core::pack::task::operation::ExtraRotamersGeneric Class Reference

#include <TaskOperations.hh>

Inheritance diagram for core::pack::task::operation::ExtraRotamersGeneric:

Collaboration diagram for core::pack::task::operation::ExtraRotamersGeneric:

Public Types
typedef TaskOperation	parent
Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagPtr	TagPtr
typedef pose::Pose	Pose

Public Member Functions
	ExtraRotamersGeneric ()
	BEGIN ExtraRotamersGeneric. More...
virtual	~ExtraRotamersGeneric ()
virtual TaskOperationOP	clone () const
	Create another task operation of the type matching the most-derived version of the class. More...
virtual void	parse_tag (TagPtr)
	Used to parse an xml-like tag to load parameters and properties. More...
virtual void	apply (pose::Pose const &, PackerTask &) const
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
Public Member Functions inherited from core::pack::task::operation::TaskOperation
virtual	~TaskOperation ()
virtual void	parse_def (utility::lua::LuaObject const &def)

Private Attributes
bool	ex1_
bool	ex2_
bool	ex3_
bool	ex4_
bool	ex1aro_
bool	ex2aro_
bool	ex1aro_exposed_
bool	ex2aro_exposed_
ExtraRotSample	ex1_sample_level_
ExtraRotSample	ex2_sample_level_
ExtraRotSample	ex3_sample_level_
ExtraRotSample	ex4_sample_level_
ExtraRotSample	ex1aro_sample_level_
ExtraRotSample	ex2aro_sample_level_
ExtraRotSample	ex1aro_exposed_sample_level_
ExtraRotSample	ex2aro_exposed_sample_level_
ExtraRotSample	exdna_sample_level_
Size	extrachi_cutoff_

Detailed Description

control the extra chi rotamers for all residues

Definition at line 230 of file TaskOperations.hh.

Member Typedef Documentation

typedef TaskOperation core::pack::task::operation::ExtraRotamersGeneric::parent

Definition at line 232 of file TaskOperations.hh.

Constructor & Destructor Documentation

core::pack::task::operation::ExtraRotamersGeneric::ExtraRotamersGeneric

(

)

BEGIN ExtraRotamersGeneric.

Definition at line 447 of file TaskOperations.cc.

Referenced by clone().

core::pack::task::operation::ExtraRotamersGeneric::~ExtraRotamersGeneric ( )

virtual

Definition at line 468 of file TaskOperations.cc.

Member Function Documentation

void core::pack::task::operation::ExtraRotamersGeneric::apply ( pose::Pose const &  , PackerTask &    ) const

virtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

Definition at line 507 of file TaskOperations.cc.

References ex1_, ex1_sample_level_, ex1aro_, ex1aro_exposed_, ex1aro_exposed_sample_level_, ex1aro_sample_level_, ex2_, ex2_sample_level_, ex2aro_, ex2aro_exposed_, ex2aro_exposed_sample_level_, ex2aro_sample_level_, ex3_, ex3_sample_level_, ex4_, ex4_sample_level_, exdna_sample_level_, extrachi_cutoff_, core::pack::task::PackerTask::nonconst_residue_task(), core::pack::task::ResidueLevelTask::or_ex1(), and core::pack::task::PackerTask::total_residue().

TaskOperationOP core::pack::task::operation::ExtraRotamersGeneric::clone ( ) const

virtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

Definition at line 475 of file TaskOperations.cc.

References ExtraRotamersGeneric().

void core::pack::task::operation::ExtraRotamersGeneric::parse_tag ( TagPtr  tag)

virtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

Definition at line 481 of file TaskOperations.cc.

References ex1_, ex1_sample_level_, ex1aro_, ex1aro_exposed_, ex1aro_exposed_sample_level_, ex1aro_sample_level_, ex2_, ex2_sample_level_, ex2aro_, ex2aro_exposed_, ex2aro_exposed_sample_level_, ex2aro_sample_level_, ex3_, ex3_sample_level_, ex4_, ex4_sample_level_, exdna_sample_level_, extrachi_cutoff_, core::pack::task::EXTRACHI_CUTOFF_LIMIT, and core::pack::task::NO_EXTRA_CHI_SAMPLES.

Member Data Documentation

bool core::pack::task::operation::ExtraRotamersGeneric::ex1_

private

Definition at line 248 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex1_sample_level_

private

Definition at line 257 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex1aro_

private

Definition at line 252 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex1aro_exposed_

private

Definition at line 254 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex1aro_exposed_sample_level_

private

Definition at line 263 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex1aro_sample_level_

private

Definition at line 261 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex2_

private

Definition at line 249 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex2_sample_level_

private

Definition at line 258 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex2aro_

private

Definition at line 253 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex2aro_exposed_

private

Definition at line 255 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex2aro_exposed_sample_level_

private

Definition at line 264 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex2aro_sample_level_

private

Definition at line 262 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex3_

private

Definition at line 250 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex3_sample_level_

private

Definition at line 259 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

bool core::pack::task::operation::ExtraRotamersGeneric::ex4_

private

Definition at line 251 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::ex4_sample_level_

private

Definition at line 260 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

ExtraRotSample core::pack::task::operation::ExtraRotamersGeneric::exdna_sample_level_

private

Definition at line 265 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

Size core::pack::task::operation::ExtraRotamersGeneric::extrachi_cutoff_

private

Definition at line 266 of file TaskOperations.hh.

Referenced by apply(), and parse_tag().

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The documentation for this class was generated from the following files:

• src/core/pack/task/operation/TaskOperations.hh
• src/core/pack/task/operation/TaskOperations.cc