protocols::simple_filters::RmsdEvaluator Class Reference

#include <RmsdEvaluator.hh>

Inheritance diagram for protocols::simple_filters::RmsdEvaluator:

Collaboration diagram for protocols::simple_filters::RmsdEvaluator:

Public Member Functions
	RmsdEvaluator (core::pose::PoseCOP, core::Size start, core::Size end, std::string tag="", bool bGDT=true)
	RmsdEvaluator (core::pose::PoseCOP, std::string tag="", bool bGDT=true)
	~RmsdEvaluator ()
virtual void	apply (core::pose::Pose &pose, std::string tag, core::io::silent::SilentStruct &pss) const
	evaluate pose and store values in Silent_Struct why is this specific to a specific type of SilentStruct? that seems needlessly pointless and overly constraining. More...
virtual core::Real	apply (core::pose::Pose &) const
	evaluate pose More...
void	report_gdt_components (bool const setting)
Public Member Functions inherited from protocols::evaluation::SingleValuePoseEvaluator< core::Real >
	SingleValuePoseEvaluator (std::string name)
virtual bool	applicable (core::pose::Pose const &) const
virtual core::Size	size () const
virtual std::string	name (core::Size) const
Public Member Functions inherited from protocols::evaluation::PoseEvaluator
	PoseEvaluator ()
virtual	~PoseEvaluator ()
virtual void	apply (core::io::silent::SilentStruct &pss) const
	direct application to SilentStruct... default implementation makes pose and calls "apply", you can overload if you don't need the pose-step More...

Private Attributes
core::pose::PoseCOP	rmsd_pose_
core::Size	start_
core::Size	end_
bool	bGDT_
std::string	tag_
bool	report_gdt_components_

Detailed Description

Definition at line 53 of file RmsdEvaluator.hh.

Constructor & Destructor Documentation

protocols::simple_filters::RmsdEvaluator::RmsdEvaluator	(	core::pose::PoseCOP	pose,
		core::Size	start,
		core::Size	end,
		std::string	tag = "",
		bool	bGDT = true
	)

Definition at line 52 of file RmsdEvaluator.cc.

protocols::simple_filters::RmsdEvaluator::RmsdEvaluator	(	core::pose::PoseCOP	pose,
		std::string	tag = "",
		bool	bGDT = true
	)

Definition at line 67 of file RmsdEvaluator.cc.

protocols::simple_filters::RmsdEvaluator::~RmsdEvaluator

(

)

Definition at line 65 of file RmsdEvaluator.cc.

Member Function Documentation

void protocols::simple_filters::RmsdEvaluator::apply ( core::pose::Pose &  , std::string  tag, core::io::silent::SilentStruct &  pss  ) const

virtual

evaluate pose and store values in Silent_Struct why is this specific to a specific type of SilentStruct? that seems needlessly pointless and overly constraining.

Reimplemented from protocols::evaluation::SingleValuePoseEvaluator< core::Real >.

Definition at line 79 of file RmsdEvaluator.cc.

References core::io::silent::SilentStruct::add_energy(), bGDT_, core::scoring::CA_gdtmm(), core::scoring::CA_maxsub(), end_, report_gdt_components_, rmsd_pose_, start_, tag_, and protocols::simple_filters::tr().

Real protocols::simple_filters::RmsdEvaluator::apply ( core::pose::Pose &  pose) const

virtual

evaluate pose

Implements protocols::evaluation::SingleValuePoseEvaluator< core::Real >.

Definition at line 105 of file RmsdEvaluator.cc.

References core::scoring::CA_rmsd(), end_, rmsd_pose_, start_, and core::pose::Pose::total_residue().

void protocols::simple_filters::RmsdEvaluator::report_gdt_components ( bool const  setting)

inline

Definition at line 64 of file RmsdEvaluator.hh.

References report_gdt_components_.

Member Data Documentation

bool protocols::simple_filters::RmsdEvaluator::bGDT_

private

Definition at line 70 of file RmsdEvaluator.hh.

Referenced by apply().

core::Size protocols::simple_filters::RmsdEvaluator::end_

private

Definition at line 69 of file RmsdEvaluator.hh.

Referenced by apply().

bool protocols::simple_filters::RmsdEvaluator::report_gdt_components_

private

Definition at line 72 of file RmsdEvaluator.hh.

Referenced by apply(), and report_gdt_components().

core::pose::PoseCOP protocols::simple_filters::RmsdEvaluator::rmsd_pose_

private

Definition at line 67 of file RmsdEvaluator.hh.

Referenced by apply().

core::Size protocols::simple_filters::RmsdEvaluator::start_

private

Definition at line 68 of file RmsdEvaluator.hh.

Referenced by apply().

std::string protocols::simple_filters::RmsdEvaluator::tag_

private

Definition at line 71 of file RmsdEvaluator.hh.

Referenced by apply().

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The documentation for this class was generated from the following files:

• src/protocols/simple_filters/RmsdEvaluator.hh
• src/protocols/simple_filters/RmsdEvaluator.cc