protocols::frag_picker::DiversifyCrmsdSelector Class Reference

selects fragments by running several selectors More...

#include <DiversifyCrmsdSelector.hh>

Inheritance diagram for protocols::frag_picker::DiversifyCrmsdSelector:

Collaboration diagram for protocols::frag_picker::DiversifyCrmsdSelector:

Public Member Functions
	DiversifyCrmsdSelector (Size frags_per_pos, Real cutoff)
	Constructor sets the desired number of fragments and crmsd cutoff. More...
virtual void	select_fragments (ScoredCandidatesVector1 const &, ScoredCandidatesVector1 &)
	Selects desired number of fragments from a given set of candidates. More...
virtual	~DiversifyCrmsdSelector ()
Public Member Functions inherited from protocols::frag_picker::FragmentSelectingRule
	FragmentSelectingRule (Size frags_per_pos)
	Constructor sets the desired number of fragments. More...
Size	frags_per_pos ()
	Says how many fragments will be selected for each position in a query sequence. More...
virtual	~FragmentSelectingRule ()

Private Member Functions
void	copy_coordinates (FragmentCandidateOP src, FArray2D_double &dst)

Private Attributes
Real	cutoff_
FArray2D_double	fi_
FArray2D_double	fj_
FArray1D_double	weights_

Detailed Description

selects fragments by running several selectors

Definition at line 42 of file DiversifyCrmsdSelector.hh.

Constructor & Destructor Documentation

protocols::frag_picker::DiversifyCrmsdSelector::DiversifyCrmsdSelector ( Size  frags_per_pos, Real  cutoff  )

inline

Constructor sets the desired number of fragments and crmsd cutoff.

Definition at line 46 of file DiversifyCrmsdSelector.hh.

virtual protocols::frag_picker::DiversifyCrmsdSelector::~DiversifyCrmsdSelector ( )

inlinevirtual

Definition at line 53 of file DiversifyCrmsdSelector.hh.

Member Function Documentation

void protocols::frag_picker::DiversifyCrmsdSelector::copy_coordinates ( FragmentCandidateOP  src, FArray2D_double &  dst  )

private

Definition at line 36 of file DiversifyCrmsdSelector.cc.

References protocols::kinmatch::xyz().

void protocols::frag_picker::DiversifyCrmsdSelector::select_fragments ( ScoredCandidatesVector1 const &  in, ScoredCandidatesVector1 &  out  )

virtual

Selects desired number of fragments from a given set of candidates.

Implements protocols::frag_picker::FragmentSelectingRule.

Definition at line 53 of file DiversifyCrmsdSelector.cc.

References core::scoring::rms, and protocols::frag_picker::trDiversifyCrmsdSelector().

Member Data Documentation

Real protocols::frag_picker::DiversifyCrmsdSelector::cutoff_

private

Definition at line 57 of file DiversifyCrmsdSelector.hh.

FArray2D_double protocols::frag_picker::DiversifyCrmsdSelector::fi_

private

Definition at line 58 of file DiversifyCrmsdSelector.hh.

FArray2D_double protocols::frag_picker::DiversifyCrmsdSelector::fj_

private

Definition at line 59 of file DiversifyCrmsdSelector.hh.

FArray1D_double protocols::frag_picker::DiversifyCrmsdSelector::weights_

private

Definition at line 60 of file DiversifyCrmsdSelector.hh.

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The documentation for this class was generated from the following files:

• src/protocols/frag_picker/DiversifyCrmsdSelector.hh
• src/protocols/frag_picker/DiversifyCrmsdSelector.cc