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Rosetta 3.5
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#include <CentroidDisulfidePotential.hh>


Public Member Functions | |
| Cen_Distance_Func () | |
| virtual | ~Cen_Distance_Func () |
| constraints::FuncOP | clone () const |
| virtual core::Real | func (core::Real const ) const |
| Returns a value representing this function evaluated at a given point. More... | |
| virtual core::Real | dfunc (core::Real const ) const |
| Returns a value representing the derivative of this function evaluated at a given point. More... | |
Public Member Functions inherited from core::scoring::constraints::Func | |
| virtual | ~Func () |
| Automatically generated virtual destructor for class deriving directly from ReferenceCount. More... | |
| virtual void | read_data (std::istream &) |
| initialize this Func from the given std::istream. More... | |
| virtual Real | estimate_dfunc (Real const r) const |
| Estimates the derivative of this function at a given radius by calculating the slope of the secant line from func(r) and func(r+1e-05). More... | |
| virtual Real | estimate_dfunc (Real const r, Real const h) const |
| Estimates the derivative of this function at a given radius by calculating the slope of the secant line from func(r) and func(r+h). More... | |
| virtual void | show (std::ostream &out) const |
| Prints out space-delimited columns for r, func, dfunc and dfunc_est. The values for func, dfunc and dfunc_est are plotted as a function of r, which is varied from 2-20 in steps of 0.5. The value for dfunc_est is the estimated by the method estimate_dfunc( r ). More... | |
| virtual void | show_definition (std::ostream &out) const |
| shows the definition of this function, usually the string type of function and the parameters passed in to the constructor. More... | |
| virtual Size | show_violations (std::ostream &out, Real r, Size verbose_level, Real threshold=1) const |
| show some sort of stringified representation of the violations for this constraint. More... | |
Static Private Attributes | |
| static numeric::interpolation::HistogramCOP < core::Real, core::Real > ::Type | centroid_dist_scores_ = 0 |
Score based on the distance between the two residues' centroids
Definition at line 163 of file CentroidDisulfidePotential.hh.
| core::scoring::disulfides::Cen_Distance_Func::Cen_Distance_Func | ( | ) |
Definition at line 375 of file CentroidDisulfidePotential.cc.
Referenced by clone().
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virtual |
Definition at line 376 of file CentroidDisulfidePotential.cc.
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inlinevirtual |
Implements core::scoring::constraints::Func.
Definition at line 168 of file CentroidDisulfidePotential.hh.
References Cen_Distance_Func().
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virtual |
Returns a value representing the derivative of this function evaluated at a given point.
Implements core::scoring::constraints::Func.
Definition at line 384 of file CentroidDisulfidePotential.cc.
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virtual |
Returns a value representing this function evaluated at a given point.
Implements core::scoring::constraints::Func.
Definition at line 377 of file CentroidDisulfidePotential.cc.
References core::scoring::disulfides::histogram_from_db().
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staticprivate |
Definition at line 172 of file CentroidDisulfidePotential.hh.
1.8.4