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Rosetta 3.5
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Rosetta 3.5
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This is the complete list of members for core::scoring::FACTSPotential, including all inherited members.
| build_placeholders(pose::Pose const &pose, FACTSPoseInfo &facts_info) const | core::scoring::FACTSPotential | private |
| calculate_GBpair_apprx(Residue const &rsd1, Residue const &rsd2, FACTSResidueInfo &facts1, FACTSResidueInfo &facts2) const | core::scoring::FACTSPotential | private |
| calculate_GBpair_exact(Residue const &rsd1, Residue const &rsd2, FACTSResidueInfo &facts1, FACTSResidueInfo &facts2) const | core::scoring::FACTSPotential | private |
| cut_off_born_radius_ | core::scoring::FACTSPotential | private |
| do_apprx | core::scoring::FACTSPotential | private |
| dummy_distance_ | core::scoring::FACTSPotential | private |
| dummy_radius_ | core::scoring::FACTSPotential | private |
| dummy_scale_ | core::scoring::FACTSPotential | private |
| eval_atom_nonpolar_derivative(id::AtomID const &id, Real const weight, pose::Pose const &pose, kinematics::DomainMap const &domain_map, bool const exclude_DNA_DNA, Vector &F1, Vector &F2) const | core::scoring::FACTSPotential | |
| eval_atom_polar_derivative(id::AtomID const &id, Real const weight, pose::Pose const &pose, kinematics::DomainMap const &domain_map, bool const exclude_DNA_DNA, Vector &F1, Vector &F2) const | core::scoring::FACTSPotential | |
| evaluate_context_change_for_packing(Residue const &rsd1_ref, Residue const &rsd1, FACTSResidueInfo const &facts1, Residue const &rsd2_ref, Residue const &rsd2, FACTSResidueInfo const &facts2, utility::vector1< Real > &dBRi1, utility::vector1< Real > &dBRi2, utility::vector1< Real > &dSAi1, utility::vector1< Real > &dSAi2) const | core::scoring::FACTSPotential | |
| evaluate_nonpolar_energy(Residue const &rsd1, FACTSResidueInfo const &facts1, Residue const &rsd2) const | core::scoring::FACTSPotential | |
| evaluate_polar_energy(Residue const &rsd1, FACTSResidueInfo const &facts1, Residue const &rsd2) const | core::scoring::FACTSPotential | |
| evaluate_polar_otf_energy(Residue const &rsd1, FACTSResidueInfo const &facts1, Residue const &rsd2, FACTSResidueInfo const &facts2, utility::vector1< Real > const &dBRi1, utility::vector1< Real > const &dBRi2, bool do_correction) const | core::scoring::FACTSPotential | |
| extra_cut_off_interaction_ | core::scoring::FACTSPotential | private |
| extra_cut_off_self_ | core::scoring::FACTSPotential | private |
| FACTSPotential() | core::scoring::FACTSPotential | |
| GBPair_cut() const | core::scoring::FACTSPotential | inlineprivate |
| GBpair_cut_ | core::scoring::FACTSPotential | private |
| get_rotamers_born_radii(pose::Pose const &pose, conformation::RotamerSetBase &rotamer_set) const | core::scoring::FACTSPotential | |
| get_self_terms(FACTSResidueInfo &facts1) const | core::scoring::FACTSPotential | private |
| get_single_rotamer_born_radii(Residue const &rsd1, pose::Pose const &pose, FACTSPoseInfo const &gb_info, FACTSResidueInfo &gb1) const | core::scoring::FACTSPotential | |
| get_template_born_radii(pose::Pose const &pose, FACTSPoseInfo &gb_info) const | core::scoring::FACTSPotential | private |
| Kappa() const | core::scoring::FACTSPotential | inlineprivate |
| Kappa_ | core::scoring::FACTSPotential | private |
| MultiplicitiveFactor() const | core::scoring::FACTSPotential | inlineprivate |
| MultiplicitiveFactor_ | core::scoring::FACTSPotential | private |
| options_registered_ | core::scoring::FACTSPotential | private |
| polar_energy_pack_corrector(Residue const &ref_rsd, Residue const &rsd, FACTSResidueInfo const &facts_info) const | core::scoring::FACTSPotential | |
| res_res_burial(Residue const &rsd1, FACTSResidueInfo &gb1, Residue const &rsd2, FACTSResidueInfo const &gb2) const | core::scoring::FACTSPotential | private |
| res_res_burial_for_scoring(Residue const &rsd1, FACTSResidueInfo &gb1, Residue const &rsd2, FACTSResidueInfo &gb2) const | core::scoring::FACTSPotential | private |
| Residue typedef | core::scoring::FACTSPotential | |
| setup_for_derivatives(pose::Pose &pose) const | core::scoring::FACTSPotential | |
| setup_for_packing(pose::Pose &pose, utility::vector1< bool > const &repacking_residues) const | core::scoring::FACTSPotential | |
| setup_for_scoring(pose::Pose &pose) const | core::scoring::FACTSPotential | |
| Tau() const | core::scoring::FACTSPotential | inlineprivate |
| Tau_ | core::scoring::FACTSPotential | private |
| update_residue_for_packing(pose::Pose &pose, Size const seqpos) const | core::scoring::FACTSPotential |
1.8.4