protocols::sic_dock::XfoxmScore Struct Reference

#include <designability_score.hh>

Collaboration diagram for protocols::sic_dock::XfoxmScore:

Public Member Functions
	XfoxmScore (std::string datadir)
void	fillarray (char *a, std::string fname)
void	makebinary (char *a, std::string fname)
float	score (core::kinematics::Stub const &s1, core::kinematics::Stub const &s2, char ss1, char ss2) const
float	score (core::pose::Pose const &pose, platform::Size rsd1, platform::Size rsd2) const
float	score (core::pose::Pose &pose, bool compute_ss=true) const
float	score (core::pose::Pose const &pose) const

Public Attributes
char *	hh
char *	he
char *	hl
char *	ee
char *	el
char *	ll

Detailed Description

Definition at line 28 of file designability_score.hh.

Constructor & Destructor Documentation

protocols::sic_dock::XfoxmScore::XfoxmScore

(

std::string

datadir)

Definition at line 68 of file designability_score.cc.

References ee, el, fillarray(), he, hh, hl, and ll.

Member Function Documentation

void protocols::sic_dock::XfoxmScore::fillarray	(	char *	a,
		std::string	fname
	)

Definition at line 92 of file designability_score.cc.

Referenced by XfoxmScore().

void protocols::sic_dock::XfoxmScore::makebinary	(	char *	a,
		std::string	fname
	)

Definition at line 102 of file designability_score.cc.

float protocols::sic_dock::XfoxmScore::score	(	core::kinematics::Stub const &	s1,
		core::kinematics::Stub const &	s2,
		char	ss1,
		char	ss2
	)		const

Definition at line 128 of file designability_score.cc.

References ee, protocols::sic_dock::get_xform_stats(), core::kinematics::Stub::global2local(), he, hh, and core::kinematics::Stub::v.

Referenced by score().

float protocols::sic_dock::XfoxmScore::score	(	core::pose::Pose const &	pose,
		platform::Size	rsd1,
		platform::Size	rsd2
	)		const

Definition at line 165 of file designability_score.cc.

References core::conformation::Residue::has(), core::conformation::Residue::is_protein(), core::pose::Pose::residue(), score(), core::pose::Pose::secstruct(), and core::conformation::Residue::xyz().

float protocols::sic_dock::XfoxmScore::score	(	core::pose::Pose &	pose,
		bool	compute_ss = true
	)		const

Definition at line 187 of file designability_score.cc.

References core::scoring::dssp::Dssp::insert_ss_into_pose(), core::pose::Pose::n_residue(), and score().

float protocols::sic_dock::XfoxmScore::score

(

core::pose::Pose const &

pose)

const

Definition at line 209 of file designability_score.cc.

References core::pose::Pose::n_residue(), and score().

Member Data Documentation

char * protocols::sic_dock::XfoxmScore::ee

Definition at line 31 of file designability_score.hh.

Referenced by score(), and XfoxmScore().

char * protocols::sic_dock::XfoxmScore::el

Definition at line 31 of file designability_score.hh.

Referenced by XfoxmScore().

char * protocols::sic_dock::XfoxmScore::he

Definition at line 31 of file designability_score.hh.

Referenced by score(), and XfoxmScore().

char* protocols::sic_dock::XfoxmScore::hh

Definition at line 31 of file designability_score.hh.

Referenced by score(), and XfoxmScore().

char * protocols::sic_dock::XfoxmScore::hl

Definition at line 31 of file designability_score.hh.

Referenced by XfoxmScore().

char * protocols::sic_dock::XfoxmScore::ll

Definition at line 31 of file designability_score.hh.

Referenced by XfoxmScore().

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The documentation for this struct was generated from the following files:

• src/protocols/sic_dock/designability_score.hh
• src/protocols/sic_dock/designability_score.cc