RestrictNativeResiduesOperation.hh

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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
// vi: set ts=2 noet:
//
// (c) Copyright Rosetta Commons Member Institutions.
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// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
// (c) addressed to University of Washington UW TechTransfer, email: license@u.washington.edu.

/// @file protocols/toolbox/task_operations/RestrictNativeResiduesOperation.hh
/// @brief Restrict every residue in the current pose that is native to repacking. ie, only allow mutated positions to be designed.
/// @author Jacob Bale, balej@u.washington.edu

#ifndef INCLUDED_protocols_toolbox_task_operations_RestrictNativeResiduesOperation_hh
#define INCLUDED_protocols_toolbox_task_operations_RestrictNativeResiduesOperation_hh

// unit headers
#include <protocols/toolbox/task_operations/RestrictNativeResiduesOperation.fwd.hh>

//package headers
#include <core/pack/task/operation/TaskOperation.hh>

//project headers
#include <core/pack/task/PackerTask.fwd.hh>
#include <core/types.hh>

// Utility Headers
#include <utility/tag/Tag.fwd.hh>
#include <utility/vector1.hh>

using namespace core::pack::task;

namespace protocols{
namespace toolbox{
namespace task_operations{

class RestrictNativeResiduesOperation : public core::pack::task::operation::TaskOperation {
public:

  typedef std::string String;
  typedef core::Real Real;
  typedef core::pose::Pose Pose;
  typedef core::pack::task::PackerTask PackerTask;
  typedef core::pack::task::operation::TaskOperation TaskOperation;
  typedef core::pack::task::operation::TaskOperationOP TaskOperationOP;
  typedef TaskOperation parent;
  typedef utility::tag::TagPtr TagPtr;

public:

  /// @brief default constructor
  RestrictNativeResiduesOperation();

  /// @brief destructor
   ~RestrictNativeResiduesOperation();

  /// @brief make clone
  virtual TaskOperationOP clone() const;

public:

  void parse_tag( TagPtr tag );
//  void parse_def( utility::lua::LuaObject const & def );

  /// @brief apply
  virtual void apply( Pose const & pose, PackerTask & task ) const;

  core::pose::PoseCOP reference_pose() const;
  void reference_pose( core::pose::PoseCOP reference_pose );
  void reference_pose( core::pose::Pose const & pose );
  bool verbose() const;
  void verbose( bool const verb );
  bool prevent_repacking() const;
  void prevent_repacking( bool const prev );

private:
  core::pose::PoseCOP reference_pose_;
  bool verbose_,prevent_repacking_;
};


} // TaskOperations
} // toolbox
} // protocols
#endif