core::scoring::etable::MembEtable Member List

This is the complete list of members for core::scoring::etable::MembEtable, including all inherited members.

add_long_range_damping	core::scoring::etable::MembEtable	private
analytic_etable_derivatives(conformation::Atom const &at1, conformation::Atom const &at2, Real &dljatrE_ddis, Real &dljrepE_ddis, Real &dfasolE_ddis, Real &inv_d) const	core::scoring::etable::Etable	inline
analytic_etable_evaluation(conformation::Atom const &at1, conformation::Atom const &at2, Real &lj_atrE, Real &lj_repE, Real &fa_solE, Real &d2) const	core::scoring::etable::Etable	inline
atom_set() const	core::scoring::etable::MembEtable	inline
atom_set() const	core::scoring::etable::MembEtable	inline
atom_set_	core::scoring::etable::MembEtable	private
atom_type(int const type)	core::scoring::etable::MembEtable	inlineprivate
atom_type(int const type)	core::scoring::etable::MembEtable	inlineprivate
bins_per_A2	core::scoring::etable::MembEtable	private
calc_etable_value(Real &dis2, int &atype1, int &atype2, Real &solvE1, Real &solvE2, Real &dsolvE1, Real &dsolvE2, ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, Real &memb_solvE1, Real &memb_solvE2, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value, Real &memb_dsolvE1, Real &memb_dsolvE2)	core::scoring::etable::MembEtable	private
calc_etable_value(Real &dis2, int &atype1, int &atype2, Real &solvE1, Real &solvE2, Real &dsolvE1, Real &dsolvE2, ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, Real &memb_solvE1, Real &memb_solvE2, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value, Real &memb_dsolvE1, Real &memb_dsolvE2)	core::scoring::etable::MembEtable	private
copy_from(Etable const *source)	core::scoring::etable::MembEtable
copy_from(Etable const *source)	core::scoring::etable::MembEtable
dljatr() const	core::scoring::etable::Etable	inline
dljrep() const	core::scoring::etable::Etable	inline
dsolv() const	core::scoring::etable::Etable	inline
dsolv1() const	core::scoring::etable::MembEtable	inline
dsolv1() const	core::scoring::etable::MembEtable	inline
dsolv1_	core::scoring::etable::MembEtable	private
dsolv2() const	core::scoring::etable::MembEtable	inline
dsolv2() const	core::scoring::etable::MembEtable	inline
dsolv2_	core::scoring::etable::MembEtable	private
epsilon	core::scoring::etable::MembEtable	private
Etable typedef	core::scoring::etable::MembEtable
Etable typedef	core::scoring::etable::MembEtable
core::scoring::etable::Etable::Etable(chemical::AtomTypeSetCAP atom_set_in, EtableOptions const &options, std::string const alternate_parameter_set="")	core::scoring::etable::Etable
etable_disbins	core::scoring::etable::MembEtable	private
eval_spline(Real const x, Real const xlo, Real const xhi, SplineParameters const &sp)	core::scoring::etable::Etable	inlinestatic
eval_spline(Real const x, Real const xlo, Real const xhi, Real const width, Real const invwidth, SplineParameters const &sp)	core::scoring::etable::Etable	inlinestatic
get_bins_per_A2() const	core::scoring::etable::MembEtable	inline
get_bins_per_A2() const	core::scoring::etable::MembEtable	inline
get_safe_max_dis2() const	core::scoring::etable::MembEtable	inline
get_safe_max_dis2() const	core::scoring::etable::MembEtable	inline
hydrogen_interaction_cutoff2() const	core::scoring::etable::MembEtable	inline
hydrogen_interaction_cutoff2() const	core::scoring::etable::MembEtable	inline
hydrogen_interaction_cutoff2_	core::scoring::etable::MembEtable	private
input_etable(ObjexxFCL::FArray3D< Real > &etable, const std::string label, std::istream &in)	core::scoring::etable::MembEtable	private
input_etable(ObjexxFCL::FArray3D< Real > &etable, const std::string label, std::istream &in)	core::scoring::etable::MembEtable	private
interpolated_analytic_etable_evaluation(conformation::Atom const &at1, conformation::Atom const &at2, Real &lj_atrE, Real &lj_repE, Real &fa_solE, Real &d2) const	core::scoring::etable::Etable
lj_hbond_accOch_dis	core::scoring::etable::MembEtable	private
lj_hbond_accOch_hdis	core::scoring::etable::MembEtable	private
lj_hbond_dis	core::scoring::etable::MembEtable	private
lj_hbond_hdis	core::scoring::etable::MembEtable	private
lj_radius(int const i) const	core::scoring::etable::MembEtable	inline
lj_radius(int const i) const	core::scoring::etable::MembEtable	inline
lj_radius_	core::scoring::etable::MembEtable	private
lj_slope_intercept	core::scoring::etable::MembEtable	private
lj_switch_dis2sigma	core::scoring::etable::MembEtable	private
lj_use_hbond_radii	core::scoring::etable::MembEtable	private
lj_use_lj_deriv_slope	core::scoring::etable::MembEtable	private
lj_use_water_radii	core::scoring::etable::MembEtable	private
lj_water_dis	core::scoring::etable::MembEtable	private
lj_water_hdis	core::scoring::etable::MembEtable	private
lj_wdepth(int const i) const	core::scoring::etable::Etable	inline
ljatr() const	core::scoring::etable::Etable	inline
ljrep() const	core::scoring::etable::Etable	inline
lk_dgfree(int const i) const	core::scoring::etable::MembEtable	inline
lk_dgfree(int const i) const	core::scoring::etable::MembEtable	inline
lk_dgfree_	core::scoring::etable::MembEtable	private
lk_dgrefce() const	core::scoring::etable::MembEtable	inline
lk_dgrefce() const	core::scoring::etable::MembEtable	inline
lk_dgrefce_	core::scoring::etable::MembEtable	private
lk_lambda(int const i) const	core::scoring::etable::MembEtable	inline
lk_lambda(int const i) const	core::scoring::etable::MembEtable	inline
lk_lambda_	core::scoring::etable::MembEtable	private
lk_min_dis2sigma	core::scoring::etable::MembEtable	private
lk_volume(int const i) const	core::scoring::etable::MembEtable	inline
lk_volume(int const i) const	core::scoring::etable::MembEtable	inline
lk_volume_	core::scoring::etable::MembEtable	private
long_range_damping_length	core::scoring::etable::MembEtable	private
make_pairenergy_table()	core::scoring::etable::MembEtable	private
make_pairenergy_table()	core::scoring::etable::MembEtable	private
max_dis() const	core::scoring::etable::MembEtable	inline
max_dis() const	core::scoring::etable::MembEtable	inline
max_dis2	core::scoring::etable::MembEtable	private
max_dis_	core::scoring::etable::MembEtable	private
max_heavy_heavy_cutoff() const	core::scoring::etable::Etable	inline
max_heavy_hydrogen_cutoff() const	core::scoring::etable::Etable	inline
max_hydrogen_hydrogen_cutoff() const	core::scoring::etable::Etable	inline
max_hydrogen_lj_radius() const	core::scoring::etable::MembEtable
max_hydrogen_lj_radius() const	core::scoring::etable::MembEtable
max_hydrogen_lj_radius_	core::scoring::etable::MembEtable	private
max_non_hydrogen_lj_radius() const	core::scoring::etable::MembEtable
max_non_hydrogen_lj_radius() const	core::scoring::etable::MembEtable
max_non_hydrogen_lj_radius_	core::scoring::etable::MembEtable	private
memb_dsolv1() const	core::scoring::etable::MembEtable	inline
memb_dsolv1() const	core::scoring::etable::MembEtable	inline
memb_dsolv1_	core::scoring::etable::MembEtable	private
memb_dsolv2() const	core::scoring::etable::MembEtable	inline
memb_dsolv2() const	core::scoring::etable::MembEtable	inline
memb_dsolv2_	core::scoring::etable::MembEtable	private
memb_lk_dgfree(int const i) const	core::scoring::etable::MembEtable	inline
memb_lk_dgfree(int const i) const	core::scoring::etable::MembEtable	inline
memb_lk_dgfree_	core::scoring::etable::MembEtable	private
memb_lk_dgrefce() const	core::scoring::etable::MembEtable	inline
memb_lk_dgrefce() const	core::scoring::etable::MembEtable	inline
memb_lk_dgrefce_	core::scoring::etable::MembEtable	private
memb_solv1() const	core::scoring::etable::MembEtable	inline
memb_solv1() const	core::scoring::etable::MembEtable	inline
memb_solv1_	core::scoring::etable::MembEtable	private
memb_solv2() const	core::scoring::etable::MembEtable	inline
memb_solv2() const	core::scoring::etable::MembEtable	inline
memb_solv2_	core::scoring::etable::MembEtable	private
MembEtable(chemical::AtomTypeSetCAP atom_set_in, EtableOptions const &options, std::string const alternate_parameter_set="")	core::scoring::etable::MembEtable
MembEtable(chemical::AtomTypeSetCAP atom_set_in, EtableOptions const &options, std::string const alternate_parameter_set="")	core::scoring::etable::MembEtable
min_dis	core::scoring::etable::MembEtable	private
min_dis2	core::scoring::etable::MembEtable	private
modify_pot()	core::scoring::etable::MembEtable	private
modify_pot()	core::scoring::etable::MembEtable	private
n_atomtypes	core::scoring::etable::MembEtable	private
core::scoring::etable::Etable::n_atomtypes() const	core::scoring::etable::Etable	inline
nblist_dis2_cutoff_HH() const	core::scoring::etable::MembEtable	inline
nblist_dis2_cutoff_HH() const	core::scoring::etable::MembEtable	inline
nblist_dis2_cutoff_HH_	core::scoring::etable::MembEtable	private
nblist_dis2_cutoff_XH() const	core::scoring::etable::MembEtable	inline
nblist_dis2_cutoff_XH() const	core::scoring::etable::MembEtable	inline
nblist_dis2_cutoff_XH_	core::scoring::etable::MembEtable	private
nblist_dis2_cutoff_XX() const	core::scoring::etable::MembEtable	inline
nblist_dis2_cutoff_XX() const	core::scoring::etable::MembEtable	inline
nblist_dis2_cutoff_XX_	core::scoring::etable::MembEtable	private
output_etable(ObjexxFCL::FArray3D< Real > &etable, std::string label, std::ostream &out)	core::scoring::etable::MembEtable	private
output_etable(ObjexxFCL::FArray3D< Real > &etable, std::string label, std::ostream &out)	core::scoring::etable::MembEtable	private
precalc_etable_coefficients(ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value)	core::scoring::etable::MembEtable	private
precalc_etable_coefficients(ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value)	core::scoring::etable::MembEtable	private
safe_max_dis2	core::scoring::etable::MembEtable	private
smooth_etables()	core::scoring::etable::MembEtable	private
smooth_etables()	core::scoring::etable::MembEtable	private
solv1() const	core::scoring::etable::MembEtable	inline
solv1() const	core::scoring::etable::MembEtable	inline
solv1_	core::scoring::etable::MembEtable	private
solv2() const	core::scoring::etable::MembEtable	inline
solv2() const	core::scoring::etable::MembEtable	inline
solv2_	core::scoring::etable::MembEtable	private
spline_deriv(Real const x, Real const xlo, Real const xhi, SplineParameters const &sp)	core::scoring::etable::Etable	inlinestatic
spline_deriv(Real const x, Real const xlo, Real const xhi, Real const width, Real const invwidth, SplineParameters const &sp)	core::scoring::etable::Etable	inlinestatic
Wradius	core::scoring::etable::MembEtable	private
~Etable()	core::scoring::etable::Etable	virtual