#include <LazySilentFileJobInputter.hh>

Inheritance diagram for protocols::jd2::LazySilentFileJobInputter:

Collaboration diagram for protocols::jd2::LazySilentFileJobInputter:

Public Member Functions
	LazySilentFileJobInputter ()

virtual	~LazySilentFileJobInputter ()

virtual void	pose_from_job (core::pose::Pose &pose, JobOP job)
	this function is responsible for filling the pose reference with the pose indicated by the job. The Job object (within its InnerJob) contains a PoseCOP. This function needs to either fill the pose reference from the InnerJob or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference. More...

virtual core::io::silent::SilentStruct const &	struct_from_job (JobOP job)

virtual void	fill_jobs (Jobs &jobs)
	this function determines what jobs exist. This function neither knows nor cares what jobs are already complete on disk/memory - it just figures out what ones should exist given the input. NOTE: your JobInputter should order Job objects in the Jobs vector to have as few "transitions" between inputs as possible (group all Jobs of the same input next to each other). This improves efficiency of the "FAIL_BAD_INPUT" functionality. Note I said "should", not "must". More...

virtual JobInputterInputSource::Enum	input_source () const
	return the type of input source that the JobInputter is currently using More...

core::io::silent::SilentFileData const &	silent_file_data () const

Public Member Functions inherited from protocols::jd2::JobInputter
virtual	~JobInputter ()

Private Attributes
core::io::silent::SilentFileData	sfd_

Additional Inherited Members
Static Public Member Functions inherited from protocols::jd2::JobInputter
static std::string	job_inputter_input_source_to_string (JobInputterInputSource::Enum source)
	call this with input_source() to get the input source of a particular job inputter More...

Protected Member Functions inherited from protocols::jd2::JobInputter
void	load_pose_into_job (core::pose::Pose const &pose, JobOP job)
	this function modifies the InnerJob's pose. Access to that pose is via friendship. More...

void	load_pose_into_job (core::pose::PoseCOP pose, JobOP job)
	this function modifies the InnerJob's pose. Access to that pose is via friendship. More...

virtual core::Size	get_nstruct () const
	this code is here to restrict the use of inner_job_nonconst (this class is a friend class and can do it) More...

Detailed Description

Definition at line 25 of file LazySilentFileJobInputter.hh.

Constructor & Destructor Documentation

protocols::jd2::LazySilentFileJobInputter::LazySilentFileJobInputter ( )

Definition at line 42 of file LazySilentFileJobInputter.cc.

References protocols::jd2::tr().

protocols::jd2::LazySilentFileJobInputter::~LazySilentFileJobInputter ( )

virtual

Definition at line 47 of file LazySilentFileJobInputter.cc.

Member Function Documentation

void protocols::jd2::LazySilentFileJobInputter::fill_jobs ( Jobs & jobs)

virtual

this function determines what jobs exist. This function neither knows nor cares what jobs are already complete on disk/memory - it just figures out what ones should exist given the input. NOTE: your JobInputter should order Job objects in the Jobs vector to have as few "transitions" between inputs as possible (group all Jobs of the same input next to each other). This improves efficiency of the "FAIL_BAD_INPUT" functionality. Note I said "should", not "must".

Implements protocols::jd2::JobInputter.

Definition at line 51 of file LazySilentFileJobInputter.cc.

References protocols::jd2::tr().

JobInputterInputSource::Enum protocols::jd2::LazySilentFileJobInputter::input_source ( ) const

virtual

return the type of input source that the JobInputter is currently using

Implements protocols::jd2::JobInputter.

Definition at line 141 of file LazySilentFileJobInputter.cc.

References protocols::jd2::JobInputterInputSource::SILENT_FILE.

void protocols::jd2::LazySilentFileJobInputter::pose_from_job	(	core::pose::Pose &	pose,
		JobOP	job
	)

virtual

this function is responsible for filling the pose reference with the pose indicated by the job. The Job object (within its InnerJob) contains a PoseCOP. This function needs to either fill the pose reference from the InnerJob or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference.

Implements protocols::jd2::JobInputter.

Definition at line 122 of file LazySilentFileJobInputter.cc.

References core::pose::Pose::clear(), core::pose::tag_into_pose(), and protocols::jd2::tr().

core::io::silent::SilentFileData const& protocols::jd2::LazySilentFileJobInputter::silent_file_data ( ) const

inline

Definition at line 41 of file LazySilentFileJobInputter.hh.

References sfd_.

core::io::silent::SilentStruct const & protocols::jd2::LazySilentFileJobInputter::struct_from_job ( JobOP job)

virtual

Definition at line 109 of file LazySilentFileJobInputter.cc.