#include <RestrictToInterface.hh>

Inheritance diagram for core::pack::task::operation::RestrictToInterface:

Collaboration diagram for core::pack::task::operation::RestrictToInterface:

Public Types
typedef core::pack::task::operation::TaskOperation	TaskOperation

typedef core::pack::task::operation::TaskOperationOP	TaskOperationOP

typedef TaskOperation	parent

Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagPtr	TagPtr

typedef pose::Pose	Pose

Public Member Functions
	RestrictToInterface ()

	RestrictToInterface (core::Size rb_jump_in, core::Real distance_in=8)

	RestrictToInterface (utility::vector1_size rb_jump_in, core::Real distance_in=8)
	Constructor with arguments for multiple jumps. More...

	RestrictToInterface (utility::vector1_size rb_jump_in, ObjexxFCL::FArray1D_bool loop_residues)

	RestrictToInterface (ObjexxFCL::FArray1D_bool loop_residues)

	RestrictToInterface (utility::vector1< bool > loop_residues)

virtual	~RestrictToInterface ()

void	add_jump (core::Size rb_jump_in)

virtual TaskOperationOP	clone () const
	Create another task operation of the type matching the most-derived version of the class. More...

void	rb_jump (core::Size const jump_in)

void	distance (core::Real const distance_in)

void	symmetric_task (core::pose::Pose const &pose, task::PackerTask &task) const

virtual void	apply (core::pose::Pose const &pose, core::pack::task::PackerTask &task) const
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...

virtual void	parse_tag (utility::tag::TagPtr tag)
	Used to parse an xml-like tag to load parameters and properties. More...

Public Member Functions inherited from core::pack::task::operation::TaskOperation
virtual	~TaskOperation ()

virtual void	parse_def (utility::lua::LuaObject const &def)

Private Attributes
utility::vector1_size	rb_jump_

core::Real	distance_

bool	loopy_interface_

ObjexxFCL::FArray1D_bool	loop_residues_

Detailed Description

Definition at line 104 of file RestrictToInterface.hh.

Member Typedef Documentation

typedef TaskOperation core::pack::task::operation::RestrictToInterface::parent

Definition at line 109 of file RestrictToInterface.hh.

typedef core::pack::task::operation::TaskOperation core::pack::task::operation::RestrictToInterface::TaskOperation

Definition at line 107 of file RestrictToInterface.hh.

typedef core::pack::task::operation::TaskOperationOP core::pack::task::operation::RestrictToInterface::TaskOperationOP

Definition at line 108 of file RestrictToInterface.hh.

Constructor & Destructor Documentation

core::pack::task::operation::RestrictToInterface::RestrictToInterface ( )

inline

Definition at line 111 of file RestrictToInterface.hh.

References rb_jump_.

Referenced by clone().

core::pack::task::operation::RestrictToInterface::RestrictToInterface	(	core::Size	rb_jump_in,
		core::Real	distance_in = `8`
	)

inline

Definition at line 116 of file RestrictToInterface.hh.

References rb_jump_.

core::pack::task::operation::RestrictToInterface::RestrictToInterface	(	utility::vector1_size	rb_jump_in,
		core::Real	distance_in = `8`
	)

inline

Constructor with arguments for multiple jumps.

Definition at line 122 of file RestrictToInterface.hh.

References rb_jump_.

core::pack::task::operation::RestrictToInterface::RestrictToInterface	(	utility::vector1_size	rb_jump_in,
		ObjexxFCL::FArray1D_bool	loop_residues
	)

inline

Definition at line 127 of file RestrictToInterface.hh.

References loop_residues_, and rb_jump_.

core::pack::task::operation::RestrictToInterface::RestrictToInterface ( ObjexxFCL::FArray1D_bool loop_residues)

inline

Definition at line 134 of file RestrictToInterface.hh.

References loop_residues_.

protocols::toolbox::task_operations::RestrictToInterface::RestrictToInterface ( utility::vector1< bool > loop_residues)

Definition at line 145 of file RestrictToInterface.cc.

References loop_residues_.

protocols::toolbox::task_operations::RestrictToInterface::~RestrictToInterface ( )

virtual

Definition at line 143 of file RestrictToInterface.cc.

Member Function Documentation

void core::pack::task::operation::RestrictToInterface::add_jump ( core::Size rb_jump_in)

inline

Definition at line 144 of file RestrictToInterface.hh.

References rb_jump_.

Referenced by protocols::simple_moves::ddG::calculate().

void protocols::toolbox::task_operations::RestrictToInterface::apply	(	core::pose::Pose const &	,
		core::pack::task::PackerTask &
	)		const

virtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

Definition at line 166 of file RestrictToInterface.cc.

References distance_, core::conformation::symmetry::is_symmetric(), loop_residues_, loopy_interface_, core::pack::task::PackerTask::nonconst_residue_task(), core::pack::task::ResidueLevelTask::prevent_repacking(), rb_jump_, symmetric_task(), and core::pose::Pose::total_residue().

Referenced by protocols::simple_moves::ddG::calculate(), and protocols::simple_moves::ddG::symm_ddG().

core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::RestrictToInterface::clone ( ) const

virtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

Definition at line 160 of file RestrictToInterface.cc.

References RestrictToInterface().

void protocols::toolbox::task_operations::RestrictToInterface::distance ( core::Real const distance_in)

Definition at line 216 of file RestrictToInterface.cc.

References distance_.

void protocols::toolbox::task_operations::RestrictToInterface::parse_tag ( utility::tag::TagPtr tag)

virtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

Definition at line 221 of file RestrictToInterface.cc.

References distance_, and rb_jump_.

void core::pack::task::operation::RestrictToInterface::rb_jump ( core::Size const jump_in)

Definition at line 211 of file RestrictToInterface.cc.

References rb_jump_.

void protocols::toolbox::task_operations::RestrictToInterface::symmetric_task	(	core::pose::Pose const &	pose,
		task::PackerTask &	task
	)		const

Definition at line 197 of file RestrictToInterface.cc.

References core::pose::Pose::conformation(), core::pack::task::PackerTask::nonconst_residue_task(), core::pack::task::ResidueLevelTask::prevent_repacking(), core::conformation::symmetry::SymmetricConformation::Symmetry_Info(), and core::pose::Pose::total_residue().

Referenced by apply().

Member Data Documentation

core::Real core::pack::task::operation::RestrictToInterface::distance_

private

Definition at line 158 of file RestrictToInterface.hh.

Referenced by apply(), distance(), and parse_tag().

ObjexxFCL::FArray1D_bool core::pack::task::operation::RestrictToInterface::loop_residues_

private

Definition at line 160 of file RestrictToInterface.hh.

Referenced by apply(), protocols::toolbox::task_operations::RestrictToInterface::RestrictToInterface(), and RestrictToInterface().

bool core::pack::task::operation::RestrictToInterface::loopy_interface_

private

Definition at line 159 of file RestrictToInterface.hh.

Referenced by apply().

utility::vector1_size core::pack::task::operation::RestrictToInterface::rb_jump_

private

Definition at line 157 of file RestrictToInterface.hh.

Referenced by add_jump(), apply(), parse_tag(), rb_jump(), and RestrictToInterface().

The documentation for this class was generated from the following files:

src/core/pack/task/operation/RestrictToInterface.hh
src/core/pack/task/operation/RestrictToInterface.cc
src/protocols/toolbox/task_operations/RestrictToInterface.cc

Public Types

Public Member Functions

Private Attributes

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation