protocols::simple_filters::LoopRmsdEvaluator Class Reference

#include <RmsdEvaluator.hh>

Inheritance diagram for protocols::simple_filters::LoopRmsdEvaluator:

Collaboration diagram for protocols::simple_filters::LoopRmsdEvaluator:

Public Member Functions
	LoopRmsdEvaluator (core::pose::PoseCOP, protocols::loops::Loops, std::string tag, bool CA_only, bool superimpose)
	LoopRmsdEvaluator (core::pose::PoseCOP, protocols::loops::Loops, protocols::loops::Loops core, std::string tag, bool CA_only, bool superimpose)
virtual core::Real	apply (core::pose::Pose &) const
	evaluate pose More...
Public Member Functions inherited from protocols::evaluation::SingleValuePoseEvaluator< core::Real >
	SingleValuePoseEvaluator (std::string name)
virtual void	apply (core::pose::Pose &, std::string tag, core::io::silent::SilentStruct &pss) const
	evaluate pose and store values in Silent_Struct why is this specific to a specific type of SilentStruct? that seems needlessly pointless and overly constraining. More...
virtual bool	applicable (core::pose::Pose const &) const
virtual core::Size	size () const
virtual std::string	name (core::Size) const
Public Member Functions inherited from protocols::evaluation::PoseEvaluator
	PoseEvaluator ()
virtual	~PoseEvaluator ()
virtual void	apply (core::io::silent::SilentStruct &pss) const
	direct application to SilentStruct... default implementation makes pose and calls "apply", you can overload if you don't need the pose-step More...

Private Attributes
core::pose::PoseCOP	rmsd_pose_
protocols::loops::Loops	loops_
protocols::loops::Loops	core_
bool	CAonly_
bool	superimpose_

Detailed Description

Definition at line 148 of file RmsdEvaluator.hh.

Constructor & Destructor Documentation

protocols::simple_filters::LoopRmsdEvaluator::LoopRmsdEvaluator	(	core::pose::PoseCOP	pose,
		protocols::loops::Loops	loops,
		std::string	tag,
		bool	CA_only,
		bool	superimpose
	)

Definition at line 294 of file RmsdEvaluator.cc.

protocols::simple_filters::LoopRmsdEvaluator::LoopRmsdEvaluator	(	core::pose::PoseCOP	pose,
		protocols::loops::Loops	loops,
		protocols::loops::Loops	core,
		std::string	tag,
		bool	CA_only,
		bool	superimpose
	)

Definition at line 302 of file RmsdEvaluator.cc.

Member Function Documentation

Real protocols::simple_filters::LoopRmsdEvaluator::apply ( core::pose::Pose &  ) const

virtual

evaluate pose

Implements protocols::evaluation::SingleValuePoseEvaluator< core::Real >.

Definition at line 313 of file RmsdEvaluator.cc.

References CAonly_, core_, protocols::jd2::get_current_jobs_starting_pose(), protocols::jd2::jd2_used(), protocols::loops::loop_rmsd(), protocols::loops::loop_rmsd_with_superimpose_core(), loops_, protocols::evaluation::SingleValuePoseEvaluator< core::Real >::name(), rmsd_pose_, and superimpose_.

Member Data Documentation

bool protocols::simple_filters::LoopRmsdEvaluator::CAonly_

private

Definition at line 158 of file RmsdEvaluator.hh.

Referenced by apply().

protocols::loops::Loops protocols::simple_filters::LoopRmsdEvaluator::core_

private

Definition at line 157 of file RmsdEvaluator.hh.

Referenced by apply().

protocols::loops::Loops protocols::simple_filters::LoopRmsdEvaluator::loops_

private

Definition at line 156 of file RmsdEvaluator.hh.

Referenced by apply().

core::pose::PoseCOP protocols::simple_filters::LoopRmsdEvaluator::rmsd_pose_

private

Definition at line 155 of file RmsdEvaluator.hh.

Referenced by apply().

bool protocols::simple_filters::LoopRmsdEvaluator::superimpose_

private

Definition at line 159 of file RmsdEvaluator.hh.

Referenced by apply().

---

The documentation for this class was generated from the following files:

• src/protocols/simple_filters/RmsdEvaluator.hh
• src/protocols/simple_filters/RmsdEvaluator.cc