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antibody2 → core Relation

File in src/protocols/antibody2Includes file in src/core
Ab_TemplateInfo.ccimport_pose / import_pose.hh
Ab_TemplateInfo.ccpose / PDBInfo.fwd.hh
Ab_TemplateInfo.ccpose / PDBInfo.hh
Ab_TemplateInfo.hhpose / Pose.hh
AntibodyInfo.ccpose / PDBInfo.hh
AntibodyInfo.ccscoring / rms_util.hh
AntibodyInfo.ccscoring / ScoreFunctionFactory.hh
AntibodyInfo.ccscoring / ScoreType.hh
AntibodyInfo.ccpose / util.hh
AntibodyInfo.ccpose / util.tmpl.hh
AntibodyInfo.hhkinematics / FoldTree.hh
AntibodyInfo.hhkinematics / MoveMap.hh
AntibodyInfo.hhscoring / ScoreFunction.hh
AntibodyInfo.hhpack / task / TaskFactory.hh
AntibodyModelerProtocol.ccpose / datacache / CacheableDataType.hh
AntibodyModelerProtocol.ccchemical / ChemicalManager.hh
AntibodyModelerProtocol.ccscoring / constraints / ConstraintFactory.hh
AntibodyModelerProtocol.ccscoring / constraints / ConstraintIO.hh
AntibodyModelerProtocol.ccscoring / Energies.hh
AntibodyModelerProtocol.ccimport_pose / import_pose.hh
AntibodyModelerProtocol.ccpack / task / PackerTask.hh
AntibodyModelerProtocol.ccpose / PDBInfo.hh
AntibodyModelerProtocol.ccio / pdb / pose_io.hh
AntibodyModelerProtocol.ccchemical / ResidueSelector.hh
AntibodyModelerProtocol.ccpack / dunbrack / RotamerConstraint.hh
AntibodyModelerProtocol.ccscoring / ScoreFunction.hh
AntibodyModelerProtocol.ccscoring / ScoreFunctionFactory.hh
AntibodyModelerProtocol.ccscoring / ScoreType.hh
AntibodyModelerProtocol.ccio / silent / SilentStruct.hh
AntibodyModelerProtocol.ccio / silent / SilentStructFactory.hh
AntibodyModelerProtocol.ccpack / task / TaskFactory.hh
AntibodyModelerProtocol.ccpack / task / operation / TaskOperations.hh
AntibodyModelerProtocol.ccpack / rotamer_set / UnboundRotamersOperation.hh
AntibodyModelerProtocol.ccpose / util.hh
AntibodyModelerProtocol.ccchemical / VariantType.hh
AntibodyModelerProtocol.hhpose / Pose.hh
AntibodyModelerProtocol.hhscoring / ScoreFunction.fwd.hh
AntibodyModelerProtocol.hhpack / task / TaskFactory.fwd.hh
AntibodyModelerProtocol.hhtypes.hh
AntibodyUtil.ccid / AtomID_Map.hh
AntibodyUtil.cckinematics / FoldTree.hh
AntibodyUtil.ccimport_pose / import_pose.hh
AntibodyUtil.ccpack / task / operation / NoRepackDisulfides.hh
AntibodyUtil.ccpack / task / operation / OperateOnCertainResidues.hh
AntibodyUtil.ccpack / task / operation / OptH.hh
AntibodyUtil.ccpack / task / PackerTask.hh
AntibodyUtil.ccpose / PDBInfo.hh
AntibodyUtil.ccpose / Pose.hh
AntibodyUtil.ccpack / task / operation / ResFilters.hh
AntibodyUtil.ccpack / task / operation / ResLvlTaskOperations.hh
AntibodyUtil.ccscoring / rms_util.hh
AntibodyUtil.ccscoring / rms_util.tmpl.hh
AntibodyUtil.ccpack / dunbrack / RotamerConstraint.hh
AntibodyUtil.ccpack / task / TaskFactory.hh
AntibodyUtil.ccpack / task / operation / TaskOperations.hh
AntibodyUtil.cctypes.hh
AntibodyUtil.ccpack / rotamer_set / UnboundRotamersOperation.hh
AntibodyUtil.ccpose / util.hh
AntibodyUtil.ccpose / util.tmpl.hh
AntibodyUtil.hhkinematics / MoveMap.hh
AntibodyUtil.hhpose / Pose.fwd.hh
AntibodyUtil.hhpose / Pose.hh
AntibodyUtil.hhpack / task / TaskFactory.fwd.hh
AntibodyUtil.hhtypes.hh
CDRsMinPackMin.cckinematics / MoveMap.hh
CDRsMinPackMin.ccpack / task / PackerTask.hh
CDRsMinPackMin.ccscoring / ScoreFunction.hh
CDRsMinPackMin.ccscoring / ScoreFunctionFactory.hh
CDRsMinPackMin.ccpack / task / TaskFactory.hh
CDRsMinPackMin.ccpose / util.hh
CDRsMinPackMin.ccchemical / VariantType.hh
CDRsMinPackMin.hhkinematics / FoldTree.fwd.hh
CDRsMinPackMin.hhkinematics / MoveMap.fwd.hh
CDRsMinPackMin.hhpose / Pose.hh
CDRsMinPackMin.hhscoring / ScoreFunction.fwd.hh
CDRsMinPackMin.hhpack / task / TaskFactory.fwd.hh
CDRsMinPackMin.hhtypes.hh
CloseOneCDRLoop.ccconformation / Conformation.hh
CloseOneCDRLoop.cckinematics / FoldTree.hh
CloseOneCDRLoop.cckinematics / MoveMap.hh
CloseOneCDRLoop.ccpose / Pose.hh
CloseOneCDRLoop.hhkinematics / MoveMap.fwd.hh
CloseOneCDRLoop.hhpose / Pose.hh
GraftCDRLoopsProtocol.ccscoring / Energies.hh
GraftCDRLoopsProtocol.ccimport_pose / import_pose.hh
GraftCDRLoopsProtocol.ccpose / PDBInfo.hh
GraftCDRLoopsProtocol.ccio / pdb / pose_io.hh
GraftCDRLoopsProtocol.ccscoring / ScoreFunctionFactory.hh
GraftCDRLoopsProtocol.ccscoring / ScoreType.hh
GraftCDRLoopsProtocol.ccpack / task / TaskFactory.hh
GraftCDRLoopsProtocol.ccpose / util.hh
GraftCDRLoopsProtocol.hhpose / Pose.hh
GraftCDRLoopsProtocol.hhscoring / ScoreFunction.hh
GraftCDRLoopsProtocol.hhpack / task / TaskFactory.fwd.hh
GraftOneCDRLoop.ccid / AtomID_Map.hh
GraftOneCDRLoop.ccimport_pose / import_pose.hh
GraftOneCDRLoop.ccscoring / rms_util.tmpl.hh
GraftOneCDRLoop.ccscoring / ScoreFunctionFactory.hh
GraftOneCDRLoop.ccpose / util.hh
GraftOneCDRLoop.ccpose / util.tmpl.hh
GraftOneCDRLoop.hhpose / Pose.hh
GraftOneCDRLoop.hhscoring / ScoreFunction.fwd.hh
H3CterInsert.ccfragment / BBTorsionSRFD.hh
H3CterInsert.cckinematics / FoldTree.hh
H3CterInsert.hhfragment / FragData.hh
H3PerturbCCD.ccfragment / BBTorsionSRFD.hh
H3PerturbCCD.cckinematics / FoldTree.hh
H3PerturbCCD.ccfragment / FragData.hh
H3PerturbCCD.ccfragment / FragSet.hh
H3PerturbCCD.ccfragment / Frame.hh
H3PerturbCCD.ccfragment / FrameIterator.hh
H3PerturbCCD.ccfragment / FrameList.hh
H3PerturbCCD.ccimport_pose / import_pose.hh
H3PerturbCCD.cckinematics / Jump.hh
H3PerturbCCD.ccpose / PDBInfo.hh
H3PerturbCCD.ccpose / Pose.hh
H3PerturbCCD.ccio / pdb / pose_io.hh
H3PerturbCCD.ccscoring / ScoreFunction.hh
H3PerturbCCD.ccscoring / ScoreFunctionFactory.hh
H3PerturbCCD.ccpose / util.hh
H3PerturbCCD.ccchemical / VariantType.hh
H3PerturbCCD.hhfragment / FragSet.hh
H3PerturbCCD.hhpose / Pose.hh
H3PerturbCCD.hhscoring / ScoreFunction.hh
H3PerturbCCD.hhpack / task / TaskFactory.fwd.hh
H3RefineCCD.ccscoring / constraints / ConstraintFactory.hh
H3RefineCCD.ccscoring / constraints / ConstraintIO.hh
H3RefineCCD.cckinematics / FoldTree.hh
H3RefineCCD.ccimport_pose / import_pose.hh
H3RefineCCD.cckinematics / MoveMap.hh
H3RefineCCD.ccpack / task / operation / NoRepackDisulfides.hh
H3RefineCCD.ccpack / task / operation / OperateOnCertainResidues.hh
H3RefineCCD.ccpack / task / PackerTask.hh
H3RefineCCD.ccpose / PDBInfo.hh
H3RefineCCD.ccpose / Pose.hh
H3RefineCCD.ccio / pdb / pose_io.hh
H3RefineCCD.ccpack / task / operation / ResFilters.hh
H3RefineCCD.ccpack / task / operation / ResLvlTaskOperations.hh
H3RefineCCD.ccscoring / ScoreFunction.hh
H3RefineCCD.ccscoring / ScoreFunctionFactory.hh
H3RefineCCD.ccpack / task / TaskFactory.hh
H3RefineCCD.ccpack / task / operation / TaskOperations.hh
H3RefineCCD.ccpose / util.hh
H3RefineCCD.ccchemical / VariantType.hh
H3RefineCCD.hhkinematics / MoveMap.fwd.hh
H3RefineCCD.hhpose / Pose.hh
H3RefineCCD.hhscoring / ScoreFunction.hh
H3RefineCCD.hhpack / task / TaskFactory.hh
LHRepulsiveRamp.cckinematics / MoveMap.hh
LHRepulsiveRamp.ccpose / PDBInfo.hh
LHRepulsiveRamp.ccpose / Pose.hh
LHRepulsiveRamp.ccscoring / ScoreFunction.hh
LHRepulsiveRamp.ccscoring / ScoreFunctionFactory.hh
LHRepulsiveRamp.ccpack / task / TaskFactory.hh
LHRepulsiveRamp.ccpose / util.hh
LHRepulsiveRamp.hhscoring / ScoreFunction.hh
LHRepulsiveRamp.hhpack / task / TaskFactory.hh
LHRepulsiveRampLegacy.ccpose / datacache / CacheableDataType.hh
LHRepulsiveRampLegacy.ccimport_pose / import_pose.hh
LHRepulsiveRampLegacy.ccpack / task / operation / NoRepackDisulfides.hh
LHRepulsiveRampLegacy.ccpack / task / operation / OperateOnCertainResidues.hh
LHRepulsiveRampLegacy.ccpack / task / operation / OptH.hh
LHRepulsiveRampLegacy.ccpack / task / PackerTask.hh
LHRepulsiveRampLegacy.ccpose / PDBInfo.hh
LHRepulsiveRampLegacy.ccpose / Pose.hh
LHRepulsiveRampLegacy.ccpack / task / operation / ResFilters.hh
LHRepulsiveRampLegacy.ccpack / task / operation / ResLvlTaskOperations.hh
LHRepulsiveRampLegacy.ccpack / dunbrack / RotamerConstraint.hh
LHRepulsiveRampLegacy.ccscoring / ScoreFunction.hh
LHRepulsiveRampLegacy.ccscoring / ScoreFunctionFactory.hh
LHRepulsiveRampLegacy.ccpack / task / TaskFactory.hh
LHRepulsiveRampLegacy.ccpack / task / operation / TaskOperations.hh
LHRepulsiveRampLegacy.ccpack / rotamer_set / UnboundRotamersOperation.hh
LHRepulsiveRampLegacy.ccpose / util.hh
LHRepulsiveRampLegacy.ccchemical / VariantType.hh
LHRepulsiveRampLegacy.hhpose / Pose.hh
LHRepulsiveRampLegacy.hhscoring / ScoreFunction.hh
LHRepulsiveRampLegacy.hhpack / task / TaskFactory.hh
LHSnugFitLegacy.ccpose / datacache / CacheableDataType.hh
LHSnugFitLegacy.ccimport_pose / import_pose.hh
LHSnugFitLegacy.ccpack / task / operation / NoRepackDisulfides.hh
LHSnugFitLegacy.ccpack / task / operation / OperateOnCertainResidues.hh
LHSnugFitLegacy.ccpack / task / operation / OptH.hh
LHSnugFitLegacy.ccpack / task / PackerTask.hh
LHSnugFitLegacy.ccpose / PDBInfo.hh
LHSnugFitLegacy.ccpose / Pose.hh
LHSnugFitLegacy.ccpack / task / operation / ResFilters.hh
LHSnugFitLegacy.ccpack / task / operation / ResLvlTaskOperations.hh
LHSnugFitLegacy.ccpack / dunbrack / RotamerConstraint.hh
LHSnugFitLegacy.ccscoring / ScoreFunction.hh
LHSnugFitLegacy.ccscoring / ScoreFunctionFactory.hh
LHSnugFitLegacy.ccpack / task / TaskFactory.hh
LHSnugFitLegacy.ccpack / task / operation / TaskOperations.hh
LHSnugFitLegacy.ccpack / rotamer_set / UnboundRotamersOperation.hh
LHSnugFitLegacy.ccpose / util.hh
LHSnugFitLegacy.ccchemical / VariantType.hh
LHSnugFitLegacy.hhpose / Pose.hh
LHSnugFitLegacy.hhpack / task / TaskFactory.hh
ModelCDRH3.ccchemical / ChemicalManager.fwd.hh
ModelCDRH3.ccimport_pose / import_pose.hh
ModelCDRH3.ccpose / PDBInfo.hh
ModelCDRH3.ccscoring / ScoreFunction.hh
ModelCDRH3.ccscoring / ScoreFunctionFactory.hh
ModelCDRH3.ccpack / task / TaskFactory.hh
ModelCDRH3.ccpose / util.hh
ModelCDRH3.hhfragment / FragData.fwd.hh
ModelCDRH3.hhfragment / FragSet.fwd.hh
ModelCDRH3.hhpose / Pose.hh
ModelCDRH3.hhscoring / ScoreFunction.hh
ModelCDRH3.hhpack / task / TaskFactory.hh
RefineBetaBarrel.ccpose / PDBInfo.hh
RefineBetaBarrel.ccconformation / Residue.hh
RefineBetaBarrel.ccchemical / ResidueType.hh
RefineBetaBarrel.ccscoring / ScoreFunction.hh
RefineBetaBarrel.ccscoring / ScoreFunctionFactory.hh
RefineBetaBarrel.ccpose / util.hh
RefineBetaBarrel.ccchemical / VariantType.hh
RefineBetaBarrel.hhscoring / ScoreFunction.fwd.hh
RefineBetaBarrel.hhpack / task / TaskFactory.fwd.hh
RefineOneCDRLoop.ccscoring / constraints / ConstraintFactory.hh
RefineOneCDRLoop.ccscoring / constraints / ConstraintIO.hh
RefineOneCDRLoop.ccscoring / Energies.hh
RefineOneCDRLoop.ccpose / Pose.hh
RefineOneCDRLoop.ccscoring / ScoreFunction.hh
RefineOneCDRLoop.ccscoring / ScoreFunctionFactory.hh
RefineOneCDRLoop.ccpack / task / TaskFactory.hh
RefineOneCDRLoop.ccchemical / VariantType.hh
RefineOneCDRLoop.hhpose / Pose.hh
RefineOneCDRLoop.hhscoring / ScoreFunction.hh
RefineOneCDRLoop.hhpack / task / TaskFactory.hh
RefineOneCDRLoopCentroid.cckinematics / FoldTree.hh
RefineOneCDRLoopCentroid.cckinematics / MoveMap.hh
RefineOneCDRLoopCentroid.ccpose / PDBInfo.hh
RefineOneCDRLoopCentroid.ccpose / Pose.hh
RefineOneCDRLoopCentroid.ccio / pdb / pose_io.hh
RefineOneCDRLoopCentroid.ccscoring / ScoreFunction.hh
RefineOneCDRLoopCentroid.ccscoring / ScoreFunctionFactory.hh
RefineOneCDRLoopCentroid.ccpose / util.hh
RefineOneCDRLoopCentroid.ccchemical / VariantType.hh
RefineOneCDRLoopCentroid.hhkinematics / MoveMap.fwd.hh
RefineOneCDRLoopCentroid.hhpose / Pose.hh
RefineOneCDRLoopCentroid.hhscoring / ScoreFunction.fwd.hh
SnugDock.ccchemical / ChemicalManager.fwd.hh
SnugDock.ccpose / Pose.hh
SnugDock.ccscoring / ScoreFunctionFactory.hh
SnugDock.cctypes.hh
SnugDock.hhscoring / ScoreFunction.fwd.hh
SnugDockProtocol.ccpose / Pose.hh
SnugDockProtocol.ccscoring / ScoreFunctionFactory.hh
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