protocols::toolbox::pose_metric_calculators::RotamerRecovery Class Reference

#include <RotamerRecovery.hh>

Public Member Functions
	RotamerRecovery ()
char	torsion2big_bin (float const phi, float const psi, float const omega)
utility::vector1< char >	get_ss (core::pose::Pose &pose)
void	print_rot_vec (core::pack::dunbrack::RotVector rot_vec, std::ostream &out)
utility::vector1< char >	bb_bins_from_pose (core::pose::Pose const &pose)
utility::vector1 < core::pack::dunbrack::RotVector >	rots_from_pose (core::pose::Pose const &pose)
utility::vector1 < utility::vector1< core::Real > >	chis_from_pose (core::pose::Pose const &pose)
void	get_rotamer_recovery (core::pose::Pose &native, utility::vector1< core::pose::Pose > &compared_poses)
void	get_rotamer_recovery (core::pose::Pose &native, core::pose::Pose &compared_pose)

Detailed Description

Definition at line 59 of file RotamerRecovery.hh.

Constructor & Destructor Documentation

protocols::toolbox::pose_metric_calculators::RotamerRecovery::RotamerRecovery ( )

inline

Definition at line 61 of file RotamerRecovery.hh.

Member Function Documentation

utility::vector1< char > protocols::toolbox::pose_metric_calculators::RotamerRecovery::bb_bins_from_pose

(

core::pose::Pose const &

pose)

Definition at line 128 of file RotamerRecovery.cc.

References core::conformation::Residue::mainchain_torsion(), core::pose::Pose::residue(), torsion2big_bin(), and core::pose::Pose::total_residue().

Referenced by get_rotamer_recovery().

utility::vector1< utility::vector1< core::Real > > protocols::toolbox::pose_metric_calculators::RotamerRecovery::chis_from_pose

(

core::pose::Pose const &

pose)

Definition at line 160 of file RotamerRecovery.cc.

References core::pose::Pose::chi(), core::conformation::Residue::nchi(), core::pose::Pose::residue(), and core::pose::Pose::total_residue().

Referenced by get_rotamer_recovery().

void protocols::toolbox::pose_metric_calculators::RotamerRecovery::get_rotamer_recovery	(	core::pose::Pose &	native,
		utility::vector1< core::pose::Pose > &	compared_poses
	)

Definition at line 185 of file RotamerRecovery.cc.

References protocols::comparative_modeling::features::A, bb_bins_from_pose(), chis_from_pose(), rots_from_pose(), core::io::serialization::size(), and core::pose::Pose::total_residue().

Referenced by get_rotamer_recovery().

void protocols::toolbox::pose_metric_calculators::RotamerRecovery::get_rotamer_recovery	(	core::pose::Pose &	native,
		core::pose::Pose &	compared_pose
	)

Definition at line 178 of file RotamerRecovery.cc.

References get_rotamer_recovery().

utility::vector1< char > protocols::toolbox::pose_metric_calculators::RotamerRecovery::get_ss

(

core::pose::Pose &

pose)

Definition at line 104 of file RotamerRecovery.cc.

References core::scoring::dssp::Dssp::insert_ss_into_pose(), core::pose::Pose::secstruct(), and core::pose::Pose::total_residue().

void protocols::toolbox::pose_metric_calculators::RotamerRecovery::print_rot_vec	(	core::pack::dunbrack::RotVector	rot_vec,
		std::ostream &	out
	)

Definition at line 115 of file RotamerRecovery.cc.

utility::vector1< core::pack::dunbrack::RotVector > protocols::toolbox::pose_metric_calculators::RotamerRecovery::rots_from_pose

(

core::pose::Pose const &

pose)

Definition at line 145 of file RotamerRecovery.cc.

References core::pose::Pose::residue(), rot(), core::pack::dunbrack::rotamer_from_chi(), and core::pose::Pose::total_residue().

Referenced by get_rotamer_recovery().

char protocols::toolbox::pose_metric_calculators::RotamerRecovery::torsion2big_bin	(	float const	phi,
		float const	psi,
		float const	omega
	)

Definition at line 81 of file RotamerRecovery.cc.

Referenced by bb_bins_from_pose().

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The documentation for this class was generated from the following files:

• src/protocols/toolbox/pose_metric_calculators/RotamerRecovery.hh
• src/protocols/toolbox/pose_metric_calculators/RotamerRecovery.cc