A protocols::moves::Mover that packs the side-chains using a rotamer library It uses a ScoreFunction for packing and a PackerTask, or a TaskFactory that generates a PackerTask, for instructions on what rotamer sets are allowed at each residue position during packing. More...

#include <PackRotamersMover.hh>

Inheritance diagram for protocols::simple_moves::PackRotamersMover:

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Collaboration diagram for protocols::simple_moves::PackRotamersMover:

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Public Types
typedef core::pack::interaction_graph::InteractionGraphBaseOP	InteractionGraphBaseOP
	please derive from PackRotamersMover instead of attempting to add protocol-specific stuff here! More...

typedef core::pack::interaction_graph::InteractionGraphBaseCOP	InteractionGraphBaseCOP

typedef core::pack::rotamer_set::RotamerSetsOP	RotamerSetsOP

typedef core::pack::rotamer_set::RotamerSetsCOP	RotamerSetsCOP

typedef core::pack::task::PackerTaskCOP	PackerTaskCOP

typedef core::pack::task::TaskFactoryCOP	TaskFactoryCOP

typedef core::scoring::ScoreFunctionCOP	ScoreFunctionCOP

Public Types inherited from protocols::moves::Mover
typedef utility::tag::TagPtr	TagPtr

typedef core::pose::Pose	Pose

typedef core::pose::PoseCOP	PoseCOP

typedef protocols::filters::Filters_map	Filters_map

typedef std::list< std::string >	Strings

Public Member Functions
	PackRotamersMover ()
	default constructor More...

	PackRotamersMover (std::string const &)
	constructor with typename More...

	PackRotamersMover (ScoreFunctionCOP scorefxn, PackerTaskCOP task=0, core::Size nloop=1)
	Constructs a PackRotamersMover with PackerTask <task> evaluated using <scorefxn> More...

virtual	~PackRotamersMover ()

	PackRotamersMover (PackRotamersMover const &other)

virtual void	apply (Pose &pose)
	Performs side-chain packing based on the input PackerTask using the input ScoreFunction. More...

virtual std::string	get_name () const
	Each derived class must specify its name. The class name. More...

bool	task_is_valid (Pose const &pose) const
	when the PackerTask was not generated locally, verify compatibility with pose More...

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, protocols::moves::MoverCacheSP cache)

virtual void	parse_my_tag (TagPtr const, protocols::moves::DataMap &, Filters_map const &, protocols::moves::Movers_map const &, Pose const &)
	allow non-const access to the internal minimizer options object More...

virtual void	parse_score_function (TagPtr const, protocols::moves::DataMap const &, Filters_map const &, protocols::moves::Movers_map const &, Pose const &)
	parse "scorefxn" XML option (can be employed virtually by derived Packing movers) More...

virtual void	parse_task_operations (TagPtr const, protocols::moves::DataMap const &, Filters_map const &, protocols::moves::Movers_map const &, Pose const &)
	parse "task_operations" XML option (can be employed virtually by derived Packing movers) More...

virtual protocols::moves::MoverOP	fresh_instance () const
	required in the context of the parser/scripting scheme More...

virtual protocols::moves::MoverOP	clone () const
	required in the context of the parser/scripting scheme More...

void	score_function (ScoreFunctionCOP sf)
	Sets the ScoreFunction to <sf> More...

void	task_factory (TaskFactoryCOP tf)
	Sets the TaskFactory to <tf> More...

void	task (PackerTaskCOP t)
	Sets the PackerTask to <t> More...

void	nloop (core::Size nloop_in)

ScoreFunctionCOP	score_function () const
	Returns the ScoreFunction. More...

PackerTaskCOP	task () const
	Returns the PackerTask. More...

core::Size	nloop () const

TaskFactoryCOP	task_factory () const
	Returns the TaskFactory. More...

RotamerSetsCOP	rotamer_sets () const

InteractionGraphBaseCOP	ig () const

Public Member Functions inherited from protocols::moves::Mover
	Mover ()

virtual	~Mover ()

virtual MoverSP	create ()

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	parse_state (SerializableState const &state)

virtual void	save_state (SerializableState &state)

	Mover (std::string const &type_name)
	sets the type for a mover; name_ has been removed (2010/05/14) More...

	Mover (Mover const &other)

Mover &	operator= (Mover const &other)
	assignment operator More...

virtual core::Real	last_proposal_density_ratio ()

std::string const &	type () const

std::string	get_current_tag () const
	A tag is a unique identifier used to identify structures produced by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) sets the tag. This functionality is not intended for use with the 2008 job distributor. More...

void	set_current_tag (std::string const &new_tag)

virtual void	set_input_pose (PoseCOP pose)
	setter for poses contained for rms More...

virtual void	set_native_pose (PoseCOP pose)
	setter for native poses contained for rms -— we should get rid of this method? it is widely used, but a bit unsafe More...

PoseCOP	get_input_pose () const

PoseCOP	get_native_pose () const

virtual void	test_move (Pose &pose)
	: Unit test support function. Apply one move to a given pose. Allows extra test specific functions to be called before applying More...

void	type (const std::string &type_in)

std::string	get_type () const

MoverStatus	get_last_move_status () const
	end parser interface, start Job Distributor interface///////////// More...

void	reset_status ()
	resets status to SUCCESS, meant to be used before an apply(). The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s. More...

virtual core::pose::PoseOP	get_additional_output ()
	Mechanism by which a mover may return multiple output poses from a single input pose. More...

virtual void	clear_info ()
	Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file. More...

virtual Strings &	info ()
	non-const accessor More...

virtual Strings const &	info () const
	const accessor More...

virtual bool	reinitialize_for_each_job () const
	this function informs the job distributor (august 08 vintage) whether this object needs to be freshly regenerated on each use. More...

virtual bool	reinitialize_for_new_input () const
	this function informs the job distributor (august 08 vintage) whether this object needs to be regenerated when the input pose is about to change (for example, if the mover has special code on the first apply() that is only valid for that one input pose). More...

void	set_current_job (protocols::jobdist::BasicJobCOP job)

jobdist::BasicJobCOP	get_current_job () const

Protected Member Functions
virtual void	setup (Pose &pose)
	get rotamers, energies. Also performs lazy initialization of ScoreFunction, PackerTask. More...

virtual core::PackerEnergy	run (Pose &pose, utility::vector0< int > rot_to_pack=utility::vector0< int >()) const

virtual void	note_packertask_settings (Pose const &)
	note PackerTask's packable and designable residues as string info More...

Protected Member Functions inherited from protocols::moves::Mover
void	set_last_move_status (MoverStatus status)
	nonvirtual setter for MoverStatus last_status_. Protected means that only the mover itself will be able to change its own status. The job distributor (august 08 vintage) is aware of status set with this function and will do what the MoverStatus says. More...

Private Attributes
ScoreFunctionCOP	scorefxn_

PackerTaskCOP	task_

core::Size	nloop_

TaskFactoryCOP	task_factory_

RotamerSetsOP	rotamer_sets_

InteractionGraphBaseOP	ig_

Friends
std::ostream &	operator<< (std::ostream &os, PackRotamersMover const &mover)

Additional Inherited Members
Static Public Member Functions inherited from protocols::moves::Mover
static std::string	name ()

static void	register_options ()
	overload this static method if you access options within the mover. these options will end up in -help of your application if users of this mover call register_options. do this recursively! if you use movers within your mover, call their register_options in your register_options() method. More...

Detailed Description

A protocols::moves::Mover that packs the side-chains using a rotamer library It uses a ScoreFunction for packing and a PackerTask, or a TaskFactory that generates a PackerTask, for instructions on what rotamer sets are allowed at each residue position during packing.

Common Methods: PackRotamersMover.apply

Definition at line 55 of file PackRotamersMover.hh.

Member Typedef Documentation

typedef core::pack::interaction_graph::InteractionGraphBaseCOP protocols::simple_moves::PackRotamersMover::InteractionGraphBaseCOP

Definition at line 60 of file PackRotamersMover.hh.

typedef core::pack::interaction_graph::InteractionGraphBaseOP protocols::simple_moves::PackRotamersMover::InteractionGraphBaseOP

please derive from PackRotamersMover instead of attempting to add protocol-specific stuff here!

Author: ashworth (current form)

Definition at line 59 of file PackRotamersMover.hh.

typedef core::pack::task::PackerTaskCOP protocols::simple_moves::PackRotamersMover::PackerTaskCOP

Definition at line 63 of file PackRotamersMover.hh.

typedef core::pack::rotamer_set::RotamerSetsCOP protocols::simple_moves::PackRotamersMover::RotamerSetsCOP

Definition at line 62 of file PackRotamersMover.hh.

typedef core::pack::rotamer_set::RotamerSetsOP protocols::simple_moves::PackRotamersMover::RotamerSetsOP

Definition at line 61 of file PackRotamersMover.hh.

typedef core::scoring::ScoreFunctionCOP protocols::simple_moves::PackRotamersMover::ScoreFunctionCOP

Definition at line 65 of file PackRotamersMover.hh.

typedef core::pack::task::TaskFactoryCOP protocols::simple_moves::PackRotamersMover::TaskFactoryCOP

Definition at line 64 of file PackRotamersMover.hh.

Constructor & Destructor Documentation

protocols::simple_moves::PackRotamersMover::PackRotamersMover ( )

default constructor

Definition at line 82 of file PackRotamersMover.cc.

Referenced by fresh_instance().

protocols::simple_moves::PackRotamersMover::PackRotamersMover ( std::string const & type_name)

constructor with typename

Definition at line 92 of file PackRotamersMover.cc.

protocols::simple_moves::PackRotamersMover::PackRotamersMover	(	ScoreFunctionCOP	scorefxn,
		PackerTaskCOP	task = `0`,
		core::Size	nloop = `1`
	)

Constructs a PackRotamersMover with PackerTask <task> evaluated using <scorefxn>

ScoreFunction scorefxn /function to minimize while changine rotamers PackerTask task /object specifying what to design/pack Size (int) nloop /number of loops in the Pose (???)

Definition at line 103 of file PackRotamersMover.cc.

protocols::simple_moves::PackRotamersMover::~PackRotamersMover ( )

virtual

Definition at line 117 of file PackRotamersMover.cc.

protocols::simple_moves::PackRotamersMover::PackRotamersMover ( PackRotamersMover const & other)

Definition at line 119 of file PackRotamersMover.cc.

References ig_, nloop(), nloop_, rotamer_sets_, score_function(), scorefxn_, task(), task_, task_factory(), and task_factory_.

Member Function Documentation

void protocols::simple_moves::PackRotamersMover::apply ( Pose & pose)

virtual

Performs side-chain packing based on the input PackerTask using the input ScoreFunction.

example(s): packmover.apply(pose) See Also: PackerTask ScoreFunction

Implements protocols::moves::Mover.

Reimplemented in protocols::flxbb::FlxbbDesignPack, protocols::dna::DnaInterfacePacker, protocols::dna::DnaInterfaceMultiStateDesign, protocols::dna::DesignProteinBackboneAroundDNA, protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover, protocols::simple_moves::SetReturningPackRotamersMover, and protocols::protein_interface_design::movers::PrepackMover.

Definition at line 132 of file PackRotamersMover.cc.

References nloop_, run(), and setup().

Referenced by protocols::simple_moves::ForceDisulfidesMover::apply(), protocols::protein_interface_design::movers::PrepackMover::apply(), protocols::abinitio::ResolutionSwitcher::apply(), protocols::rbsegment_relax::RBSegmentRelax::apply(), protocols::simple_moves::ConsensusDesignMover::apply(), protocols::protein_interface_design::movers::LoopRemodel::apply(), protocols::comparative_modeling::LoopRelaxMover::apply(), protocols::protein_interface_design::movers::Splice::apply(), protocols::toolbox::pose_metric_calculators::RotamerBoltzCalculator::computeBoltzWeight(), protocols::hotspot_hashing::HotspotStubSet::create_hotspot_after_pose(), protocols::frag_picker::FragmentCandidate::output_silent(), protocols::optimize_weights::IterativeOptEDriver::repack_and_minimize_pose(), and protocols::topology_broker::TopologyBroker::switch_to_fullatom().

protocols::moves::MoverOP protocols::simple_moves::PackRotamersMover::clone ( ) const

virtual

required in the context of the parser/scripting scheme

Reimplemented from protocols::moves::Mover.

Reimplemented in protocols::dna::DnaInterfacePacker, protocols::dna::DnaInterfaceMultiStateDesign, protocols::simple_moves::symmetry::SymPackRotamersMover, protocols::dna::DesignProteinBackboneAroundDNA, protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover, and protocols::protein_interface_design::movers::PrepackMover.

Definition at line 258 of file PackRotamersMover.cc.

Referenced by parse_def().

protocols::moves::MoverOP protocols::simple_moves::PackRotamersMover::fresh_instance ( ) const

virtual

required in the context of the parser/scripting scheme

Reimplemented from protocols::moves::Mover.

Reimplemented in protocols::dna::DnaInterfacePacker, protocols::dna::DnaInterfaceMultiStateDesign, protocols::simple_moves::symmetry::SymPackRotamersMover, protocols::dna::DesignProteinBackboneAroundDNA, protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover, and protocols::protein_interface_design::movers::PrepackMover.

Definition at line 251 of file PackRotamersMover.cc.

References PackRotamersMover().

std::string protocols::simple_moves::PackRotamersMover::get_name ( ) const

virtual

Each derived class must specify its name. The class name.

Implements protocols::moves::Mover.

Reimplemented in protocols::flxbb::FlxbbDesignPack, protocols::dna::DnaInterfacePacker, protocols::simple_moves::symmetry::SymPackRotamersMover, protocols::dna::DnaInterfaceMultiStateDesign, protocols::dna::DesignProteinBackboneAroundDNA, protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover, protocols::simple_moves::SetReturningPackRotamersMover, and protocols::protein_interface_design::movers::PrepackMover.

Definition at line 158 of file PackRotamersMover.cc.

References protocols::simple_moves::PackRotamersMoverCreator::mover_name().

interaction_graph::InteractionGraphBaseCOP protocols::simple_moves::PackRotamersMover::ig ( ) const

Definition at line 347 of file PackRotamersMover.cc.

References ig_.

Referenced by protocols::dna::DnaInterfacePacker::initialized().

void protocols::simple_moves::PackRotamersMover::nloop ( core::Size nloop_in)

Definition at line 340 of file PackRotamersMover.cc.

References nloop_.

Referenced by PackRotamersMover().

core::Size protocols::simple_moves::PackRotamersMover::nloop ( ) const

inline

Definition at line 188 of file PackRotamersMover.hh.

References nloop_.

Referenced by protocols::simple_moves::PackRotamersMoverLazy::apply_to_rotpack(), and protocols::simple_moves::PackRotamersMoverLazy::parse_my_tag().

void protocols::simple_moves::PackRotamersMover::note_packertask_settings ( Pose const & pose)

protectedvirtual

note PackerTask's packable and designable residues as string info

Definition at line 297 of file PackRotamersMover.cc.

References core::sequence::end, protocols::moves::Mover::info(), core::pose::Pose::pdb_info(), and task_.

Referenced by setup().

void protocols::simple_moves::PackRotamersMover::parse_def	(	utility::lua::LuaObject const &	def,
		utility::lua::LuaObject const &	score_fxns,
		utility::lua::LuaObject const &	tasks,
		protocols::moves::MoverCacheSP	cache
	)

virtual

Reimplemented from protocols::moves::Mover.

Reimplemented in protocols::simple_moves::symmetry::SymPackRotamersMover.

Definition at line 174 of file PackRotamersMover.cc.

References clone(), nloop_, protocols::elscripts::parse_scoredef(), protocols::elscripts::parse_taskdef(), score_function(), and task_factory().

Referenced by protocols::simple_moves::symmetry::SymPackRotamersMover::parse_def().

void protocols::simple_moves::PackRotamersMover::parse_my_tag	(	TagPtr const	tag,
		protocols::moves::DataMap &	datamap,
		Filters_map const &	filters,
		protocols::moves::Movers_map const &	movers,
		Pose const &	pose
	)

virtual

allow non-const access to the internal minimizer options object

parse XML (specifically in the context of the parser/scripting scheme)

Reimplemented from protocols::moves::Mover.

Reimplemented in protocols::dna::DnaInterfacePacker, protocols::simple_moves::PackRotamersMoverLazy, protocols::simple_moves::symmetry::SymPackRotamersMover, protocols::dna::DnaInterfaceMultiStateDesign, protocols::dna::DesignProteinBackboneAroundDNA, protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover, and protocols::protein_interface_design::movers::PrepackMover.

Definition at line 197 of file PackRotamersMover.cc.

References nloop_, parse_score_function(), and parse_task_operations().

Referenced by protocols::simple_moves::symmetry::SymPackRotamersMover::parse_my_tag().

void protocols::simple_moves::PackRotamersMover::parse_score_function	(	TagPtr const	tag,
		protocols::moves::DataMap const &	datamap,
		Filters_map const &	,
		protocols::moves::Movers_map const &	,
		Pose const &
	)

virtual

parse "scorefxn" XML option (can be employed virtually by derived Packing movers)

Definition at line 221 of file PackRotamersMover.cc.

References protocols::rosetta_scripts::parse_score_function(), and score_function().

Referenced by protocols::dna::DesignProteinBackboneAroundDNA::parse_my_tag(), protocols::dna::DnaInterfaceMultiStateDesign::parse_my_tag(), protocols::simple_moves::PackRotamersMoverLazy::parse_my_tag(), protocols::dna::DnaInterfacePacker::parse_my_tag(), and parse_my_tag().

void protocols::simple_moves::PackRotamersMover::parse_task_operations	(	TagPtr const	tag,
		protocols::moves::DataMap const &	datamap,
		Filters_map const &	,
		protocols::moves::Movers_map const &	,
		Pose const &
	)

virtual

parse "task_operations" XML option (can be employed virtually by derived Packing movers)

Definition at line 236 of file PackRotamersMover.cc.

References protocols::rosetta_scripts::parse_task_operations(), and task_factory().

Referenced by protocols::dna::DesignProteinBackboneAroundDNA::parse_my_tag(), protocols::dna::DnaInterfaceMultiStateDesign::parse_my_tag(), protocols::simple_moves::PackRotamersMoverLazy::parse_my_tag(), protocols::dna::DnaInterfacePacker::parse_my_tag(), and parse_my_tag().

rotamer_set::RotamerSetsCOP protocols::simple_moves::PackRotamersMover::rotamer_sets ( ) const

Definition at line 346 of file PackRotamersMover.cc.

References rotamer_sets_.

Referenced by protocols::toolbox::pose_metric_calculators::RotamerBoltzCalculator::computeBoltzWeight(), protocols::dna::DnaInterfacePacker::initialized(), protocols::dna::DnaInterfacePacker::make_dna_sequence_combinations(), protocols::dna::DnaInterfacePacker::measure_specificities(), protocols::dna::DnaInterfacePacker::protein_scan(), protocols::dna::DnaInterfacePacker::reversion_scan(), and protocols::dna::DnaInterfacePacker::standard_packing().

core::PackerEnergy protocols::simple_moves::PackRotamersMover::run	(	Pose &	pose,
		utility::vector0< int >	rot_to_pack = `utility::vector0< int >()`
	)		const

protectedvirtual

Reimplemented in protocols::simple_moves::symmetry::SymPackRotamersMover.

Definition at line 291 of file PackRotamersMover.cc.

References ig_, core::pack::pack_rotamers_run(), rotamer_sets_, and task_.

Referenced by protocols::simple_moves::SetReturningPackRotamersMover::apply(), apply(), protocols::flxbb::FlxbbDesignPack::apply(), protocols::simple_moves::PackRotamersMoverLazy::apply_to_rotpack(), protocols::dna::DnaInterfacePacker::measure_specificities(), protocols::dna::DnaInterfacePacker::protein_scan(), protocols::dna::DnaInterfacePacker::reversion_scan(), and protocols::dna::DnaInterfacePacker::standard_packing().

void protocols::simple_moves::PackRotamersMover::score_function ( ScoreFunctionCOP sf)

Sets the ScoreFunction to <sf>

example(s): packmover.score_function(scorefxn) See Also: PackRotamersMover PackRotamersMover.task

Definition at line 327 of file PackRotamersMover.cc.

References scorefxn_.

Referenced by protocols::simple_moves::operator<<(), and PackRotamersMover().

ScoreFunctionCOP protocols::simple_moves::PackRotamersMover::score_function ( ) const

Returns the ScoreFunction.

example(s): packmover.score_function() See Also: PackRotamersMover PackRotamersMover.task

Definition at line 343 of file PackRotamersMover.cc.

References scorefxn_.

void protocols::simple_moves::PackRotamersMover::setup ( Pose & pose)

protectedvirtual

get rotamers, energies. Also performs lazy initialization of ScoreFunction, PackerTask.

Reimplemented in protocols::simple_moves::symmetry::SymPackRotamersMover.

Definition at line 264 of file PackRotamersMover.cc.

References core::scoring::ScoreFunctionFactory::create_score_function(), ig_, note_packertask_settings(), core::pack::pack_rotamers_setup(), rotamer_sets_, scorefxn_, core::pack::setup_IG_res_res_weights(), core::scoring::STANDARD_WTS, task_, task_factory_, task_is_valid(), and core::pose::Pose::update_residue_neighbors().

Referenced by protocols::simple_moves::SetReturningPackRotamersMover::apply(), apply(), protocols::flxbb::FlxbbDesignPack::apply(), protocols::simple_moves::PackRotamersMoverLazy::call_setup(), and protocols::dna::DnaInterfacePacker::init_standard().

void protocols::simple_moves::PackRotamersMover::task ( PackerTaskCOP t)

Sets the PackerTask to <t>

example(s): packmover.task(task_pack) See Also: PackRotamersMover PackRotamersMover.task_factory

Referenced by protocols::toolbox::pose_metric_calculators::RotamerBoltzCalculator::computeBoltzWeight(), and PackRotamersMover().

PackerTaskCOP protocols::simple_moves::PackRotamersMover::task ( ) const

Returns the PackerTask.

example(s): packmover.task() See Also: PackRotamersMover PackRotamersMover.task_factory

Definition at line 344 of file PackRotamersMover.cc.

References task_.

void protocols::simple_moves::PackRotamersMover::task_factory ( TaskFactoryCOP tf)

Sets the TaskFactory to <tf>

example(s): packmover.task_factory(task_design) See Also: PackRotamersMover PackRotamersMover.task

Definition at line 334 of file PackRotamersMover.cc.

References task_factory_.

Referenced by protocols::anchored_design::AnchoredRefineMover::apply(), protocols::anchored_design::AnchoredDesignMover::delete_interface_native_sidechains(), protocols::optimize_weights::IterativeOptEDriver::measure_rotamer_recovery(), PackRotamersMover(), and protocols::optimize_weights::IterativeOptEDriver::repack_and_minimize_pose().

TaskFactoryCOP protocols::simple_moves::PackRotamersMover::task_factory ( ) const

Returns the TaskFactory.

example(s): packmover.task_factory() See Also: PackRotamersMover PackRotamersMover.task

Definition at line 345 of file PackRotamersMover.cc.

References task_factory_.

Referenced by protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover::add_states(), protocols::protein_interface_design::movers::PrepackMover::apply(), protocols::simple_moves::SetReturningPackRotamersMover::apply(), protocols::dna::DesignProteinBackboneAroundDNA::apply(), protocols::dna::DnaInterfacePacker::init_standard(), protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover::initialize(), protocols::dna::DnaInterfaceMultiStateDesign::initialize(), protocols::dna::DnaInterfacePacker::initialized(), protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover::output_alternative_states(), parse_def(), protocols::protein_interface_design::movers::PrepackMover::parse_my_tag(), protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover::parse_my_tag(), parse_task_operations(), and protocols::simple_moves::symmetry::SymPackRotamersMover::setup().

bool protocols::simple_moves::PackRotamersMover::task_is_valid ( Pose const & pose) const

when the PackerTask was not generated locally, verify compatibility with pose

the pose residue types must be equivalent to the ones used to generate the ResidueLevelTasks, because of the way that prevent_repacking and its associated flags work

Definition at line 165 of file PackRotamersMover.cc.

References core::pose::Pose::residue_type(), task_, and core::pose::Pose::total_residue().

Referenced by protocols::simple_moves::SetReturningPackRotamersMover::apply(), and setup().