protocols::abinitio::AllResiduesChanged Class Reference

(helper) functor class which keeps track of initial phi/psi values. calls of operator ( pose ) compare the initial phi/psi values More...

#include <AllResiduesChanged.hh>

Inheritance diagram for protocols::abinitio::AllResiduesChanged:

Collaboration diagram for protocols::abinitio::AllResiduesChanged:

Public Member Functions
	AllResiduesChanged (core::pose::Pose const &pose, core::fragment::InsertMap const &insert_map, core::kinematics::MoveMap const &mm)
	AllResiduesChanged (core::pose::Pose const &pose)
void	show_unmoved (const core::pose::Pose &pose, std::ostream &out)
virtual bool	operator() (const core::pose::Pose &pose)
	AllResiduesChanged (core::pose::Pose const &pose, core::fragment::InsertMap const &insert_map)
virtual bool	operator() (const core::pose::Pose &pose)
Public Member Functions inherited from protocols::moves::PoseCondition
	PoseCondition ()
virtual	~PoseCondition ()
	WhileMover. More...

Private Member Functions
void	compute_insert_pos (core::fragment::InsertMap const &insert_map, core::kinematics::MoveMap const &mm)
void	set_initial_pose (const core::pose::Pose &pose)
void	compute_insert_pos (core::fragment::InsertMap const &insert_map)
void	set_initial_pose (const core::pose::Pose &pose)

Private Attributes
utility::vector1< core::Real >	initial_phis
utility::vector1< core::Real >	initial_psis
bool	initialized_
std::string	original_sequence_
utility::vector1< bool >	insert_pos_

Detailed Description

(helper) functor class which keeps track of initial phi/psi values. calls of operator ( pose ) compare the initial phi/psi values

to the current values of the given pose. Returns false once all phi/psi values have been modified.

Definition at line 36 of file AllResiduesChanged.hh.

Constructor & Destructor Documentation

protocols::abinitio::AllResiduesChanged::AllResiduesChanged ( core::pose::Pose const &  pose, core::fragment::InsertMap const &  insert_map, core::kinematics::MoveMap const &  mm  )

inline

Definition at line 38 of file AllResiduesChanged.hh.

References compute_insert_pos(), and set_initial_pose().

protocols::abinitio::AllResiduesChanged::AllResiduesChanged ( core::pose::Pose const &  pose)

inline

Definition at line 48 of file AllResiduesChanged.hh.

References set_initial_pose().

protocols::abinitio::AllResiduesChanged::AllResiduesChanged ( core::pose::Pose const &  pose, core::fragment::InsertMap const &  insert_map  )

inline

Definition at line 1084 of file MembraneAbinitio.cc.

Member Function Documentation

void protocols::abinitio::AllResiduesChanged::compute_insert_pos ( core::fragment::InsertMap const &  insert_map, core::kinematics::MoveMap const &  mm  )

inlineprivate

Definition at line 56 of file AllResiduesChanged.hh.

References core::kinematics::MoveMap::get_bb(), and insert_pos_.

Referenced by AllResiduesChanged().

void protocols::abinitio::AllResiduesChanged::compute_insert_pos ( core::fragment::InsertMap const &  insert_map)

inlineprivate

Definition at line 1092 of file MembraneAbinitio.cc.

virtual bool protocols::abinitio::AllResiduesChanged::operator() ( const core::pose::Pose &  pose)

inlinevirtual

Implements protocols::moves::PoseCondition.

Definition at line 95 of file AllResiduesChanged.hh.

References initial_phis, initial_psis, insert_pos_, core::conformation::Residue::is_protein(), original_sequence_, core::pose::Pose::phi(), core::pose::Pose::psi(), core::pose::Pose::residue(), core::pose::Pose::sequence(), and core::pose::Pose::total_residue().

virtual bool protocols::abinitio::AllResiduesChanged::operator() ( const core::pose::Pose &  pose)

inlinevirtual

Implements protocols::moves::PoseCondition.

Definition at line 1111 of file MembraneAbinitio.cc.

References core::pose::Pose::phi(), core::pose::Pose::psi(), core::pose::Pose::sequence(), and core::pose::Pose::total_residue().

void protocols::abinitio::AllResiduesChanged::set_initial_pose ( const core::pose::Pose &  pose)

inlineprivate

Definition at line 69 of file AllResiduesChanged.hh.

References initial_phis, initial_psis, core::conformation::Residue::is_protein(), original_sequence_, core::pose::Pose::phi(), core::pose::Pose::psi(), core::pose::Pose::residue(), core::pose::Pose::sequence(), and core::pose::Pose::total_residue().

Referenced by AllResiduesChanged().

void protocols::abinitio::AllResiduesChanged::set_initial_pose ( const core::pose::Pose &  pose)

inlineprivate

Definition at line 1101 of file MembraneAbinitio.cc.

References core::pose::Pose::phi(), core::pose::Pose::psi(), core::pose::Pose::sequence(), and core::pose::Pose::total_residue().

void protocols::abinitio::AllResiduesChanged::show_unmoved ( const core::pose::Pose &  pose, std::ostream &  out  )

inline

Definition at line 80 of file AllResiduesChanged.hh.

References initial_phis, initial_psis, insert_pos_, core::conformation::Residue::is_protein(), original_sequence_, core::pose::Pose::phi(), core::pose::Pose::psi(), core::pose::Pose::residue(), core::pose::Pose::sequence(), and core::pose::Pose::total_residue().

Referenced by protocols::abinitio::ClassicAbinitio::do_stage1_cycles().

Member Data Documentation

utility::vector1< core::Real > protocols::abinitio::AllResiduesChanged::initial_phis

private

Definition at line 110 of file AllResiduesChanged.hh.

Referenced by operator()(), set_initial_pose(), and show_unmoved().

utility::vector1< core::Real > protocols::abinitio::AllResiduesChanged::initial_psis

private

Definition at line 111 of file AllResiduesChanged.hh.

Referenced by operator()(), set_initial_pose(), and show_unmoved().

bool protocols::abinitio::AllResiduesChanged::initialized_

private

Definition at line 113 of file AllResiduesChanged.hh.

utility::vector1< bool > protocols::abinitio::AllResiduesChanged::insert_pos_

private

Definition at line 116 of file AllResiduesChanged.hh.

Referenced by compute_insert_pos(), operator()(), and show_unmoved().

std::string protocols::abinitio::AllResiduesChanged::original_sequence_

private

Definition at line 115 of file AllResiduesChanged.hh.

Referenced by operator()(), set_initial_pose(), and show_unmoved().

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The documentation for this class was generated from the following files:

• src/protocols/abinitio/AllResiduesChanged.hh
• src/protocols/abinitio/MembraneAbinitio.cc