace jd2 {

/// @brief Reading the xml file and generating the mover
class DockDesignParser : public Parser
{
public:
  typedef protocols::moves::MoverFactory MoverFactory;
  typedef protocols::moves::MoverFactoryOP MoverFactoryOP;
  //typedef protocols::protein_interface_design::DockDesignFilterFactory DockDesignFilterFactory;
  //typedef protocols::protein_interface_design::DockDesignFilterFactoryOP DockDesignFilterFactoryOP;

public:
  DockDesignParser();
  virtual ~DockDesignParser();

  virtual
  bool
  generate_mover_from_pose( JobCOP job, Pose & pose, MoverOP & mover, bool new_input, std::string const xml_fname );

  void register_factory_prototypes();

private:
  //MoverFactoryOP mover_factory_;

  //DockDesignFilterFactoryOP ddfilter_factory_;

  static
  void
  substitute_variables_in_stream( std::istream & in, utility::options::StringVectorOption const& script_vars, std::stringstream & out);

}; // Parser

} // namespace jd2
} // namespace protocols

#endif //INCLUDED_protocols_jd2_DockDesignParser_HH