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src
protocols
toolbox
pose_metric_calculators
ExplicitWaterUnsatisfiedPolarsCalculator.hh
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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
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// vi: set ts=2 noet:
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//
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// (c) Copyright Rosetta Commons Member Institutions.
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// (c) This file is part of the Rosetta software suite and is made available under license.
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// (c) The Rosetta software is developed by the contributing members of the Rosetta Commons.
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// (c) For more information, see http://www.rosettacommons.org. Questions about this can be
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// (c) addressed to University of Washington UW TechTransfer, email: license@u.washington.edu.
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//////////////////////////////////////////////////////////////////////
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/// @begin ExplicitWaterUnsatisfiedPolarsCalculator
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///
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/// @brief This Calculator tries to solvate all polar groups by
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/// docking explicit TP5 water molecules, then counts
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/// unsatisfied hydrogen bonds using the same criteria in
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/// BuriedUnsatisfiedHydrogenBondCalculator
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///
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///
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///
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///
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///
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///
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///
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///
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///
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///
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///
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///
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///
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///
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/// @author Chris King - dr.chris.king@gmail.com
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///
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///
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/// @last_modified 4.8.2011
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/////////////////////////////////////////////////////////////////////////
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#ifndef INCLUDED_protocols_toolbox_pose_metric_calculators_ExplicitWaterUnsatisfiedPolarsCalculator_hh
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#define INCLUDED_protocols_toolbox_pose_metric_calculators_ExplicitWaterUnsatisfiedPolarsCalculator_hh
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#include <
core/pose/metrics/PoseMetricCalculatorBase.hh
>
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#include <
core/pose/Pose.fwd.hh
>
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#include <
core/types.hh
>
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#include <basic/MetricValue.fwd.hh>
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#include <
core/scoring/ScoreFunction.fwd.hh
>
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namespace
protocols{
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namespace
toolbox {
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namespace
pose_metric_calculators {
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class
ExplicitWaterUnsatisfiedPolarsCalculator
:
public
core::pose::metrics::StructureDependentCalculator
{
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public
:
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//default constructor shell_cutoff is = to 4.0
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ExplicitWaterUnsatisfiedPolarsCalculator
(
core::scoring::ScoreFunctionOP
scorefxn );
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//constructor where you define what the distance cutoff is for the Hydrogen and Acceptor atoms
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ExplicitWaterUnsatisfiedPolarsCalculator
(
core::scoring::ScoreFunctionOP
scorefxn,
core::Real
shell_cutoff );
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core::pose::metrics::PoseMetricCalculatorOP
clone
()
const
{
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return
new
ExplicitWaterUnsatisfiedPolarsCalculator
(
scorefxn_
,
shell_cutoff_
); };
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private
:
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core::Real
shell_cutoff_
;
//water shell approx cutoff (for initial position in docking)
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core::Size
all_unsat_polars_
;
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core::scoring::ScoreFunctionOP
scorefxn_
;
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protected
:
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virtual
void
lookup
(
std::string
const
& key, basic::MetricValueBase * valptr )
const
;
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virtual
std::string
print
(
std::string
const
& key )
const
;
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virtual
void
recompute
(
core::pose::Pose
const
& this_pose );
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};
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}
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}
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}
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#endif
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