MembraneTopologyClaimer.hh

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// -*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
// vi: set ts=2 noet:
//
// This file is part of the Rosetta software suite and is made available under license.
// The Rosetta software is developed by the contributing members of the Rosetta Commons consortium.
// (C) 199x-2009 Rosetta Commons participating institutions and developers.
// For more information, see http://www.rosettacommons.org/.

/// @file MembraneTopologyClaimer
/// @brief membrane topology
/// @author Yifan Song


#ifndef INCLUDED_protocols_topology_broker_MembraneTopologyClaimer_hh
#define INCLUDED_protocols_topology_broker_MembraneTopologyClaimer_hh


// Unit Headers
// AUTO-REMOVED #include <protocols/topology_broker/FoldandDockClaimer.fwd.hh>

// Package Headers
#include <protocols/topology_broker/DofClaim.fwd.hh>
#include <protocols/topology_broker/TopologyClaimer.hh>

// Project Headers
#include <core/pose/Pose.hh>

#include <utility/pointer/ReferenceCount.hh>

#include <utility/vector1.hh>

// option key includes


namespace protocols {
  namespace topology_broker {

    class MembraneTopologyClaimer : public TopologyClaimer {
      typedef TopologyClaimer Parent;

    public:

      //c'stor
      MembraneTopologyClaimer();
      MembraneTopologyClaimer( core::pose::Pose const& input_pose );

      //clone
      virtual TopologyClaimerOP clone() const {
        return new MembraneTopologyClaimer( *this );
      }

      ///@brief type() is specifying the output name of the TopologyClaimer
      virtual std::string type() const {
        return _static_type_name();
      }

      static std::string _static_type_name() {
        return "MembraneTopologyClaimer";
      }

      virtual void add_mover(
                   moves::RandomMover& random_mover,
                   core::pose::Pose const& pose,
                   abinitio::StageID stageID,
                   core::scoring::ScoreFunction const& scorefxn,
                   core::Real progress
                   );

      virtual void initialize_dofs( core::pose::Pose&,
                     DofClaims const& init_claims,
                     DofClaims& /*failed_to_init*/ );

      void addVirtualResAsRootMembrane( core::pose::Pose & pose );

    private:

      ///@brief starting pose
      core::pose::Pose input_pose_;

    };

  }
}

#endif