protocols::loops::loop_mover Namespace Reference

Namespaces
	perturb
	refine

Classes
class	IndependentLoopMover
class	LoopMover
	The loop-rebuild protocol. More...

Typedefs
typedef utility::pointer::owning_ptr < IndependentLoopMover >	IndependentLoopMoverOP
typedef utility::pointer::owning_ptr < IndependentLoopMover const >	IndependentLoopMoverCOP
typedef utility::pointer::owning_ptr < LoopMover >	LoopMoverOP
typedef utility::pointer::owning_ptr < LoopMover const >	LoopMoverCOP
typedef utility::pointer::access_ptr < LoopMover >	LoopMoverAP
typedef utility::pointer::access_ptr < LoopMover const >	LoopMoverCAP
typedef utility::pointer::owning_ptr < MultiLoopMover >	MultiLoopMoverOP
typedef utility::pointer::owning_ptr < MultiLoopMover const >	MultiLoopMoverCOP
typedef utility::pointer::owning_ptr < SingleLoopMover >	SingleLoopMoverOP
typedef utility::pointer::owning_ptr < SingleLoopMover const >	SingleLoopMoverCOP

Enumerations
enum	LoopResult { Success, CriticalFailure, Failure, ExtendFailure }

Functions
static numeric::random::RandomGenerator	RG (47537)
void	loops_set_chainbreak_weight (core::scoring::ScoreFunctionOP scorefxn, Size const round)

Typedef Documentation

typedef utility::pointer::owning_ptr< IndependentLoopMover const > protocols::loops::loop_mover::IndependentLoopMoverCOP

Definition at line 27 of file IndependentLoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< IndependentLoopMover > protocols::loops::loop_mover::IndependentLoopMoverOP

Definition at line 24 of file IndependentLoopMover.fwd.hh.

typedef utility::pointer::access_ptr< LoopMover > protocols::loops::loop_mover::LoopMoverAP

Definition at line 31 of file LoopMover.fwd.hh.

typedef utility::pointer::access_ptr< LoopMover const > protocols::loops::loop_mover::LoopMoverCAP

Definition at line 32 of file LoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< LoopMover const > protocols::loops::loop_mover::LoopMoverCOP

Definition at line 29 of file LoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< LoopMover > protocols::loops::loop_mover::LoopMoverOP

Definition at line 26 of file LoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< MultiLoopMover const > protocols::loops::loop_mover::MultiLoopMoverCOP

Definition at line 37 of file LoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< MultiLoopMover > protocols::loops::loop_mover::MultiLoopMoverOP

Definition at line 34 of file LoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< SingleLoopMover const > protocols::loops::loop_mover::SingleLoopMoverCOP

Definition at line 42 of file LoopMover.fwd.hh.

typedef utility::pointer::owning_ptr< SingleLoopMover > protocols::loops::loop_mover::SingleLoopMoverOP

Definition at line 39 of file LoopMover.fwd.hh.

Enumeration Type Documentation

enum protocols::loops::loop_mover::LoopResult

Enumerator
Success
CriticalFailure
Failure
ExtendFailure

Definition at line 47 of file LoopMover.hh.

Function Documentation

void protocols::loops::loop_mover::loops_set_chainbreak_weight	(	core::scoring::ScoreFunctionOP	scorefxn,
		Size const	round
	)

Definition at line 289 of file LoopMover.cc.

References core::scoring::chainbreak, and core::scoring::linear_chainbreak.

Referenced by protocols::loops::loop_mover::refine::LoopMover_Refine_KIC::apply(), protocols::loops::loop_mover::perturb::LoopMover_Perturb_KIC::LoopMover_Perturb_KIC(), protocols::comparative_modeling::LoopRelaxMover::parse_my_tag(), and protocols::comparative_modeling::LoopRelaxMover::set_defaults_().

static numeric::random::RandomGenerator protocols::loops::loop_mover::RG ( 47537  )

static

Referenced by protocols::loops::loop_mover::IndependentLoopMover::select_loops().