simple_moves Directory Reference

Directory dependency graph for simple_moves:

Directories
directory	asym_fold_and_dock
directory	carbohydrates
directory	chiral
directory	hbs
directory	oop
directory	rational_mc
directory	sidechain_moves
directory	symmetry

Files
file	AddCavitiesMover.cc [code]
file	AddCavitiesMover.hh [code]
file	AddConstraintsToCurrentConformationMover.cc [code]
	Add constraints to the current pose conformation.
file	AddConstraintsToCurrentConformationMover.hh [code]
	Add constraints to the current pose conformation.
file	AddConstraintsToCurrentConformationMoverCreator.hh [code]
file	BackboneMover.cc [code]
file	BackboneMover.fwd.hh [code]
	BackboneMover forward declarations header.
file	BackboneMover.hh [code]
file	BackboneMoverCreator.hh [code]
	This class will create instances of protocols::moves::Movers SmallMover and ShearMover for the protocols::moves::MoverFactory.
file	BBConRotMover.cc [code]
file	BBConRotMover.fwd.hh [code]
file	BBConRotMover.hh [code]
file	BBGaussianMover.cc [code]
file	BBGaussianMover.fwd.hh [code]
	-*- mode:c++;tab-width:2;indent-tabs-mode:t;show-trailing-whitespace:t;rm-trailing-spaces:t -*-
file	BBGaussianMover.hh [code]
file	ClearConstraintsMover.cc [code]
	Add constraints to the current pose conformation.
file	ClearConstraintsMover.hh [code]
	Add constraints to the current pose conformation.
file	ClearConstraintsMoverCreator.hh [code]
file	ConsensusDesignMover.cc [code]
	cc file for ConsensusDesignMover
file	ConsensusDesignMover.fwd.hh [code]
	fwd.hh file for ConsensusDesignMover
file	ConsensusDesignMover.hh [code]
	header file for ConsensusDesignMover
file	ConsensusDesignMoverCreator.hh [code]
file	ConstraintFragmentMover.hh [code]
file	ConstrainToIdealMover.cc [code]
	Adds to your pose constraints suitable for idealization of bond lengths and angles.
file	ConstrainToIdealMover.fwd.hh [code]
	ConstrainToIdealMover forward declarations header.
file	ConstrainToIdealMover.hh [code]
	Adds to your pose constraints suitable for idealization of bond lengths and angles.
file	ConstraintSetMover.cc [code]
	Assigns a ConstraintSet to a pose. Reads and creats ConstraintSet from file via command line option -constraints::cst_file, unless a ConstraintSet is supplied via the constructor or the constraint_set() method.
file	ConstraintSetMover.fwd.hh [code]
file	ConstraintSetMover.hh [code]
	Assigns a ConstraintSet to a pose. Reads and creats ConstraintSet from file via command line option -constraints::cst_file, unless a ConstraintSet is supplied via the constructor or the constraint_set() method.
file	ConstraintSetMoverCreator.hh [code]
file	CutChainMover.cc [code]
file	CutChainMover.fwd.hh [code]
file	CutChainMover.hh [code]
file	CutChainMoverCreator.hh [code]
file	ddG.cc [code]
	implementation of the ddG class for computing interface delta dGs
file	ddG.fwd.hh [code]
	Forward declarations for ddG.
file	ddG.hh [code]
file	ddGCreator.hh [code]
file	DesignRepackMover.cc [code]
file	DesignRepackMover.fwd.hh [code]
	Forward declations for DesignRepackMover.
file	DesignRepackMover.hh [code]
file	DME_FilterMover.cc [code]
file	DME_FilterMover.hh [code]
file	DOFHistogramRecorder.cc [code]
file	DOFHistogramRecorder.fwd.hh [code]
	Forward declarations for class DOFHistogramRecorder.
file	DOFHistogramRecorder.hh [code]
file	DumpPdb.cc [code]
file	DumpPdb.hh [code]
file	DumpPdbCreator.hh [code]
file	ExtendedPoseMover.cc [code]
file	ExtendedPoseMover.fwd.hh [code]
file	ExtendedPoseMover.hh [code]
file	ExtendedPoseMoverCreator.cc [code]
file	ExtendedPoseMoverCreator.hh [code]
file	FavorSequenceProfile.cc [code]
	Add a SequenceProfileConstraint to a pose.
file	FavorSequenceProfile.hh [code]
	Add a SequenceProfileConstraint to a pose.
file	FavorSequenceProfileCreator.hh [code]
	Declaration of the protocols::moves::MoverCreator class for the FavorSequenceProfile.
file	ForceDisulfidesMover.cc [code]
file	ForceDisulfidesMover.fwd.hh [code]
	ForceDisulfidesMover forward declarations header.
file	ForceDisulfidesMover.hh [code]
file	ForceDisulfidesMoverCreator.hh [code]
file	FragmentMover.cc [code]
file	FragmentMover.fwd.hh [code]
file	FragmentMover.hh [code]
file	GenericMonteCarloMover.cc [code]
file	GenericMonteCarloMover.fwd.hh [code]
file	GenericMonteCarloMover.hh [code]
	perform a given mover and sample structures by MonteCarlo
file	GenericMonteCarloMoverCreator.hh [code]
file	GreenPacker.cc [code]
	packing mover that makes extensive reuse of rotamer pair energies class definition
file	GreenPacker.fwd.hh [code]
	packing mover that makes extensive reuse of rotamer pair energies class forward declaration
file	GreenPacker.hh [code]
	packing mover that makes extensive reuse of rotamer pair energies class declaration
file	GunnCost.cc [code]
file	GunnCost.hh [code]
file	HelicalPeptideLengthMover.cc [code]
	Appends or prepends a single residue to a helical peptide that's attached to the rest of the pose by a jump.
file	HelicalPeptideLengthMover.fwd.hh [code]
file	HelicalPeptideLengthMover.hh [code]
	Definition of classes for changing the length of a helical peptide that's connected to the rest of the pose by a jump.
file	LoadPDBMover.cc [code]
	simple mover that loads a pdb from file and replaces the current pdb with it. Useful for checkpointing
file	LoadPDBMover.fwd.hh [code]
	switch the chain order
file	LoadPDBMover.hh [code]
	switch the chain order
file	LoadPDBMoverCreator.hh [code]
file	LoadUnboundRotMover.cc [code]
	LoadUnboundRotMover methods implemented.
file	LoadUnboundRotMover.fwd.hh [code]
file	LoadUnboundRotMover.hh [code]
file	LoadUnboundRotMoverCreator.hh [code]
file	MakePolyXMover.cc [code]
	convert pose to poly XXX: any amino acid, default poly Ala
file	MakePolyXMover.fwd.hh [code]
	convert pose to poly XXX: any amino acid, default poly Ala
file	MakePolyXMover.hh [code]
	header file of MakePolyXMover.cc
file	MakePolyXMoverCreator.hh [code]
	This class will create instances of protocols::moves::Mover MakePolyXMover for the protocols::moves::MoverFactory.
file	MembraneTopology.cc [code]
file	MembraneTopology.fwd.hh [code]
file	MembraneTopology.hh [code]
file	MembraneTopologyCreator.hh [code]
file	MinMover.cc [code]
file	MinMover.fwd.hh [code]
	MinMover forward declarations header.
file	MinMover.hh [code]
file	MinMoverCreator.hh [code]
file	MinPackMover.cc [code]
	Implementation of the MinPackMover class; a wrapper class for invoking core::pack::min_pack.
file	MinPackMover.fwd.hh [code]
	Forward declaration of the mover class to both pack and minimize rotamers.
file	MinPackMover.hh [code]
	protocols::moves::Mover class to invoke core::pack::min_pack
file	MinPackMoverCreator.hh [code]
	This class will create instances of protocols::moves::Mover MinPackMover for the protocols::moves::MoverFactory.
file	MissingDensityToJumpMover.cc [code]
	Implementation of mover that inserts a jump where there is gap in the pdb. This gap corresponds to missing density.
file	MissingDensityToJumpMover.fwd.hh [code]
	Implementation of mover that inserts a jump where there is gap in the pdb. This gap corresponds to missing density.
file	MissingDensityToJumpMover.hh [code]
file	ModifyVariantTypeMover.cc [code]
	Modify variant type to residues.
file	ModifyVariantTypeMover.fwd.hh [code]
file	ModifyVariantTypeMover.hh [code]
file	ModifyVariantTypeMoverCreator.hh [code]
file	MonteCarloRecover.cc [code]
file	MonteCarloRecover.fwd.hh [code]
file	MonteCarloRecover.hh [code]
file	MonteCarloRecoverCreator.hh [code]
file	MonteCarloTest.cc [code]
file	MonteCarloTest.fwd.hh [code]
file	MonteCarloTest.hh [code]
	perform a given mover and sample structures by MonteCarlo
file	MonteCarloTestCreator.hh [code]
file	MutateResidue.cc [code]
file	MutateResidue.fwd.hh [code]
file	MutateResidue.hh [code]
file	MutateResidueCreator.hh [code]
file	O2M_MutateMover.cc [code]
	Mover that takes a single starting structure and some task ops, and produces every single possible point mutation DOES NOT WORK WITH ROSETTASCRIPTS.
file	O2M_MutateMover.fwd.hh [code]
	O2M_MutateMover forward declarations header.
file	O2M_MutateMover.hh [code]
	Mover that takes a starting structure and some task ops, and produces every single possible point mutation DOES NOT WORK WITH ROSETTASCRIPTS.
file	PackRotamersMover.cc [code]
file	PackRotamersMover.fwd.hh [code]
file	PackRotamersMover.hh [code]
file	PackRotamersMoverCreator.hh [code]
file	PackRotamersMoverLazy.cc [code]
file	PackRotamersMoverLazy.fwd.hh [code]
file	PackRotamersMoverLazy.hh [code]
file	PackRotamersMoverLazyCreator.hh [code]
file	PDBReloadMover.cc [code]
file	PDBReloadMover.fwd.hh [code]
	PDBReloadMover forward declarations header.
file	PDBReloadMover.hh [code]
file	PDBReloadMoverCreator.hh [code]
file	PeptideStapleMover.cc [code]
	Peptide Staples are covalent links between i/i+[4,7] residues in a helix. Applying a PeptideStapleMover creates one of these links.
file	PeptideStapleMover.fwd.hh [code]
file	PeptideStapleMover.hh [code]
	Definition of classes for placing peptide staples in the pose.
file	ProlineFixMover.cc [code]
file	ProlineFixMover.fwd.hh [code]
file	ProlineFixMover.hh [code]
file	RepackSidechainsMover.cc [code]
file	RepackSidechainsMover.fwd.hh [code]
file	RepackSidechainsMover.hh [code]
file	RepackSidechainsMoverCreator.hh [code]
file	RepulsiveOnlyMover.cc [code]
	calculate repulsive energy only for certain residues
file	RepulsiveOnlyMover.fwd.hh [code]
file	RepulsiveOnlyMover.hh [code]
file	ReturnSidechainMover.cc [code]
	ReturnSidechainMover methods implemented.
file	ReturnSidechainMover.fwd.hh [code]
	ReturnSidechainMover forward declarations header.
file	ReturnSidechainMover.hh [code]
	protocols::moves::Mover to "return" proper sidechains to a pose that was temporarily in centroid mode (can be used for any sidechain copying)
file	RotamerTrialsMinMover.cc [code]
	protocols::moves::Mover for Rotamer-Trials with Minimization (based on RotamerTrialsMover)
file	RotamerTrialsMinMover.fwd.hh [code]
file	RotamerTrialsMinMover.hh [code]
	Wrapper mover for Rotamer-Trials with Minimization (based on RotamerTrialsMover)
file	RotamerTrialsMinMoverCreator.hh [code]
	This class will create instances of RotamerTrialsMinMover for the protocols::moves::MoverFactory.
file	RotamerTrialsMover.cc [code]
file	RotamerTrialsMover.fwd.hh [code]
file	RotamerTrialsMover.hh [code]
file	RotamerTrialsMoverCreator.hh [code]
	This class will create instances of protocols::moves::Mover SidechainMCMover for the protocols::moves::MoverFactory.
file	SaneMinMover.cc [code]
file	SaneMinMover.fwd.hh [code]
file	SaneMinMover.hh [code]
file	SaneMinMoverCreator.hh [code]
file	ScoreMover.cc [code]
file	ScoreMover.fwd.hh [code]
	ScoreMover forward declarations header.
file	ScoreMover.hh [code]
file	ScoreMoverCreator.hh [code]
file	SequenceProfileMover.cc [code]
	moverization of code that was embedded in the parser
file	SequenceProfileMover.fwd.hh [code]
file	SequenceProfileMover.hh [code]
	BS mover to get around a stupid "mover" that was embedded in the parser.
file	SequenceProfileMoverCreator.hh [code]
file	SetReturningPackRotamersMover.cc [code]
	A pack mover which returns not just the best packer solution, but all nloop solutions.
file	SetReturningPackRotamersMover.fwd.hh [code]
file	SetReturningPackRotamersMover.hh [code]
	A PackRotamers mover which returns a set of packed poses for when ndruns/nloop is in use.
file	SetTorsion.cc [code]
file	SetTorsion.fwd.hh [code]
file	SetTorsion.hh [code]
file	SetTorsionCreator.hh [code]
file	ShakeStructureMover.cc [code]
file	ShakeStructureMover.fwd.hh [code]
file	ShakeStructureMover.hh [code]
file	SmoothFragmentMover.cc [code]
file	SmoothFragmentMover.fwd.hh [code]
file	SmoothFragmentMover.hh [code]
file	SuperimposeMover.cc [code]
file	SuperimposeMover.fwd.hh [code]
	SuperimposeMover forward declarations header.
file	SuperimposeMover.hh [code]
file	SuperimposeMoverCreator.hh [code]
file	SwitchChainOrderMover.cc [code]
file	SwitchChainOrderMover.fwd.hh [code]
	switch the chain order
file	SwitchChainOrderMover.hh [code]
	switch the chain order
file	SwitchChainOrderMoverCreator.hh [code]
file	SwitchResidueTypeSetMover.cc [code]
	switch between residue type sets (e.g. centroid and all atom)
file	SwitchResidueTypeSetMover.fwd.hh [code]
	switch between residue type sets (e.g. centroid and all atom)
file	SwitchResidueTypeSetMover.hh [code]
	switch between residue type sets (e.g. centroid and all atom)
file	SwitchResidueTypeSetMoverCreator.hh [code]
file	SymmetricFragmentMover.cc [code]
file	SymmetricFragmentMover.fwd.hh [code]
file	SymmetricFragmentMover.hh [code]
file	TailsScoreMover.cc [code]
file	TailsScoreMover.hh [code]
file	TaskAwareMinMover.cc [code]
	TaskAwareMinMover methods implemented.
file	TaskAwareMinMover.fwd.hh [code]
	TaskAwareMinMover forward declarations header.
file	TaskAwareMinMover.hh [code]
	MinMover which updates MoveMap to mirror PackerTask.
file	TaskAwareMinMoverCreator.hh [code]
file	TorsionDOFMover.cc [code]
	TorsionDOFMover methods implemented.
file	TorsionDOFMover.fwd.hh [code]
	TorsionDOFMover forward declarations header.
file	TorsionDOFMover.hh [code]
	TorsionDOFMover header.
file	WobbleMover.cc [code]
file	WobbleMover.hh [code]