protocols::frag_picker::scores::ConstScore Class Reference

ConstScore adds a constant to the total score for each position. More...

#include <ConstScore.hh>

Inheritance diagram for protocols::frag_picker::scores::ConstScore:

Collaboration diagram for protocols::frag_picker::scores::ConstScore:

Public Member Functions
	ConstScore (Size priority, Real lowest_acceptable_value, bool use_lowest)
virtual bool	score (FragmentCandidateOP f, FragmentScoreMapOP empty_map)
	Computes the score i.e. returns a constant times the number of residues in a fragment. More...
Public Member Functions inherited from protocols::frag_picker::scores::FragmentScoringMethod
	FragmentScoringMethod (Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name)
std::string &	get_score_name ()
	Returns a name of this scoring method. More...
Size	get_id ()
	Returns an integer index assigned to this scoring method by a scoring manager. More...
void	set_id (Size id)
	Sets a new integer index for this scoring method. More...
Size	get_priority ()
	Returns a priority of this scoring method. More...
Real	get_min_allowed_score ()
	Returns the lowest acceptable score value for this scoring method. More...
bool	get_use_lowest ()
	Returns the boolean choice on using the above lowest acceptable score value. More...
void	set_min_allowed_score (Real lowest_acceptable_value)
	Sets a new value of the lowest acceptable score. More...

Static Public Attributes
static const int	CONST_SCORE = 1
	the value used to score each position More...

Additional Inherited Members
Protected Attributes inherited from protocols::frag_picker::scores::FragmentScoringMethod
Size	id_
Size	priority_
std::string	name_
Real	lowest_acceptable_value_
bool	use_lowest_

Detailed Description

ConstScore adds a constant to the total score for each position.

Detailed: The total ConstScore for a fragment = n_frag_res * score_const

Definition at line 36 of file ConstScore.hh.

Constructor & Destructor Documentation

protocols::frag_picker::scores::ConstScore::ConstScore ( Size  priority, Real  lowest_acceptable_value, bool  use_lowest  )

inline

Definition at line 43 of file ConstScore.hh.

Member Function Documentation

virtual bool protocols::frag_picker::scores::ConstScore::score ( FragmentCandidateOP  f, FragmentScoreMapOP  empty_map  )

inlinevirtual

Computes the score i.e. returns a constant times the number of residues in a fragment.

Detailed: the method returns ALWAYS TRUE which is inconsistent with other methods derived from

FragmentScoringMethod base class. The other option (i.e. returning false when a score is too high) doesn't make any sense in this case.

Implements protocols::frag_picker::scores::FragmentScoringMethod.

Definition at line 51 of file ConstScore.hh.

References CONST_SCORE, and protocols::frag_picker::scores::FragmentScoringMethod::id_.

Member Data Documentation

const int protocols::frag_picker::scores::ConstScore::CONST_SCORE = 1

static

the value used to score each position

Detailed: You don't have to change the value

here as you can always rescale the score by a weight provided in a score configuration file

Definition at line 41 of file ConstScore.hh.

Referenced by score().

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The documentation for this class was generated from the following file:

• src/protocols/frag_picker/scores/ConstScore.hh