Here is a list of all class members with links to the classes they belong to:
- ~ -
- ~_BoolMover()
: protocols::moves::_BoolMover
- ~AACompositionEnergy()
: protocols::fldsgn::potentials::AACompositionEnergy
- ~ABEGO()
: core::util::ABEGO
- ~ABEGO_SS_Map()
: protocols::frag_picker::quota::ABEGO_SS_Map
- ~ABEGO_SS_Pool()
: protocols::frag_picker::quota::ABEGO_SS_Pool
- ~ABEGO_SS_Score()
: protocols::frag_picker::scores::ABEGO_SS_Score
- ~ABEGOEval()
: core::fragment::picking_old::vall::eval::ABEGOEval
- ~ABEGOManager()
: core::util::ABEGOManager
- ~AbinitioBaseFilter()
: protocols::simple_filters::AbinitioBaseFilter
- ~AbinitioMoverWeight()
: protocols::topology_broker::weights::AbinitioMoverWeight
- ~AbrelaxApplication()
: protocols::abinitio::AbrelaxApplication
- ~AbrelaxMover()
: protocols::abinitio::AbrelaxMover
- ~AbstractArchiveBase()
: protocols::jd2::archive::AbstractArchiveBase
- ~AbstractRotamerTrie()
: core::conformation::AbstractRotamerTrie
- ~ActiveSiteGrid()
: protocols::match::downstream::ActiveSiteGrid
- ~AdaptiveScoreHistogram()
: protocols::frag_picker::scores::AdaptiveScoreHistogram
- ~AddAllPositionsMPM()
: protocols::match::AddAllPositionsMPM
- ~AddBehaviorRLT()
: core::pack::task::operation::AddBehaviorRLT
- ~AddChainBreak()
: protocols::protein_interface_design::movers::AddChainBreak
- ~AddConstraintsToCurrentConformationMover()
: protocols::simple_moves::AddConstraintsToCurrentConformationMover
- ~AddHydrogen()
: protocols::ligand_docking::AddHydrogen
- ~AddHydrogens()
: protocols::ligand_docking::AddHydrogens
- ~AdditionalBackgroundNodesInteractionGraph()
: core::pack::interaction_graph::AdditionalBackgroundNodesInteractionGraph< V, E, G >
- ~AddLigandMotifRotamers()
: protocols::enzdes::AddLigandMotifRotamers
- ~AddOrRemoveMatchCsts()
: protocols::enzdes::AddOrRemoveMatchCsts
- ~AddRigidBodyLigandConfs()
: protocols::enzdes::AddRigidBodyLigandConfs
- ~AddSearchPatternRotSetOp()
: protocols::hotspot_hashing::AddSearchPatternRotSetOp
- ~AddSidechainConstraintsToHotspots()
: protocols::protein_interface_design::movers::AddSidechainConstraintsToHotspots
- ~AlaScan()
: protocols::simple_filters::AlaScan
- ~Align_RmsdEvaluator()
: protocols::comparative_modeling::Align_RmsdEvaluator
- ~Align_RotamerEvaluator()
: protocols::comparative_modeling::Align_RotamerEvaluator
- ~Aligner()
: core::sequence::Aligner
- ~AlignEvaluator()
: protocols::evaluation::AlignEvaluator
- ~AlignmentCluster()
: protocols::comparative_modeling::AlignmentCluster
- ~AlignmentClustering()
: protocols::comparative_modeling::AlignmentClustering
- ~AlignmentSet()
: protocols::comparative_modeling::AlignmentSet
- ~AlignPoseToInvrotTreeMover()
: protocols::toolbox::match_enzdes_util::AlignPoseToInvrotTreeMover
- ~AlignRmsdTargetEvaluatorCreator()
: protocols::comparative_modeling::AlignRmsdTargetEvaluatorCreator
- ~AllowedSeqposForGeomCst()
: protocols::toolbox::match_enzdes_util::AllowedSeqposForGeomCst
- ~AllowInsert()
: protocols::toolbox::AllowInsert
- ~AlterSpecDisruptionDriver()
: protocols::pmut_scan::AlterSpecDisruptionDriver
- ~AmbiguousConstraintCreator()
: core::scoring::constraints::AmbiguousConstraintCreator
- ~AmbiguousNMRConstraintCreator()
: core::scoring::constraints::AmbiguousNMRConstraintCreator
- ~AmbiguousNMRDistanceConstraintCreator()
: core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator
- ~AnalyticEtableEvaluator()
: core::scoring::etable::AnalyticEtableEvaluator
- ~Anchor()
: protocols::anchored_design::Anchor
- ~AnchoredDesignMover()
: protocols::anchored_design::AnchoredDesignMover
- ~AnchoredGraftMover()
: protocols::grafting::AnchoredGraftMover
- ~AnchoredPerturbMover()
: protocols::anchored_design::AnchoredPerturbMover
- ~AnchoredRefineMover()
: protocols::anchored_design::AnchoredRefineMover
- ~AnchorMoversData()
: protocols::anchored_design::AnchorMoversData
- ~AngleConstraintCreator()
: core::scoring::constraints::AngleConstraintCreator
- ~AntibodyModeler()
: protocols::antibody::AntibodyModeler
- ~AntibodyModelerProtocol()
: protocols::antibody2::AntibodyModelerProtocol
- ~APBSConfig()
: core::scoring::APBSConfig
- ~APBSResult()
: core::scoring::APBSResult
- ~APBSWrapper()
: core::scoring::APBSWrapper
- ~APCluster()
: protocols::cluster::APCluster
- ~AppendResidueRotamerSet()
: core::pack::task::operation::AppendResidueRotamerSet
- ~AppendRotamer()
: core::pack::task::operation::AppendRotamer
- ~AppendRotamerSet()
: core::pack::task::operation::AppendRotamerSet
- ~ApplyRandomStoredRBConf()
: protocols::enzdes::ApplyRandomStoredRBConf
- ~ArchiveBase()
: protocols::jd2::archive::ArchiveBase
- ~ArchiveManager()
: protocols::jd2::archive::ArchiveManager
- ~Array0()
: core::graph::Array0< T >
- ~Array2D()
: core::scoring::packstat::Array2D
- ~ArrayPool()
: core::graph::ArrayPool< T >
- ~ArrayPoolElement()
: core::graph::ArrayPoolElement< T >
- ~AsymFoldandDockMoveRbJumpMover()
: protocols::simple_moves::asym_fold_and_dock::AsymFoldandDockMoveRbJumpMover
- ~AsymFoldandDockRbTrialMover()
: protocols::simple_moves::asym_fold_and_dock::AsymFoldandDockRbTrialMover
- ~Atom()
: core::conformation::Atom
, core::kinematics::tree::Atom
, core::scoring::sc::Atom
- ~Atom_()
: core::kinematics::tree::Atom_
- ~AtomAtomPairFeatures()
: protocols::features::AtomAtomPairFeatures
- ~AtomAtomPairFeaturesCreator()
: protocols::features::AtomAtomPairFeaturesCreator
- ~AtomCountFilter()
: protocols::ligand_docking::AtomCountFilter
- ~AtomGeometrySecMatchRPE()
: protocols::match::downstream::AtomGeometrySecMatchRPE
- ~AtomicContactCountFilter()
: protocols::protein_interface_design::filters::AtomicContactCountFilter
- ~AtomicContactFilter()
: protocols::simple_filters::AtomicContactFilter
- ~AtomicDistanceFilter()
: protocols::simple_filters::AtomicDistanceFilter
- ~AtomID_Map()
: core::id::AtomID_Map< T >
- ~AtomInResidueAtomInResiduePairFeatures()
: protocols::features::AtomInResidueAtomInResiduePairFeatures
- ~AtomInResidueAtomInResiduePairFeaturesCreator()
: protocols::features::AtomInResidueAtomInResiduePairFeaturesCreator
- ~AtomPairConstraintCreator()
: core::scoring::constraints::AtomPairConstraintCreator
- ~AtomPairConstraintsData()
: protocols::frag_picker::scores::AtomPairConstraintsData
- ~AtomPairFuncList()
: core::scoring::custom_pair_distance::AtomPairFuncList
- ~AtomRadiusMap()
: core::scoring::packstat::AtomRadiusMap
- ~AtomTree()
: core::kinematics::AtomTree
- ~AtomTreeCollection()
: core::pack::scmin::AtomTreeCollection
- ~AtomTreeDiff()
: core::import_pose::atom_tree_diffs::AtomTreeDiff
- ~AtomTreeDiffJobDistributor()
: protocols::jobdist::AtomTreeDiffJobDistributor
- ~AtomTreeDiffJobInputter()
: protocols::jd2::AtomTreeDiffJobInputter
- ~AtomTreeDiffJobOutputter()
: protocols::jd2::AtomTreeDiffJobOutputter
- ~AtomTreeMinimizer()
: core::optimization::AtomTreeMinimizer
- ~AtomTreeMultifunc()
: core::optimization::AtomTreeMultifunc
- ~AtomTreeSCMinMinimizerMap()
: core::pack::scmin::AtomTreeSCMinMinimizerMap
- ~AtomTypeDatabaseIO()
: core::chemical::AtomTypeDatabaseIO
- ~AtomTypeSet()
: core::chemical::AtomTypeSet
- ~AtomTypesFeatures()
: protocols::features::AtomTypesFeatures
- ~AtomTypesFeaturesCreator()
: protocols::features::AtomTypesFeaturesCreator
- ~AutomorphismIterator()
: core::chemical::AutomorphismIterator
- ~AverageDegreeFilter()
: protocols::protein_interface_design::filters::AverageDegreeFilter
- ~BackboneMover()
: protocols::simple_moves::BackboneMover
- ~BackboneSampler()
: protocols::enzdes::BackboneSampler
- ~BackboneStubConstraint()
: core::scoring::constraints::BackboneStubConstraint
- ~BackgroundNode()
: core::pack::interaction_graph::BackgroundNode< V, E, G >
- ~BackgroundToFirstClassEdge()
: core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G >
- ~BackrubDDMover()
: protocols::protein_interface_design::movers::BackrubDDMover
- ~BackrubSidechainMover()
: protocols::backrub::BackrubSidechainMover
- ~BaseDisulfPairingLibrary()
: protocols::jumping::BaseDisulfPairingLibrary
- ~BaseJobDistributor()
: protocols::jobdist::BaseJobDistributor
- ~BaseJumpSetup()
: protocols::jumping::BaseJumpSetup
- ~BasePairingLibrary()
: protocols::jumping::BasePairingLibrary
- ~BasicJob()
: protocols::jobdist::BasicJob
- ~BasicSimAnnealerRepacker()
: protocols::pack_daemon::BasicSimAnnealerRepacker
- ~BatchFeatures()
: protocols::features::BatchFeatures
- ~BatchFeaturesCreator()
: protocols::features::BatchFeaturesCreator
- ~BatchJobInputter()
: protocols::jd2::BatchJobInputter
- ~BB_BB_EnergyInvoker()
: core::scoring::etable::BB_BB_EnergyInvoker< Evaluator >
- ~BBConRotMover()
: protocols::simple_moves::BBConRotMover
- ~BBDepSemiRotamericData()
: core::pack::dunbrack::BBDepSemiRotamericData< T >
- ~BBDofs()
: protocols::protein_interface_design::movers::BBDofs
- ~BBG8T3AMover()
: protocols::simple_moves::BBG8T3AMover
- ~BBGaussianMover()
: protocols::simple_moves::BBGaussianMover
- ~BBIndSemiRotamericData()
: core::pack::dunbrack::BBIndSemiRotamericData< T >
- ~BDR()
: protocols::forge::components::BDR
- ~BDRSegmentInfo()
: protocols::forge::components::BDRSegmentInfo
- ~BestHotspotCstMover()
: protocols::protein_interface_design::movers::BestHotspotCstMover
- ~BestMatchesCollection()
: protocols::match::output::BestMatchesCollection
- ~BestTotalScoreSelector()
: protocols::frag_picker::BestTotalScoreSelector
- ~BetaAlphaBetaMotif()
: protocols::fldsgn::topology::BetaAlphaBetaMotif
- ~BetaAlphaBetaMotifSet()
: protocols::fldsgn::topology::BetaAlphaBetaMotifSet
- ~BetaTurnDetectionFeatures()
: protocols::features::BetaTurnDetectionFeatures
- ~BetaTurnDetectionFeaturesCreator()
: protocols::features::BetaTurnDetectionFeaturesCreator
- ~BfactorMPM()
: protocols::match::BfactorMPM
- ~BiasedFragmentMover()
: protocols::nonlocal::BiasedFragmentMover
- ~BigBinConstraintCreator()
: core::scoring::constraints::BigBinConstraintCreator
- ~BinaryProteinSilentStruct()
: core::io::silent::BinaryProteinSilentStruct
- ~BinaryProteinSilentStructCreator()
: core::io::silent::BinaryProteinSilentStructCreator
- ~BinaryRNASilentStruct()
: core::io::silent::BinaryRNASilentStruct
- ~BinaryRNASilentStructCreator()
: core::io::silent::BinaryRNASilentStructCreator
- ~BindingSiteConstraintCreator()
: protocols::constraints_additional::BindingSiteConstraintCreator
- ~BindingStrainFilter()
: protocols::protein_interface_design::filters::BindingStrainFilter
- ~BluePrint()
: protocols::jd2::parser::BluePrint
- ~BluePrintBDR()
: protocols::fldsgn::BluePrintBDR
- ~BoincCurrentPoseObserver()
: protocols::boinc::BoincCurrentPoseObserver
- ~BOINCJobDistributor()
: protocols::jd2::BOINCJobDistributor
- ~BoltzmannFilter()
: protocols::protein_interface_design::filters::BoltzmannFilter
- ~Book()
: core::fragment::picking_old::concepts::Book< Pages >
- ~Bool3DGrid()
: protocols::match::Bool3DGrid
- ~Bool3DGridKinemageWriter()
: protocols::match::Bool3DGridKinemageWriter
- ~BoundedPriorityQueue()
: protocols::frag_picker::BoundedPriorityQueue< T, StrictWeakOrdering >
- ~BranchAngleOptimizer()
: protocols::branch_angle::BranchAngleOptimizer
- ~Bridge()
: protocols::forge::build::Bridge
- ~BUFFER()
: core::io::serialization::BUFFER
- ~BuildAlaPose()
: protocols::protein_interface_design::movers::BuildAlaPose
- ~BuildInstruction()
: protocols::forge::build::BuildInstruction
- ~BuildManager()
: protocols::forge::build::BuildManager
- ~BuildPosition()
: protocols::motifs::BuildPosition
- ~BuildSet()
: protocols::match::upstream::BuildSet
- ~BumpGrid()
: protocols::match::BumpGrid
- ~BuriedPolarScore()
: protocols::sic_dock::BuriedPolarScore
- ~BuriedUnsatHbondFilter()
: protocols::simple_filters::BuriedUnsatHbondFilter
- ~CaCbCb_Angle_Func()
: core::scoring::disulfides::CaCbCb_Angle_Func
- ~CaCbCbCa_Dihedral_Func()
: core::scoring::disulfides::CaCbCbCa_Dihedral_Func
- ~CacheableAtomID_MapVector()
: core::id::CacheableAtomID_MapVector
- ~CacheableObserver()
: core::pose::datacache::CacheableObserver
- ~CacheablePoseRawPtr()
: core::pose::datacache::CacheablePoseRawPtr
- ~CacheableSequenceProfile()
: core::sequence::CacheableSequenceProfile
- ~CacheWrapper()
: core::fragment::CacheWrapper< T, XCacheUnit >
- ~CAcstGenerator()
: protocols::seeded_abinitio::CAcstGenerator
- ~CalculatorFilter()
: protocols::filters::CalculatorFilter
- ~CamShiftEvaluatorCreator()
: protocols::simple_filters::CamShiftEvaluatorCreator
- ~CarbohydrateInfo()
: core::chemical::carbohydrates::CarbohydrateInfo
- ~CartesianBondedEnergy()
: core::scoring::methods::CartesianBondedEnergy
- ~CartesianMinimizer()
: core::optimization::CartesianMinimizer
- ~CartesianMinimizerMap()
: core::optimization::CartesianMinimizerMap
- ~CartesianMultifunc()
: core::optimization::CartesianMultifunc
- ~CartGrid()
: core::grid::CartGrid< T >
- ~CartSCMinMinimizerMap()
: core::pack::scmin::CartSCMinMinimizerMap
- ~CartSCMinMultifunc()
: core::pack::scmin::CartSCMinMultifunc
- ~CB_Angle_Func()
: core::scoring::disulfides::CB_Angle_Func
- ~Cb_Distance_Func()
: core::scoring::disulfides::Cb_Distance_Func
- ~CBScore()
: protocols::sic_dock::CBScore
- ~CBSG_Dihedral_Func()
: core::scoring::disulfides::CBSG_Dihedral_Func
- ~CcdLoopClosureMover()
: protocols::loops::loop_closure::ccd::CcdLoopClosureMover
- ~CcdMover()
: protocols::loops::loop_closure::ccd::CcdMover
- ~CDRH3Modeler()
: protocols::antibody::CDRH3Modeler
- ~CDRsMinPackMin()
: protocols::antibody2::CDRsMinPackMin
- ~Cell()
: core::sequence::Cell
- ~Cen_Distance_Func()
: core::scoring::disulfides::Cen_Distance_Func
- ~CentroidDisulfideEnergy()
: core::scoring::disulfides::CentroidDisulfideEnergy
- ~CentroidDisulfideEnergyContainer()
: core::scoring::disulfides::CentroidDisulfideEnergyContainer
- ~CentroidDisulfideNeighborConstIterator()
: core::scoring::disulfides::CentroidDisulfideNeighborConstIterator
- ~CentroidDisulfideNeighborIterator()
: core::scoring::disulfides::CentroidDisulfideNeighborIterator
- ~CentroidDisulfidePotential()
: core::scoring::disulfides::CentroidDisulfidePotential
- ~CentroidRelax()
: protocols::relax::CentroidRelax
- ~CentroidRelaxMover()
: protocols::surface_docking::CentroidRelaxMover
- ~ChainExistsFilter()
: protocols::ligand_docking::ChainExistsFilter
- ~ChainGroupDiscriminator()
: protocols::simple_moves::ChainGroupDiscriminator
- ~ChargeCalculator()
: protocols::toolbox::pose_metric_calculators::ChargeCalculator
- ~ChargeChargeFeatures()
: protocols::features::ChargeChargeFeatures
- ~ChargeChargeFeaturesCreator()
: protocols::features::ChargeChargeFeaturesCreator
- ~CheckPointer()
: protocols::checkpoint::CheckPointer
- ~ChemicalShiftAnisotropy()
: core::scoring::ChemicalShiftAnisotropy
- ~ChemicalShiftData()
: core::scoring::rna::chemical_shift::ChemicalShiftData
- ~ChemicalShiftEvaluatorCreator()
: protocols::sparta::ChemicalShiftEvaluatorCreator
- ~ChemicalShiftScoringScheme()
: core::sequence::ChemicalShiftScoringScheme
- ~ChemicalShiftSequence()
: core::sequence::ChemicalShiftSequence
- ~ChemicalShiftSequenceCreator()
: core::sequence::ChemicalShiftSequenceCreator
- ~ChiralMover()
: protocols::simple_moves::chiral::ChiralMover
- ~ChiWellRmsdEvaluatorCreator()
: protocols::simple_filters::ChiWellRmsdEvaluatorCreator
- ~Chunk()
: protocols::nonlocal::Chunk
- ~ChunkSet()
: protocols::rna::ChunkSet
- ~CircularPermutation()
: protocols::fldsgn::CircularPermutation
- ~ClaimerMessage()
: protocols::topology_broker::ClaimerMessage
- ~ClassicAbinitio()
: protocols::abinitio::ClassicAbinitio
- ~ClassicFragmentMover()
: protocols::simple_moves::ClassicFragmentMover
- ~ClassicMatchAlgorithm()
: protocols::match::downstream::ClassicMatchAlgorithm
- ~ClassicRelax()
: protocols::relax::ClassicRelax
- ~ClearConstraintsMover()
: protocols::simple_moves::ClearConstraintsMover
- ~CloseFold()
: protocols::seeded_abinitio::CloseFold
- ~CloseOneCDRLoop()
: protocols::antibody2::CloseOneCDRLoop
- ~CloudPDBWriter()
: protocols::match::output::CloudPDBWriter
- ~Cluster_Member()
: protocols::swa::rna::Cluster_Member
- ~ClusterPhilStyle()
: protocols::cluster::ClusterPhilStyle
- ~ClusterPhilStyle_Loop()
: protocols::cluster::ClusterPhilStyle_Loop
- ~CoarseRNA_DeNovoProtocol()
: protocols::coarse_rna::CoarseRNA_DeNovoProtocol
- ~CoarseRNA_Fragments()
: protocols::coarse_rna::CoarseRNA_Fragments
- ~CoarseSingleResidueLibrary()
: core::pack::dunbrack::CoarseSingleResidueLibrary
- ~COFilter()
: protocols::simple_filters::COFilter
- ~Combine_Tags_Info()
: protocols::swa::rna::Combine_Tags_Info
- ~CombinedConstraintEvaluatorCreator()
: protocols::constraints_additional::CombinedConstraintEvaluatorCreator
- ~CombinedFilter()
: protocols::filters::CombinedFilter
- ~CompareByScoreCombination()
: protocols::frag_picker::CompareByScoreCombination
- ~CompareTotalScore()
: protocols::frag_picker::CompareTotalScore
- ~CompassScoringScheme()
: core::sequence::CompassScoringScheme
- ~CompleteConnectionsFilter()
: protocols::ligand_docking::CompleteConnectionsFilter
- ~CompositeFragmentSelector()
: protocols::frag_picker::CompositeFragmentSelector
- ~CompositeScoringScheme()
: core::sequence::CompositeScoringScheme
- ~CompositeSequence()
: core::sequence::CompositeSequence
- ~CompositeSequenceCreator()
: core::sequence::CompositeSequenceCreator
- ~CompoundFilter()
: protocols::filters::CompoundFilter
- ~CompoundTranslate()
: protocols::ligand_docking::CompoundTranslate
- ~ConcurrencyTestCreator()
: protocols::features::helixAssembly::ConcurrencyTestCreator
- ~Conformation()
: core::conformation::Conformation
- ~ConformationEvent()
: core::pose::signals::ConformationEvent
- ~ConformationKinWriter()
: core::conformation::ConformationKinWriter
- ~ConformationViewer()
: protocols::viewer::ConformationViewer
- ~ConformationXYZ()
: core::scoring::constraints::ConformationXYZ
- ~ConnectionEvent()
: core::conformation::signals::ConnectionEvent
- ~ConnectRight()
: protocols::forge::build::ConnectRight
- ~ConsensusDesignMover()
: protocols::simple_moves::ConsensusDesignMover
- ~ConservedPosMutationFilter()
: protocols::simple_filters::ConservedPosMutationFilter
- ~const_iterator()
: core::io::raw_data::RawFileData::const_iterator
, core::io::silent::SilentFileData::const_iterator
- ~ConstantConstraint()
: core::scoring::constraints::ConstantConstraint
- ~ConstantLengthFragSet()
: core::fragment::ConstantLengthFragSet
- ~Constraint()
: core::scoring::constraints::Constraint
- ~ConstraintCreator()
: core::scoring::constraints::ConstraintCreator
- ~ConstraintEdge()
: core::scoring::constraints::ConstraintEdge
- ~ConstraintedOptimizationWeightFunc()
: protocols::optimize_weights::ConstraintedOptimizationWeightFunc
- ~ConstraintEvaluatorCreator()
: protocols::constraints_additional::ConstraintEvaluatorCreator
- ~ConstraintEvaluatorWrapperCreator()
: protocols::topology_broker::ConstraintEvaluatorWrapperCreator
- ~ConstraintFileRCG()
: protocols::forge::constraints::ConstraintFileRCG
- ~ConstraintGraph()
: core::scoring::constraints::ConstraintGraph
- ~ConstraintNode()
: core::scoring::constraints::ConstraintNode
- ~ConstrainToIdealMover()
: protocols::simple_moves::ConstrainToIdealMover
- ~Constraints()
: core::scoring::constraints::Constraints
- ~ConstraintsEnergy()
: core::scoring::constraints::ConstraintsEnergy
- ~ConstraintSet()
: core::scoring::constraints::ConstraintSet
- ~ConstraintSetMover()
: protocols::simple_moves::ConstraintSetMover
- ~Contact()
: protocols::frag_picker::Contact
- ~ContactCounts()
: protocols::frag_picker::ContactCounts
- ~ContactMap()
: protocols::contact_map::ContactMap
- ~ContactMapEvaluator()
: protocols::simple_filters::ContactMapEvaluator
- ~ContactMapEvaluatorCreator()
: protocols::simple_filters::ContactMapEvaluatorCreator
- ~ContextDependentLRTwoBodyEnergy()
: core::scoring::methods::ContextDependentLRTwoBodyEnergy
- ~ContextDependentTwoBodyEnergy()
: core::scoring::methods::ContextDependentTwoBodyEnergy
- ~ContextGraph()
: core::scoring::ContextGraph
- ~ContextIndependentLRTwoBodyEnergy()
: core::scoring::methods::ContextIndependentLRTwoBodyEnergy
- ~ContextIndependentTwoBodyEnergy()
: core::scoring::methods::ContextIndependentTwoBodyEnergy
- ~ContingentFilter()
: protocols::filters::ContingentFilter
- ~ContinuousRotamerSet()
: core::pack::rotamer_set::ContinuousRotamerSet
- ~ContinuousRotamerSets()
: core::pack::rotamer_set::ContinuousRotamerSets
- ~ConvergenceTest()
: core::optimization::ConvergenceTest
- ~CoordConstraintClaimer()
: protocols::topology_broker::CoordConstraintClaimer
- ~CoordinateConstraint()
: core::scoring::constraints::CoordinateConstraint
- ~CoordinateConstraintCreator()
: core::scoring::constraints::CoordinateConstraintCreator
- ~CoordinateCst()
: protocols::seeded_abinitio::CoordinateCst
- ~CoreDunbrackFilter()
: protocols::fldsgn::filters::CoreDunbrackFilter
- ~CountPair1B()
: core::scoring::etable::count_pair::CountPair1B< CrossoverBehavior >
- ~CountPairAll()
: core::scoring::etable::count_pair::CountPairAll
- ~CountPairCrossover3()
: core::scoring::etable::count_pair::CountPairCrossover3
- ~CountPairCrossover4()
: core::scoring::etable::count_pair::CountPairCrossover4
- ~CountPairFunction()
: core::scoring::etable::count_pair::CountPairFunction
- ~CountPairGeneric()
: core::scoring::etable::count_pair::CountPairGeneric
- ~CountPairIntraRes()
: core::scoring::etable::count_pair::CountPairIntraRes< CrossoverBehavior >
- ~CountPairIntraResC3()
: core::scoring::etable::count_pair::CountPairIntraResC3
- ~CountPairIntraResC4()
: core::scoring::etable::count_pair::CountPairIntraResC4
- ~CountPairNone()
: core::scoring::etable::count_pair::CountPairNone
- ~CountViolFunc()
: core::scoring::constraints::CountViolFunc
- ~CovalentConnectionReplaceInfo()
: protocols::toolbox::match_enzdes_util::CovalentConnectionReplaceInfo
- ~CrossPeak()
: protocols::noesy_assign::CrossPeak
- ~CrossPeak3D()
: protocols::noesy_assign::CrossPeak3D
- ~CrossPeak4D()
: protocols::noesy_assign::CrossPeak4D
- ~CrossPeakInfo()
: protocols::noesy_assign::CrossPeakInfo
- ~CrossPeakList()
: protocols::noesy_assign::CrossPeakList
- ~CSD_TorsionEnergy()
: core::scoring::methods::CSD_TorsionEnergy
- ~CSDAtomTypeSet()
: core::chemical::CSDAtomTypeSet
- ~CstEnergyContainer()
: core::scoring::constraints::CstEnergyContainer
- ~CstMinimizationData()
: core::scoring::constraints::CstMinimizationData
- ~CstResInteractions()
: protocols::toolbox::match_enzdes_util::CstResInteractions
- ~CstResNeighbConstIterator()
: core::scoring::constraints::CstResNeighbConstIterator
- ~CstResNeighbIterator()
: core::scoring::constraints::CstResNeighbIterator
- ~CtabBase()
: core::chemical::sdf::CtabBase
- ~CustomScoreSelector()
: protocols::frag_picker::CustomScoreSelector
- ~CutChainMover()
: protocols::simple_moves::CutChainMover
- ~DaemonSet()
: protocols::pack_daemon::DaemonSet
- ~DarcParticleSwarmMinimizer()
: protocols::pockets::DarcParticleSwarmMinimizer
- ~DatabaseEntryWorkUnit()
: protocols::wum::DatabaseEntryWorkUnit
- ~DatabaseFilter()
: protocols::features::DatabaseFilter
- ~DatabaseJobInputter()
: protocols::features::DatabaseJobInputter
- ~DatabaseJobOutputter()
: protocols::features::DatabaseJobOutputter
- ~DatabaseQueryWorkUnitManager()
: protocols::wum::DatabaseQueryWorkUnitManager< T >
- ~DataBuffer()
: protocols::canonical_sampling::mc_convergence_checks::DataBuffer
- ~DataLoader()
: protocols::jd2::parser::DataLoader
- ~DataLoaderCreator()
: protocols::jd2::parser::DataLoaderCreator
- ~DataLoaderFactory()
: protocols::jd2::parser::DataLoaderFactory
- ~DataMap()
: protocols::moves::DataMap
- ~DataPoint()
: protocols::cluster::DataPoint
- ~ddG()
: protocols::simple_moves::ddG
- ~DDGBindOptEData()
: protocols::optimize_weights::DDGBindOptEData
- ~DdgFilter()
: protocols::simple_filters::DdgFilter
- ~ddGMover()
: protocols::ddg::ddGMover
- ~DDGMutationOptEData()
: protocols::optimize_weights::DDGMutationOptEData
- ~DebuggingAnnealer()
: core::pack::annealer::DebuggingAnnealer
- ~DecoySetEvaluation()
: protocols::toolbox::DecoySetEvaluation
- ~DecoyStruct()
: core::io::raw_data::DecoyStruct
- ~DefineMovableLoops()
: protocols::seeded_abinitio::DefineMovableLoops
- ~DeltaFilter()
: protocols::simple_filters::DeltaFilter
- ~DenseEnergyContainer()
: core::scoring::DenseEnergyContainer
- ~DenseIGRepacker()
: protocols::pack_daemon::DenseIGRepacker
- ~DenseNeighborConstIterator()
: core::scoring::DenseNeighborConstIterator
- ~DenseNeighborIterator()
: core::scoring::DenseNeighborIterator
- ~DensePDEdge()
: core::pack::interaction_graph::DensePDEdge
- ~DensePDNode()
: core::pack::interaction_graph::DensePDNode
- ~DerivedSequenceMapping()
: core::sequence::DerivedSequenceMapping
- ~DesignableResiduesFilter()
: protocols::protein_interface_design::filters::DesignableResiduesFilter
- ~DesignAroundOperation()
: protocols::toolbox::task_operations::DesignAroundOperation
- ~DesignContrast()
: core::io::sequence_comparation::DesignContrast
- ~DesignMinimizeHbonds()
: protocols::protein_interface_design::movers::DesignMinimizeHbonds
- ~DesignProteinBackboneAroundDNA()
: protocols::dna::DesignProteinBackboneAroundDNA
- ~DesignRepackMover()
: protocols::simple_moves::DesignRepackMover
- ~DesignTask()
: protocols::flxbb::DesignTask
- ~DesignTask_Layer()
: protocols::flxbb::DesignTask_Layer
- ~DesignTask_Normal()
: protocols::flxbb::DesignTask_Normal
- ~DesignVsNativeComparison()
: protocols::enzdes::DesignVsNativeComparison
- ~DestructionEvent()
: core::pose::signals::DestructionEvent
- ~DetectProteinLigandInterface()
: protocols::enzdes::DetectProteinLigandInterface
- ~DFIRE_Potential()
: core::scoring::methods::dfire::DFIRE_Potential
- ~DFPMinConvergedAbsolute()
: core::optimization::DFPMinConvergedAbsolute
- ~DFPMinConvergedFractional()
: core::optimization::DFPMinConvergedFractional
- ~DGBindOptEData()
: protocols::optimize_weights::DGBindOptEData
- ~DiffAtomSasaFilter()
: protocols::enzdes::DiffAtomSasaFilter
- ~DihedralConstraintCreator()
: core::scoring::constraints::DihedralConstraintCreator
- ~DihedralPairConstraintCreator()
: core::scoring::constraints::DihedralPairConstraintCreator
- ~DimerPairing()
: protocols::fldsgn::topology::DimerPairing
- ~DipolarCoupling()
: core::scoring::DipolarCoupling
- ~DisallowIfNonnative()
: core::pack::task::operation::DisallowIfNonnative
- ~DisallowIfNonnativeRLT()
: core::pack::task::operation::DisallowIfNonnativeRLT
- ~DiscreteRandomizer()
: protocols::genetic_algorithm::DiscreteRandomizer
- ~DistanceFunc()
: core::scoring::custom_pair_distance::DistanceFunc
- ~DisulfideFilter()
: protocols::protein_interface_design::filters::DisulfideFilter
- ~DisulfideMatchingDatabase()
: core::scoring::disulfides::DisulfideMatchingDatabase
- ~DisulfideMatchingEnergy()
: core::scoring::disulfides::DisulfideMatchingEnergy
- ~DisulfideMatchingEnergyContainer()
: core::scoring::disulfides::DisulfideMatchingEnergyContainer
- ~DisulfideMatchingNeighborConstIterator()
: core::scoring::disulfides::DisulfideMatchingNeighborConstIterator
- ~DisulfideMatchingNeighborIterator()
: core::scoring::disulfides::DisulfideMatchingNeighborIterator
- ~DisulfideMatchingPotential()
: core::scoring::disulfides::DisulfideMatchingPotential
- ~DisulfideMover()
: protocols::protein_interface_design::movers::DisulfideMover
- ~DisulfMinData()
: core::scoring::disulfides::DisulfMinData
- ~DisulfResNeighbConstIterator()
: core::scoring::disulfides::DisulfResNeighbConstIterator
- ~DisulfResNeighbIterator()
: core::scoring::disulfides::DisulfResNeighbIterator
- ~DiversifyCrmsdByClustering()
: protocols::frag_picker::DiversifyCrmsdByClustering
- ~DiversifyCrmsdSelector()
: protocols::frag_picker::DiversifyCrmsdSelector
- ~DiversifyDihedralsSelector()
: protocols::frag_picker::DiversifyDihedralsSelector
- ~DiversifyStoredRBConfs()
: protocols::enzdes::DiversifyStoredRBConfs
- ~DNA_BasePotential()
: core::scoring::dna::DNA_BasePotential
- ~DNABFormPotential()
: core::scoring::dna::DNABFormPotential
- ~DnaChains()
: protocols::dna::DnaChains
- ~DNAChiEnergy()
: core::scoring::dna::DNAChiEnergy
- ~DnaDesignDef()
: protocols::dna::DnaDesignDef
- ~DnaInterfaceFinder()
: protocols::dna::DnaInterfaceFinder
- ~DnaInterfaceMinMover()
: protocols::dna::DnaInterfaceMinMover
- ~DnaInterfaceMultiStateDesign()
: protocols::dna::DnaInterfaceMultiStateDesign
- ~DnaInterfacePacker()
: protocols::dna::DnaInterfacePacker
- ~DNAParameters()
: protocols::dna::DNAParameters
- ~DnaPosition()
: protocols::dna::DnaPosition
- ~DNATorsionPotential()
: core::scoring::dna::DNATorsionPotential
- ~DockAndRetrieveSidechains()
: protocols::protein_interface_design::movers::DockAndRetrieveSidechains
- ~DockDesignFilterFactory()
: protocols::protein_interface_design::DockDesignFilterFactory
- ~DockDesignParser()
: protocols::jd2::DockDesignParser
- ~DockingEnsemble()
: protocols::docking::DockingEnsemble
- ~DockingEnsemblePrepackProtocol()
: protocols::docking::DockingEnsemblePrepackProtocol
- ~DockingHighRes()
: protocols::docking::DockingHighRes
- ~DockingHighResFilter()
: protocols::docking::DockingHighResFilter
- ~DockingHighResLegacy()
: protocols::docking::DockingHighResLegacy
- ~DockingInitialPerturbation()
: protocols::docking::DockingInitialPerturbation
- ~DockingLowRes()
: protocols::docking::DockingLowRes
- ~DockingLowResEnsemble()
: protocols::docking::DockingLowResEnsemble
- ~DockingLowResFilter()
: protocols::docking::DockingLowResFilter
- ~DockingNoRepack1()
: core::pack::task::operation::DockingNoRepack1
, protocols::toolbox::task_operations::DockingNoRepack1
- ~DockingNoRepack2()
: core::pack::task::operation::DockingNoRepack2
, protocols::toolbox::task_operations::DockingNoRepack2
- ~DockingPrepackProtocol()
: protocols::docking::DockingPrepackProtocol
- ~DockingProtocol()
: protocols::docking::DockingProtocol
- ~DockingSlideIntoContact()
: protocols::docking::DockingSlideIntoContact
- ~DockMCMCycle()
: protocols::docking::DockMCMCycle
- ~DockMCMProtocol()
: protocols::docking::DockMCMProtocol
- ~DockMinMover()
: protocols::docking::DockMinMover
- ~DockTaskFactory()
: protocols::docking::DockTaskFactory
- ~DOF_Constraint()
: core::scoring::constraints::DOF_Constraint
- ~DOF_ID_Map()
: core::id::DOF_ID_Map< T >
- ~DofClaim()
: protocols::topology_broker::DofClaim
- ~DOFHistogramRecorder()
: protocols::simple_moves::DOFHistogramRecorder
- ~DomainAssembly()
: protocols::abinitio::DomainAssembly
- ~DotSphere()
: core::pack::interaction_graph::DotSphere
- ~DoubleDenseIGRepacker()
: protocols::pack_daemon::DoubleDenseIGRepacker
- ~DoubleDensePDEdge()
: core::pack::interaction_graph::DoubleDensePDEdge
- ~DoubleDensePDNode()
: core::pack::interaction_graph::DoubleDensePDNode
- ~DoubleLayerKinematicAbinitio()
: protocols::abinitio::DoubleLayerKinematicAbinitio
- ~DoubleLazyEdge()
: core::pack::interaction_graph::DoubleLazyEdge
- ~DoubleLazyInteractionGraph()
: core::pack::interaction_graph::DoubleLazyInteractionGraph
- ~DoubleLazyNode()
: core::pack::interaction_graph::DoubleLazyNode
- ~DownstreamAlgorithm()
: protocols::match::downstream::DownstreamAlgorithm
- ~DownstreamBuilder()
: protocols::match::downstream::DownstreamBuilder
- ~DownstreamCoordinateKinemageWriter()
: protocols::match::output::DownstreamCoordinateKinemageWriter
- ~DownstreamRMSEvaluator()
: protocols::match::output::DownstreamRMSEvaluator
- ~DP_Matrix()
: core::sequence::DP_Matrix
- ~DPScoringScheme()
: core::sequence::DPScoringScheme
- ~Dssp()
: core::scoring::dssp::Dssp
- ~DsspMover()
: protocols::moves::DsspMover
- ~DummyClass()
: protocols::toolbox::DummyClass
- ~DumpPdb()
: protocols::simple_moves::DumpPdb
- ~DunbrackConstraint()
: core::pack::dunbrack::DunbrackConstraint
- ~DunbrackConstraintCreator()
: core::pack::dunbrack::DunbrackConstraintCreator
- ~DunbrackEnergy()
: core::pack::dunbrack::DunbrackEnergy
- ~DunbrackRotamerSampleData()
: core::pack::dunbrack::DunbrackRotamerSampleData
- ~DynamicAggregateFunction()
: protocols::pack_daemon::DynamicAggregateFunction
- ~Edge()
: core::graph::Edge
- ~EdgeBase()
: core::pack::interaction_graph::EdgeBase
- ~EdgeList()
: core::graph::EdgeList
- ~EdgeListConstIterator()
: core::graph::EdgeListConstIterator
- ~EdgeListElement()
: core::graph::EdgeListElement
- ~EdgeListIterator()
: core::graph::EdgeListIterator
- ~EdgeStandScore()
: protocols::sic_dock::EdgeStandScore
- ~ElecAtom()
: core::scoring::hackelec::ElecAtom
- ~ElecDensAtomwiseEnergy()
: core::scoring::electron_density_atomwise::ElecDensAtomwiseEnergy
- ~ElectronDensity()
: core::scoring::electron_density::ElectronDensity
- ~ElectronDensityLoader()
: core::scoring::electron_density::ElectronDensityLoader
- ~ElectronDensityLoaderCreator()
: core::scoring::electron_density::ElectronDensityLoaderCreator
- ~ElectronDensityOptions()
: core::scoring::electron_density::ElectronDensityOptions
- ~ElectronDensityOptionsCreator()
: core::scoring::electron_density::ElectronDensityOptionsCreator
- ~ElementSet()
: core::chemical::ElementSet
- ~EndPoint()
: protocols::wum2::EndPoint
- ~Energies()
: core::scoring::Energies
- ~EnergyCutRotamerTrialsMinMover()
: protocols::simple_moves::EnergyCutRotamerTrialsMinMover
- ~EnergyCutRotamerTrialsMover()
: protocols::simple_moves::EnergyCutRotamerTrialsMover
- ~EnergyEdge()
: core::scoring::EnergyEdge
- ~EnergyEval()
: core::fragment::picking_old::vall::eval::EnergyEval
- ~EnergyEvent()
: core::pose::signals::EnergyEvent
- ~EnergyGraph()
: core::scoring::EnergyGraph
- ~EnergyMethod()
: core::scoring::methods::EnergyMethod
- ~EnergyMethodOptions()
: core::scoring::methods::EnergyMethodOptions
- ~EnergyNode()
: core::scoring::EnergyNode
- ~EnergyPerResidueFilter()
: protocols::simple_filters::EnergyPerResidueFilter
- ~Entity()
: protocols::genetic_algorithm::Entity
- ~EntityCorrespondence()
: protocols::pack_daemon::EntityCorrespondence
- ~EntityElement()
: protocols::genetic_algorithm::EntityElement
- ~EntityElementCreator()
: protocols::genetic_algorithm::EntityElementCreator
- ~EntityElementFactory()
: protocols::genetic_algorithm::EntityElementFactory
- ~EntityFunc()
: protocols::pack_daemon::EntityFunc
- ~EntityFuncExpressionCreator()
: protocols::pack_daemon::EntityFuncExpressionCreator
- ~EntityRandomizer()
: protocols::genetic_algorithm::EntityRandomizer
- ~EnzConstraintIO()
: protocols::toolbox::match_enzdes_util::EnzConstraintIO
- ~EnzConstraintParameters()
: protocols::toolbox::match_enzdes_util::EnzConstraintParameters
- ~EnzCstTemplateRes()
: protocols::toolbox::match_enzdes_util::EnzCstTemplateRes
- ~EnzCstTemplateResAtoms()
: protocols::toolbox::match_enzdes_util::EnzCstTemplateResAtoms
- ~EnzCstTemplateResCache()
: protocols::toolbox::match_enzdes_util::EnzCstTemplateResCache
- ~EnzdesCacheableObserver()
: protocols::toolbox::match_enzdes_util::EnzdesCacheableObserver
- ~EnzdesConstraintReporter()
: protocols::enzdes::EnzdesConstraintReporter
- ~EnzdesCstCache()
: protocols::toolbox::match_enzdes_util::EnzdesCstCache
- ~EnzdesCstParamCache()
: protocols::toolbox::match_enzdes_util::EnzdesCstParamCache
- ~EnzdesFixBBProtocol()
: protocols::enzdes::EnzdesFixBBProtocol
- ~EnzdesFlexBBProtocol()
: protocols::enzdes::EnzdesFlexBBProtocol
- ~EnzdesFlexibleRegion()
: protocols::enzdes::EnzdesFlexibleRegion
- ~EnzdesJobInputter()
: protocols::enzdes::EnzdesJobInputter
- ~EnzdesJobOutputter()
: protocols::enzdes::EnzdesJobOutputter
- ~EnzdesLoopInfo()
: protocols::toolbox::match_enzdes_util::EnzdesLoopInfo
- ~EnzdesLoopsFile()
: protocols::toolbox::match_enzdes_util::EnzdesLoopsFile
- ~EnzdesScorefileFilter()
: protocols::enzdes::EnzdesScorefileFilter
- ~EnzdesSeqRecoveryCache()
: protocols::toolbox::match_enzdes_util::EnzdesSeqRecoveryCache
- ~EnzRepackMinimize()
: protocols::enzdes::EnzRepackMinimize
- ~EnzScoreFilter()
: protocols::enzdes::EnzScoreFilter
- ~Etable()
: core::scoring::etable::Etable
- ~EtableAtom()
: core::scoring::etable::etrie::EtableAtom
- ~EtableEvaluator()
: core::scoring::etable::EtableEvaluator
- ~EvaluatedArchive()
: protocols::jd2::archive::EvaluatedArchive
- ~EvaluatedTrialMover()
: protocols::simple_filters::EvaluatedTrialMover
- ~EvaluatorCreator()
: protocols::evaluation::EvaluatorCreator
- ~EvaluatorFactory()
: protocols::evaluation::EvaluatorFactory
- ~ExactOccludedHbondSolEnergy()
: core::scoring::geometric_solvation::ExactOccludedHbondSolEnergy
- ~ExcludedResPredicate()
: core::scoring::ExcludedResPredicate
- ~Exemplar()
: protocols::cluster::Exemplar
- ~ExpExpression()
: protocols::pack_daemon::ExpExpression
- ~ExpiryFilter()
: protocols::simple_filters::ExpiryFilter
- ~ExtendAlignerSW()
: core::sequence::ExtendAlignerSW
- ~ExtendedPoseInputStream()
: core::import_pose::pose_stream::ExtendedPoseInputStream
- ~ExternalEvaluator()
: protocols::simple_filters::ExternalEvaluator
- ~ExternalGeomSampler()
: protocols::toolbox::match_enzdes_util::ExternalGeomSampler
- ~ExtraChiCutoff()
: core::pack::task::operation::ExtraChiCutoff
- ~ExtractAsymmetricPoseMover()
: protocols::simple_moves::symmetry::ExtractAsymmetricPoseMover
- ~ExtractAsymmetricUnitMover()
: protocols::simple_moves::symmetry::ExtractAsymmetricUnitMover
- ~ExtraRotamers()
: core::pack::task::operation::ExtraRotamers
- ~ExtraRotamersGeneric()
: core::pack::task::operation::ExtraRotamersGeneric
- ~ExtraScoreEvaluatorCreator()
: protocols::simple_filters::ExtraScoreEvaluatorCreator
- ~ExtraThreadingMover()
: protocols::comparative_modeling::ExtraThreadingMover
- ~FabConstraintCreator()
: core::scoring::constraints::FabConstraintCreator
- ~FadeInterval()
: core::scoring::hbonds::FadeInterval
- ~FaDockingSlideIntoContact()
: protocols::docking::FaDockingSlideIntoContact
- ~FASelectSlidingWindowLoopClosure()
: protocols::loops::loop_closure::ccd::FASelectSlidingWindowLoopClosure
- ~FaSlideAwayFromSurface()
: protocols::surface_docking::FaSlideAwayFromSurface
- ~FaSlideIntoSurface()
: protocols::surface_docking::FaSlideIntoSurface
- ~FastaInputter()
: protocols::inputter::FastaInputter
- ~FASTER_IG_Repacker()
: protocols::pack_daemon::FASTER_IG_Repacker
- ~FASTERAnnealer()
: core::pack::annealer::FASTERAnnealer
- ~FASTEREdge()
: core::pack::interaction_graph::FASTEREdge
- ~FASTERNode()
: core::pack::interaction_graph::FASTERNode
- ~FastLinearFunc()
: protocols::moves::FastLinearFunc
- ~FastRelax()
: protocols::relax::FastRelax
- ~FaSymDockingSlideTogether()
: protocols::simple_moves::symmetry::FaSymDockingSlideTogether
- ~FavorNativeResidue()
: protocols::protein_interface_design::FavorNativeResidue
- ~FavorNativeResiduePreCycle()
: protocols::protein_interface_design::movers::FavorNativeResiduePreCycle
- ~FavorNonNativeResidue()
: protocols::protein_interface_design::FavorNonNativeResidue
- ~FavorNonNativeResiduePreCycle()
: protocols::protein_interface_design::movers::FavorNonNativeResiduePreCycle
- ~FavorSequenceProfile()
: protocols::simple_moves::FavorSequenceProfile
- ~FB_Pose_Data()
: protocols::swa::rna::FB_Pose_Data
- ~FeaturesReporter()
: protocols::features::FeaturesReporter
- ~FeaturesReporterCreator()
: protocols::features::FeaturesReporterCreator
- ~FeaturesReporterFactory()
: protocols::features::FeaturesReporterFactory
- ~FileData()
: core::io::pdb::FileData
- ~FileDataOptions()
: core::io::pdb::FileDataOptions
- ~FileExistFilter()
: protocols::simple_filters::FileExistFilter
- ~FileJobOutputter()
: protocols::jd2::FileJobOutputter
- ~FileRemoveFilter()
: protocols::simple_filters::FileRemoveFilter
- ~FileSystemJobDistributor()
: protocols::jd2::FileSystemJobDistributor
- ~Filter()
: protocols::filters::Filter
- ~FilterCollection()
: protocols::filters::FilterCollection
- ~FilterCreator()
: protocols::filters::FilterCreator
- ~Filterer_Count()
: protocols::swa::rna::Filterer_Count
- ~FilterFactory()
: protocols::filters::FilterFactory
- ~FilterMover()
: protocols::moves::FilterMover
- ~FilterScanFilter()
: protocols::protein_interface_design::filters::FilterScanFilter
- ~FilterStructs()
: protocols::flxbb::FilterStructs
- ~FilterStructs_Packstat()
: protocols::flxbb::FilterStructs_Packstat
- ~FilterStructs_TotalCharge()
: protocols::flxbb::FilterStructs_TotalCharge
- ~FinalMinimizer()
: protocols::ligand_docking::FinalMinimizer
- ~FingerprintBase()
: protocols::pockets::FingerprintBase
- ~FingerprintMultifunc()
: protocols::pockets::FingerprintMultifunc
- ~FirstClassEdge()
: core::pack::interaction_graph::FirstClassEdge< V, E, G >
- ~FirstClassNode()
: core::pack::interaction_graph::FirstClassNode< V, E, G >
- ~FitnessFunction()
: protocols::genetic_algorithm::FitnessFunction
- ~FixbbCoupledRotamerSimAnnealer()
: core::pack::annealer::FixbbCoupledRotamerSimAnnealer
- ~FixbbLinkingRotamerSimAnnealer()
: core::pack::annealer::FixbbLinkingRotamerSimAnnealer
- ~FixbbRotamerSets()
: core::pack::rotamer_set::FixbbRotamerSets
- ~FixbbSimAnnealer()
: core::pack::annealer::FixbbSimAnnealer
- ~FixedBBEdge()
: core::pack::interaction_graph::FixedBBEdge
- ~FixedBBInteractionGraph()
: core::pack::interaction_graph::FixedBBInteractionGraph
- ~FixedBBNode()
: core::pack::interaction_graph::FixedBBNode
- ~FixTemplateJumpSetup()
: protocols::abinitio::FixTemplateJumpSetup
- ~FlexbbEdge()
: protocols::flexpack::interaction_graph::FlexbbEdge
- ~FlexbbInteractionGraph()
: protocols::flexpack::interaction_graph::FlexbbInteractionGraph
- ~FlexbbNode()
: protocols::flexpack::interaction_graph::FlexbbNode
- ~FlexbbRotamerSet()
: protocols::flexpack::rotamer_set::FlexbbRotamerSet
- ~FlexbbRotamerSets()
: protocols::flexpack::rotamer_set::FlexbbRotamerSets
- ~FlexbbSimAnnealer()
: protocols::flexpack::annealer::FlexbbSimAnnealer
- ~FlexPacker()
: protocols::flexpack::FlexPacker
- ~FlexPepDockingAbInitio()
: protocols::flexpep_docking::FlexPepDockingAbInitio
- ~FlexPepDockingLowRes()
: protocols::flexpep_docking::FlexPepDockingLowRes
- ~FlexPepDockingProtocol()
: protocols::flexpep_docking::FlexPepDockingProtocol
- ~FloatingBaseChainClosureJobParameter()
: protocols::swa::rna::FloatingBaseChainClosureJobParameter
- ~FloatingResonance()
: protocols::noesy_assign::FloatingResonance
- ~FloppyTailMover()
: protocols::floppy_tail::FloppyTailMover
- ~FlxbbDesign()
: protocols::flxbb::FlxbbDesign
- ~FlxbbDesignPack()
: protocols::flxbb::FlxbbDesignPack
- ~FoldConstraints()
: protocols::abinitio::FoldConstraints
- ~FoldTree()
: core::kinematics::FoldTree
- ~FoldTreeFromLoops()
: protocols::loops::FoldTreeFromLoops
- ~ForceDisulfidesMover()
: protocols::simple_moves::ForceDisulfidesMover
- ~FormatStringOutputter()
: protocols::outputter::FormatStringOutputter
- ~FormFactor()
: core::scoring::saxs::FormFactor
- ~FourAtomsConstraintData()
: protocols::frag_picker::scores::FourAtomsConstraintData
- ~FourPointsFunc()
: core::scoring::constraints::FourPointsFunc
- ~FragData()
: core::fragment::FragData
- ~FragID()
: core::fragment::FragID
- ~FragID_Iterator()
: core::fragment::FragID_Iterator
- ~FragInsertAndAlignMover()
: protocols::rbsegment_relax::FragInsertAndAlignMover
- ~FragmentAllAtomCrmsd()
: protocols::frag_picker::scores::FragmentAllAtomCrmsd
- ~FragmentCandidate()
: protocols::frag_picker::FragmentCandidate
- ~FragmentClaimer()
: protocols::topology_broker::FragmentClaimer
- ~FragmentCost()
: protocols::simple_moves::FragmentCost
- ~FragmentCrmsd()
: protocols::frag_picker::scores::FragmentCrmsd
- ~FragmentCrmsdResDepth()
: protocols::frag_picker::scores::FragmentCrmsdResDepth
- ~FragmentDME()
: protocols::frag_picker::scores::FragmentDME
- ~FragmentLibrary()
: protocols::rna::FragmentLibrary
- ~FragmentMover()
: protocols::simple_moves::FragmentMover
- ~FragmentPicker()
: protocols::frag_picker::FragmentPicker
- ~FragmentReader()
: protocols::jd2::parser::FragmentReader
- ~FragmentRmsd()
: core::fragment::FragmentRmsd
- ~FragmentSampler()
: protocols::abinitio::FragmentSampler
- ~FragmentScoreManager()
: protocols::frag_picker::scores::FragmentScoreManager
- ~FragmentSelectingRule()
: protocols::frag_picker::FragmentSelectingRule
- ~FragQualCalculator()
: protocols::toolbox::pose_metric_calculators::FragQualCalculator
- ~FragQualFilter()
: protocols::fldsgn::filters::FragQualFilter
- ~FragSet()
: core::fragment::FragSet
- ~FragSetCollection()
: core::fragment::FragSetCollection
- ~FragSetLoader()
: protocols::jd2::parser::FragSetLoader
- ~Frame()
: core::fragment::Frame
- ~FrameIterator()
: core::fragment::FrameIterator
- ~FullatomDisulfideEnergy()
: core::scoring::disulfides::FullatomDisulfideEnergy
- ~FullatomDisulfideEnergyContainer()
: core::scoring::disulfides::FullatomDisulfideEnergyContainer
- ~FullatomDisulfidePotential()
: core::scoring::disulfides::FullatomDisulfidePotential
- ~FullatomRelaxMover()
: protocols::surface_docking::FullatomRelaxMover
- ~FullAtomRNA_Fragments()
: protocols::rna::FullAtomRNA_Fragments
- ~FullChiSampleSet()
: protocols::match::upstream::FullChiSampleSet
- ~Func()
: core::scoring::constraints::Func
- ~FunGroupTK()
: protocols::kinmatch::FunGroupTK
- ~GaussianOverlapEnergy()
: core::scoring::methods::GaussianOverlapEnergy
- ~GenBornResidueInfo()
: core::scoring::GenBornResidueInfo
- ~GeneralEvent()
: core::conformation::signals::GeneralEvent
, core::pose::signals::GeneralEvent
- ~GenerateStoredRBConfs()
: protocols::enzdes::GenerateStoredRBConfs
- ~GenericMonteCarloMover()
: protocols::simple_moves::GenericMonteCarloMover
- ~GeneticAlgorithm()
: protocols::genetic_algorithm::GeneticAlgorithm
- ~GeometricFunc()
: protocols::moves::GeometricFunc
- ~GeometricSolvationFeatures()
: protocols::features::GeometricSolvationFeatures
- ~GeometricSolvationFeaturesCreator()
: protocols::features::GeometricSolvationFeaturesCreator
- ~GeomSampleInfo()
: protocols::toolbox::match_enzdes_util::GeomSampleInfo
- ~GraftCDRLoopsProtocol()
: protocols::antibody2::GraftCDRLoopsProtocol
- ~GraftMover()
: protocols::antibody::GraftMover
- ~GraftMoverBase()
: protocols::grafting::GraftMoverBase
- ~GraftOneCDRLoop()
: protocols::antibody2::GraftOneCDRLoop
- ~Graph()
: core::graph::Graph
- ~GreedyOptMutationMover()
: protocols::design_opt::GreedyOptMutationMover
- ~GreenPacker()
: protocols::simple_moves::GreenPacker
- ~GridBase()
: protocols::qsar::scoring_grid::GridBase
- ~GridCreator()
: protocols::qsar::scoring_grid::GridCreator
- ~GridFactory()
: protocols::qsar::scoring_grid::GridFactory
- ~GridInitMover()
: protocols::qsar::scoring_grid::GridInitMover
- ~GridSearchIterator()
: protocols::scoring::methods::pcs::GridSearchIterator
, protocols::scoring::methods::pcs2::GridSearchIterator
- ~GridSearchIteratorCA()
: protocols::scoring::methods::pcs2::GridSearchIteratorCA
- ~GroupDiscriminator()
: protocols::simple_moves::GroupDiscriminator
- ~GrowLeft()
: protocols::forge::build::GrowLeft
- ~GrowLigand()
: protocols::ligand_docking::GrowLigand
- ~GrowPeptides()
: protocols::seeded_abinitio::GrowPeptides
- ~GrowRight()
: protocols::forge::build::GrowRight
- ~GuardedLoopsFromFile()
: protocols::loops::GuardedLoopsFromFile
- ~GunnCost()
: protocols::frag_picker::scores::GunnCost
, protocols::simple_moves::GunnCost
- ~GunnCostScore()
: protocols::frag_picker::scores::GunnCostScore
- ~H3CterInsert()
: protocols::antibody2::H3CterInsert
- ~H3PerturbCCD()
: protocols::antibody2::H3PerturbCCD
- ~H3RefineCCD()
: protocols::antibody2::H3RefineCCD
- ~Hairpin()
: core::scoring::Hairpin
- ~Hairpins()
: core::scoring::Hairpins
- ~HamiltonianExchange()
: protocols::canonical_sampling::HamiltonianExchange
- ~HbaGrid()
: protocols::qsar::scoring_grid::HbaGrid
- ~HBAtom()
: core::scoring::hbonds::hbtrie::HBAtom
- ~HBCountPairFunction()
: core::scoring::hbonds::hbtrie::HBCountPairFunction
- ~HbdGrid()
: protocols::qsar::scoring_grid::HbdGrid
- ~HBEvalTuple()
: core::scoring::hbonds::HBEvalTuple
- ~HBond()
: core::scoring::hbonds::HBond
- ~HBondAcceptorFilter()
: protocols::ligand_docking::HBondAcceptorFilter
- ~HBondDatabase()
: core::scoring::hbonds::HBondDatabase
- ~HBondDonorFilter()
: protocols::ligand_docking::HBondDonorFilter
- ~HBondEnergy()
: core::scoring::hbonds::HBondEnergy
- ~HBondFeatures()
: protocols::features::HBondFeatures
- ~HBondFeaturesCreator()
: protocols::features::HBondFeaturesCreator
- ~HBondOptions()
: core::scoring::hbonds::HBondOptions
- ~HBondParameterFeatures()
: protocols::features::HBondParameterFeatures
- ~HBondParameterFeaturesCreator()
: protocols::features::HBondParameterFeaturesCreator
- ~HBondResidueMinData()
: core::scoring::hbonds::HBondResidueMinData
- ~HBondResPairMinData()
: core::scoring::hbonds::HBondResPairMinData
- ~HBondSet()
: core::scoring::hbonds::HBondSet
- ~HbondsToResidueFilter()
: protocols::protein_interface_design::filters::HbondsToResidueFilter
- ~HbsPatcher()
: protocols::simple_moves::hbs::HbsPatcher
- ~HeaderInformation()
: core::io::pdb::HeaderInformation
- ~HeavyAtomFilter()
: protocols::filters::HeavyAtomFilter
, protocols::ligand_docking::HeavyAtomFilter
- ~HelicalFragment()
: protocols::features::helixAssembly::HelicalFragment
- ~Helices()
: core::scoring::Helices
- ~Helix()
: protocols::fldsgn::topology::Helix
- ~HelixBundleFeaturesCreator()
: protocols::features::helixAssembly::HelixBundleFeaturesCreator
- ~HelixKinkFilter()
: protocols::fldsgn::filters::HelixKinkFilter
- ~HelixPairing()
: protocols::fldsgn::topology::HelixPairing
- ~HelixPairingFilter()
: protocols::fldsgn::filters::HelixPairingFilter
- ~HelixPairingSet()
: protocols::fldsgn::topology::HelixPairingSet
- ~HelixScore()
: protocols::sic_dock::HelixScore
- ~HighResDocker()
: protocols::ligand_docking::HighResDocker
- ~HitHasher()
: protocols::match::HitHasher
- ~HitNeighborFinder()
: protocols::match::HitNeighborFinder
- ~HolesFilter()
: protocols::simple_filters::HolesFilter
- ~HolesResult()
: core::scoring::packing::HolesResult
- ~HotspotDisjointedFoldTreeMover()
: protocols::protein_interface_design::movers::HotspotDisjointedFoldTreeMover
- ~HotspotHasherMover()
: protocols::protein_interface_design::movers::HotspotHasherMover
- ~HotspotStub()
: protocols::hotspot_hashing::HotspotStub
- ~HotspotStubSet()
: protocols::hotspot_hashing::HotspotStubSet
- ~HPatchBackgroundEdge()
: core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G >
- ~HPatchBackgroundNode()
: core::pack::interaction_graph::HPatchBackgroundNode< V, E, G >
- ~HPatchCalculator()
: protocols::toolbox::pose_metric_calculators::HPatchCalculator
- ~HPatchEdge()
: core::pack::interaction_graph::HPatchEdge< V, E, G >
- ~HPatchInteractionGraph()
: core::pack::interaction_graph::HPatchInteractionGraph< V, E, G >
- ~HPatchNode()
: core::pack::interaction_graph::HPatchNode< V, E, G >
- ~HSPairPotential()
: protocols::fldsgn::potentials::sspot::HSPairPotential
- ~HSSTriplet()
: protocols::fldsgn::topology::HSSTriplet
- ~HSSTripletFilter()
: protocols::fldsgn::filters::HSSTripletFilter
- ~HSSTripletSet()
: protocols::fldsgn::topology::HSSTripletSet
- ~HydrophobicityProfileSimilarity()
: protocols::frag_picker::scores::HydrophobicityProfileSimilarity
- ~HydrophobicitySimilarity()
: protocols::frag_picker::scores::HydrophobicitySimilarity
- ~I_PARAM()
: core::scoring::APBSConfig::I_PARAM
- ~IdealBondLengthSet()
: core::chemical::IdealBondLengthSet
- ~IdentityEval()
: core::fragment::picking_old::vall::eval::IdentityEval
- ~IdentityEvent()
: core::conformation::signals::IdentityEvent
- ~IfMover()
: protocols::moves::IfMover
- ~IfThenFilter()
: protocols::filters::IfThenFilter
- ~IGEdgeReweightContainer()
: core::pack::task::IGEdgeReweightContainer
- ~IGEdgeReweighter()
: core::pack::task::IGEdgeReweighter
- ~ImplicitFastClashCheck()
: protocols::scoring::ImplicitFastClashCheck
- ~ImportPoseOptions()
: core::import_pose::ImportPoseOptions
- ~ImportPoseOptionsCreator()
: core::import_pose::ImportPoseOptionsCreator
- ~IncludeCurrent()
: core::pack::task::operation::IncludeCurrent
- ~IndependentBBTorsionSRFD()
: core::fragment::IndependentBBTorsionSRFD
- ~IndependentLoopMover()
: protocols::loops::loop_mover::IndependentLoopMover
- ~InitializeExtraRotsFromCommandline()
: core::pack::task::operation::InitializeExtraRotsFromCommandline
- ~InitializeFromCommandline()
: core::pack::task::operation::InitializeFromCommandline
- ~InnerJob()
: protocols::jd2::InnerJob
- ~InnerMultiThreadingJob()
: protocols::jd2::InnerMultiThreadingJob
- ~InputStreamWithResidueInfo()
: protocols::swa::InputStreamWithResidueInfo
- ~Inputter()
: protocols::inputter::Inputter
- ~InputterStream()
: protocols::inputter::InputterStream
- ~InsertChunkMover()
: protocols::hybridization::InsertChunkMover
- ~InSetExpression()
: protocols::pack_daemon::InSetExpression
- ~InteractionGraphBase()
: core::pack::interaction_graph::InteractionGraphBase
- ~InterfaceAnalyzerMover()
: protocols::analysis::InterfaceAnalyzerMover
- ~InterfaceBindingEnergyDensityFilter()
: protocols::simple_filters::InterfaceBindingEnergyDensityFilter
- ~InterfaceBuilder()
: protocols::ligand_docking::InterfaceBuilder
- ~InterfaceBuilderLoader()
: protocols::ligand_docking::InterfaceBuilderLoader
- ~InterfaceHolesFilter()
: protocols::protein_interface_design::filters::InterfaceHolesFilter
- ~InterfaceRecapitulationMover()
: protocols::protein_interface_design::movers::InterfaceRecapitulationMover
- ~InterfaceSasaFilter()
: protocols::simple_filters::InterfaceSasaFilter
- ~InterfaceScoreCalculator()
: protocols::ligand_docking::InterfaceScoreCalculator
- ~InterfaceSidechainMinMover()
: protocols::docking::InterfaceSidechainMinMover
- ~InterfaceTaskOperation()
: protocols::toolbox::task_operations::InterfaceTaskOperation
- ~InterGroupNeighborsCalculator()
: protocols::toolbox::pose_metric_calculators::InterGroupNeighborsCalculator
- ~InterlockAroma()
: protocols::flxbb::InterlockAroma
- ~InterlockingAromaFilter()
: protocols::fldsgn::filters::InterlockingAromaFilter
- ~InternalWorkingResidueParameter()
: protocols::swa::rna::InternalWorkingResidueParameter
- ~Interval()
: protocols::forge::build::Interval
- ~InverseRotamersRCG()
: protocols::forge::constraints::InverseRotamersRCG
- ~InvGeometricFunc()
: protocols::moves::InvGeometricFunc
- ~Invoker()
: core::scoring::etable::count_pair::Invoker
- ~InvRotamerDots()
: core::pack::interaction_graph::InvRotamerDots
- ~InvrotCollector()
: protocols::toolbox::match_enzdes_util::InvrotCollector
- ~InvrotTarget()
: protocols::toolbox::match_enzdes_util::InvrotTarget
- ~InvrotTree()
: protocols::toolbox::match_enzdes_util::InvrotTree
- ~InvrotTreeNode()
: protocols::toolbox::match_enzdes_util::InvrotTreeNode
- ~InvrotTreeNodeBase()
: protocols::toolbox::match_enzdes_util::InvrotTreeNodeBase
- ~InvrotTreeRCG()
: protocols::forge::constraints::InvrotTreeRCG
- ~IsProteinCAPredicate()
: core::scoring::IsProteinCAPredicate
- ~IteratedConvergenceMover()
: protocols::moves::IteratedConvergenceMover
- ~IterativeBase()
: protocols::abinitio::IterativeBase
- ~IterativeOptEDriver()
: protocols::optimize_weights::IterativeOptEDriver
- ~IterativeVectorExpression()
: protocols::pack_daemon::IterativeVectorExpression
- ~iterator()
: core::io::raw_data::RawFileData::iterator
, core::io::silent::SilentFileData::iterator
- ~JD2ResourceManager()
: protocols::jd2::JD2ResourceManager
- ~JD2ResourceManagerCreator()
: protocols::jd2::JD2ResourceManagerCreator
- ~JD2ResourceManagerJobInputter()
: protocols::jd2::JD2ResourceManagerJobInputter
- ~Job()
: protocols::jd2::Job
- ~JobDataFeatures()
: protocols::features::JobDataFeatures
- ~JobDataFeaturesCreator()
: protocols::features::JobDataFeaturesCreator
- ~JobDistributor()
: protocols::jd2::JobDistributor
- ~JobInputter()
: protocols::jd2::JobInputter
- ~JobInputterCreator()
: protocols::jd2::JobInputterCreator
- ~JobInputterFactory()
: protocols::jd2::JobInputterFactory
- ~JobOutputter()
: protocols::jd2::JobOutputter
- ~JobOutputterCreator()
: protocols::jd2::JobOutputterCreator
- ~JobOutputterFactory()
: protocols::jd2::JobOutputterFactory
- ~JointScore()
: protocols::sic_dock::JointScore
- ~JointSequenceOperation()
: protocols::toolbox::task_operations::JointSequenceOperation
- ~JScoreEvaluator()
: protocols::simple_filters::JScoreEvaluator
- ~JScoreEvaluatorCreator()
: protocols::simple_filters::JScoreEvaluatorCreator
- ~Jump_point()
: protocols::swa::rna::Jump_point
- ~JumpClaimer()
: protocols::topology_broker::JumpClaimer
- ~JumpingFoldConstraints()
: protocols::abinitio::JumpingFoldConstraints
- ~JumpNrEvaluatorCreator()
: protocols::simple_filters::JumpNrEvaluatorCreator
- ~JumpOutMover()
: protocols::moves::JumpOutMover
- ~JumpSample()
: protocols::jumping::JumpSample
- ~JumpSelector()
: protocols::jumping::JumpSelector
- ~KCluster()
: protocols::toolbox::KCluster
- ~KClusterData()
: protocols::toolbox::KClusterData
- ~KClusterElement()
: protocols::toolbox::KClusterElement
- ~KinematicAbinitio()
: protocols::abinitio::KinematicAbinitio
- ~KinematicControl()
: protocols::abinitio::KinematicControl
- ~KinematicMover()
: protocols::loops::loop_closure::kinematic_closure::KinematicMover
- ~KinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::KinematicPerturber
- ~KinematicTaskControl()
: protocols::abinitio::KinematicTaskControl
- ~KinematicWrapper()
: protocols::loops::loop_closure::kinematic_closure::KinematicWrapper
- ~KofNConstraintCreator()
: core::scoring::constraints::KofNConstraintCreator
- ~L1ScoringScheme()
: core::sequence::L1ScoringScheme
- ~LayerDesignOperation()
: protocols::flxbb::LayerDesignOperation
- ~LayerOperations()
: protocols::toolbox::task_operations::LayerOperations
- ~LazyEdge()
: core::pack::interaction_graph::LazyEdge
- ~LazyInteractionGraph()
: core::pack::interaction_graph::LazyInteractionGraph
- ~LazyNode()
: core::pack::interaction_graph::LazyNode
- ~LazySilentFileJobInputter()
: protocols::jd2::LazySilentFileJobInputter
- ~LazySilentFilePoseInputStream()
: core::import_pose::pose_stream::LazySilentFilePoseInputStream
- ~LazySortedVector1()
: protocols::frag_picker::LazySortedVector1< T, StrictWeakOrdering >
- ~LeeRichards()
: core::scoring::packstat::LeeRichards
- ~LengthEvent()
: core::conformation::signals::LengthEvent
- ~LengthEventCollector()
: core::pose::datacache::LengthEventCollector
- ~LengthGen()
: core::fragment::picking_old::vall::gen::LengthGen
- ~LHRepulsiveRamp()
: protocols::antibody2::LHRepulsiveRamp
- ~LHRepulsiveRampLegacy()
: protocols::antibody2::LHRepulsiveRampLegacy
- ~LHSnugFitLegacy()
: protocols::antibody2::LHSnugFitLegacy
- ~Librarian()
: core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library >
- ~Library()
: core::fragment::picking_old::concepts::Library< Books >
- ~LigandArea()
: protocols::ligand_docking::LigandArea
- ~LigandAreaLoader()
: protocols::ligand_docking::LigandAreaLoader
- ~LigandBaseProtocol()
: protocols::ligand_docking::LigandBaseProtocol
- ~LigandConformer()
: protocols::toolbox::match_enzdes_util::LigandConformer
- ~LigandConformerBuilder()
: protocols::match::downstream::LigandConformerBuilder
- ~LigandDesign()
: protocols::ligand_docking::LigandDesign
- ~LigandDockMain()
: protocols::ligand_docking::LigandDockMain
- ~LigandDockProtocol()
: protocols::ligand_docking::LigandDockProtocol
- ~LigandMotifSearch()
: protocols::motifs::LigandMotifSearch
- ~LigBurialFilter()
: protocols::enzdes::LigBurialFilter
- ~LigDSasaFilter()
: protocols::enzdes::LigDSasaFilter
- ~LigInterfaceEnergyFilter()
: protocols::enzdes::LigInterfaceEnergyFilter
- ~LimitAromaChi2_RotamerSetOperation()
: protocols::toolbox::task_operations::LimitAromaChi2_RotamerSetOperation
- ~LimitAromaChi2Operation()
: protocols::toolbox::task_operations::LimitAromaChi2Operation
- ~LimitHitsPerRotamerFilter()
: protocols::match::output::LimitHitsPerRotamerFilter
- ~Line()
: core::util::Line
- ~LinearChainbreakEnergy()
: core::scoring::methods::LinearChainbreakEnergy
- ~LinearFunc()
: protocols::moves::LinearFunc
- ~LinearMemEdge()
: core::pack::interaction_graph::LinearMemEdge
- ~LinearMemNode()
: core::pack::interaction_graph::LinearMemNode
- ~LinearMemoryInteractionGraph()
: core::pack::interaction_graph::LinearMemoryInteractionGraph
- ~LineMinimizationAlgorithm()
: core::optimization::LineMinimizationAlgorithm
- ~LinkerScore()
: protocols::sic_dock::LinkerScore
- ~LKB_ResidueInfo()
: core::scoring::methods::LKB_ResidueInfo
- ~LnExpression()
: protocols::pack_daemon::LnExpression
- ~LoadUnboundRotMover()
: protocols::simple_moves::LoadUnboundRotMover
- ~LocalCoordinateConstraint()
: core::scoring::constraints::LocalCoordinateConstraint
- ~LocalCoordinateConstraintCreator()
: core::scoring::constraints::LocalCoordinateConstraintCreator
- ~LocalInserter()
: protocols::loophash::LocalInserter
- ~LoggedFragmentMover()
: protocols::simple_moves::LoggedFragmentMover
- ~LongRangeTwoBodyEnergy()
: core::scoring::methods::LongRangeTwoBodyEnergy
- ~Loop()
: protocols::fldsgn::topology::Loop
, protocols::loops::Loop
- ~LoopAnalyzerMover()
: protocols::analysis::LoopAnalyzerMover
- ~LoopAnchorFeatures()
: protocols::features::LoopAnchorFeatures
- ~LoopAnchorFeaturesCreator()
: protocols::features::LoopAnchorFeaturesCreator
- ~LoopClosure()
: protocols::loops::loop_closure::ccd::LoopClosure
- ~LoopFinder()
: protocols::protein_interface_design::movers::LoopFinder
- ~LoopHashDiversifier()
: protocols::loophash::LoopHashDiversifier
- ~LoopHashMoverWrapper()
: protocols::loophash::LoopHashMoverWrapper
- ~LoopHashSampler()
: protocols::loophash::LoopHashSampler
- ~LoopJumpFoldCst()
: protocols::abinitio::LoopJumpFoldCst
- ~LoopLengthChange()
: protocols::protein_interface_design::movers::LoopLengthChange
- ~LoopMover()
: protocols::loops::loop_mover::LoopMover
- ~LoopMover_Perturb_CCD()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_CCD
- ~LoopMover_Perturb_CCDCreator()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_CCDCreator
- ~LoopMover_Perturb_KIC()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_KIC
- ~LoopMover_Perturb_KICCreator()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_KICCreator
- ~LoopMover_Perturb_QuickCCD()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD
- ~LoopMover_Perturb_QuickCCD_MovesCreator()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD_MovesCreator
- ~LoopMover_Perturb_QuickCCDCreator()
: protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCDCreator
- ~LoopMover_Refine_Backrub()
: protocols::loops::loop_mover::refine::LoopMover_Refine_Backrub
- ~LoopMover_Refine_BackrubCreator()
: protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator
- ~LoopMover_Refine_CCD()
: protocols::loops::loop_mover::refine::LoopMover_Refine_CCD
- ~LoopMover_Refine_CCDCreator()
: protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator
- ~LoopMover_Refine_KIC()
: protocols::loops::loop_mover::refine::LoopMover_Refine_KIC
- ~LoopMover_Refine_KICCreator()
: protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator
- ~LoopMover_SlidingWindowCreator()
: protocols::loop_build::LoopMover_SlidingWindowCreator
- ~LoopMoverFactory()
: protocols::loops::LoopMoverFactory
- ~LoopMoverFromCommandLine()
: protocols::protein_interface_design::movers::LoopMoverFromCommandLine
- ~LoopOver()
: protocols::protein_interface_design::movers::LoopOver
- ~LoopRebuild()
: protocols::LoopRebuild
- ~LoopRefineInnerCycle()
: protocols::loops::loop_mover::refine::LoopRefineInnerCycle
- ~LoopRefineInnerCycleContainer()
: protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainer
- ~LoopRefineInnerCycleContainerCreator()
: protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator
- ~LoopRefineInnerCycleFactory()
: protocols::loops::loop_mover::refine::LoopRefineInnerCycleFactory
- ~LoopRelaxMover()
: protocols::comparative_modeling::LoopRelaxMover
- ~LoopRemodel()
: protocols::protein_interface_design::movers::LoopRemodel
- ~Loops()
: protocols::loops::Loops
- ~LoopsDatabaseDefiner()
: protocols::loops::loops_definers::LoopsDatabaseDefiner
- ~LoopsDatabaseDefinerCreator()
: protocols::loops::loops_definers::LoopsDatabaseDefinerCreator
- ~LoopsDefiner()
: protocols::loops::loops_definers::LoopsDefiner
- ~LoopsDefinerCreator()
: protocols::loops::loops_definers::LoopsDefinerCreator
- ~LoopsDefinerFactory()
: protocols::loops::loops_definers::LoopsDefinerFactory
- ~LoopsDefinerLoader()
: protocols::loops::loops_definers::LoopsDefinerLoader
- ~LoopsExplicitDefiner()
: protocols::loops::loops_definers::LoopsExplicitDefiner
- ~LoopsExplicitDefinerCreator()
: protocols::loops::loops_definers::LoopsExplicitDefinerCreator
- ~LoopsFileData()
: protocols::loops::LoopsFileData
- ~LoopsFileDefiner()
: protocols::loops::loops_definers::LoopsFileDefiner
- ~LoopsFileDefinerCreator()
: protocols::loops::loops_definers::LoopsFileDefinerCreator
- ~LoopsFileIO()
: protocols::loops::LoopsFileIO
- ~LoopsFileLoader()
: protocols::loops::LoopsFileLoader
- ~LoopsFileOptions()
: protocols::loops::LoopsFileOptions
- ~LREnergyContainer()
: core::scoring::LREnergyContainer
- ~MainChainTorsionSet()
: protocols::swa::MainChainTorsionSet
, protocols::swa::protein::MainChainTorsionSet
- ~MakePolyXMover()
: protocols::simple_moves::MakePolyXMover
- ~MapHotspot()
: protocols::protein_interface_design::movers::MapHotspot
- ~MatchCollisionFilter()
: protocols::match::output::MatchCollisionFilter
- ~MatchConsolidator()
: protocols::match::output::MatchConsolidator
- ~MatchConstraintFileInfo()
: protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo
- ~MatchConstraintFileInfoList()
: protocols::toolbox::match_enzdes_util::MatchConstraintFileInfoList
- ~MatchCounter()
: protocols::match::MatchCounter
- ~Matcher()
: protocols::match::Matcher
- ~MatcherMover()
: protocols::match::MatcherMover
- ~MatcherTask()
: protocols::match::MatcherTask
- ~MatchEvaluator()
: protocols::match::output::MatchEvaluator
- ~MatchFilter()
: protocols::match::output::MatchFilter
- ~MatchGrouper()
: protocols::match::output::MatchGrouper
- ~MatchOutputter()
: protocols::match::output::MatchOutputter
- ~MatchPositionModifier()
: protocols::match::MatchPositionModifier
- ~MatchProcessor()
: protocols::match::output::MatchProcessor
- ~MatchResidues()
: protocols::fldsgn::MatchResidues
- ~MatchResiduesMover()
: protocols::fldsgn::MatchResiduesMover
- ~MatrixScoringScheme()
: core::sequence::MatrixScoringScheme
- ~MaxSeqSepConstraintSet()
: protocols::constraints_additional::MaxSeqSepConstraintSet
- ~MCAligner()
: core::sequence::MCAligner
- ~MCShowMover()
: protocols::moves::MCShowMover
- ~MembraneJump()
: protocols::jumping::MembraneJump
- ~MembraneTopology()
: protocols::simple_moves::MembraneTopology
- ~MetalloClaimer()
: protocols::topology_broker::MetalloClaimer
- ~MetaPoseInputStream()
: core::import_pose::pose_stream::MetaPoseInputStream
- ~MetricCalculatorFitnessFunction()
: protocols::multistate_design::MetricCalculatorFitnessFunction
- ~MetricRecorder()
: protocols::canonical_sampling::MetricRecorder
- ~MetricValueGetter()
: protocols::toolbox::pose_metric_calculators::MetricValueGetter
- ~MetropolisHastingsMover()
: protocols::canonical_sampling::MetropolisHastingsMover
- ~MinimalistFlexbbEdge()
: protocols::flexpack::interaction_graph::MinimalistFlexbbEdge
- ~MinimalistFlexbbInteractionGraph()
: protocols::flexpack::interaction_graph::MinimalistFlexbbInteractionGraph
- ~MinimalistFlexbbNode()
: protocols::flexpack::interaction_graph::MinimalistFlexbbNode
- ~MinimalRotamer()
: protocols::simple_moves::MinimalRotamer
- ~MinimizationEdge()
: core::scoring::MinimizationEdge
- ~MinimizationGraph()
: core::scoring::MinimizationGraph
- ~MinimizationNode()
: core::scoring::MinimizationNode
- ~MinimizeBackbone()
: protocols::ligand_docking::MinimizeBackbone
- ~MinimizeLigand()
: protocols::ligand_docking::MinimizeLigand
- ~MinimizerMap()
: core::optimization::MinimizerMap
- ~MinimizerMapBase()
: core::kinematics::MinimizerMapBase
- ~MinimizerOptions()
: core::optimization::MinimizerOptions
- ~MinimizeStoredRBConfs()
: protocols::enzdes::MinimizeStoredRBConfs
- ~MiniPose()
: core::pose::MiniPose
- ~MiniRelax()
: protocols::relax::MiniRelax
- ~MinMover()
: protocols::simple_moves::MinMover
- ~MinPackMover()
: protocols::simple_moves::MinPackMover
- ~MissingDensityToJumpMover()
: protocols::simple_moves::MissingDensityToJumpMover
- ~MMAtomTypeSet()
: core::chemical::MMAtomTypeSet
- ~MMBondAngleEnergy()
: core::scoring::methods::MMBondAngleEnergy
- ~MMBondAngleLibrary()
: core::scoring::mm::MMBondAngleLibrary
- ~MMBondAngleResidueTypeParamSet()
: core::scoring::mm::MMBondAngleResidueTypeParamSet
- ~MMBondAngleScore()
: core::scoring::mm::MMBondAngleScore
- ~MMBondLengthEnergy()
: core::scoring::methods::MMBondLengthEnergy
- ~MMBondLengthLibrary()
: core::scoring::mm::MMBondLengthLibrary
- ~MMBondLengthScore()
: core::scoring::mm::MMBondLengthScore
- ~MMEnergyTableAtom()
: core::scoring::mm::mmtrie::MMEnergyTableAtom
- ~MMLJEnergyTable()
: core::scoring::mm::MMLJEnergyTable
- ~MMLJLibrary()
: core::scoring::mm::MMLJLibrary
- ~MMLJScore()
: core::scoring::mm::MMLJScore
- ~MMTorsionLibrary()
: core::scoring::mm::MMTorsionLibrary
- ~MMTorsionScore()
: core::scoring::mm::MMTorsionScore
- ~ModelCDRH3()
: protocols::antibody2::ModelCDRH3
- ~ModifyAnnealer()
: protocols::toolbox::task_operations::ModifyAnnealer
- ~ModifyStoredRBConfs()
: protocols::enzdes::ModifyStoredRBConfs
- ~MolarMassFilter()
: protocols::ligand_docking::MolarMassFilter
- ~MolData()
: core::chemical::sdf::MolData
- ~MolecularMassFilter()
: protocols::ligand_docking::MolecularMassFilter
- ~MolecularSurfaceCalculator()
: core::scoring::sc::MolecularSurfaceCalculator
- ~MonteCarlo()
: protocols::moves::MonteCarlo
- ~MonteCarloLoader()
: protocols::jd2::parser::MonteCarloLoader
- ~MonteCarloRecover()
: protocols::simple_moves::MonteCarloRecover
- ~MonteCarloTest()
: protocols::simple_moves::MonteCarloTest
- ~MonteCarloUtil()
: protocols::moves::MonteCarloUtil
- ~Motif()
: protocols::motifs::Motif
- ~MotifDnaPacker()
: protocols::motifs::MotifDnaPacker
- ~MotifHit()
: protocols::motifs::MotifHit
- ~MotifLibrary()
: protocols::motifs::MotifLibrary
- ~MotifSearch()
: protocols::motifs::MotifSearch
- ~MoveBeforeFilter()
: protocols::filters::MoveBeforeFilter
- ~MoveMap()
: core::kinematics::MoveMap
- ~MoveMapBuilder()
: protocols::ligand_docking::MoveMapBuilder
- ~MoveMapBuilderLoader()
: protocols::ligand_docking::MoveMapBuilderLoader
- ~Mover()
: protocols::moves::Mover
- ~MoverCreator()
: protocols::moves::MoverCreator
- ~MoverFactory()
: protocols::moves::MoverFactory
- ~MoverStatistics()
: protocols::moves::MoverStatistics
- ~MPI_LoopHashRefine()
: protocols::loophash::MPI_LoopHashRefine
- ~MPI_LoopHashRefine_Emperor()
: protocols::loophash::MPI_LoopHashRefine_Emperor
- ~MPI_LoopHashRefine_Master()
: protocols::loophash::MPI_LoopHashRefine_Master
- ~MPI_Relax()
: protocols::wum::MPI_Relax
- ~MPI_WorkUnitManager()
: protocols::wum::MPI_WorkUnitManager
- ~MPI_WorkUnitManager_Slave()
: protocols::wum::MPI_WorkUnitManager_Slave
- ~MpiFileBuffer()
: protocols::jd2::MpiFileBuffer
- ~MPIFileBufJobDistributor()
: protocols::jd2::MPIFileBufJobDistributor
- ~MPIMultistateFitnessFunction()
: protocols::pack_daemon::MPIMultistateFitnessFunction
- ~MPIWorkPartitionJobDistributor()
: protocols::jd2::MPIWorkPartitionJobDistributor
- ~MPIWorkPoolJobDistributor()
: protocols::jd2::MPIWorkPoolJobDistributor
- ~MultiConstraintCreator()
: core::scoring::constraints::MultiConstraintCreator
- ~MultiCoolAnnealer()
: core::pack::annealer::MultiCoolAnnealer
- ~Multifunc()
: core::optimization::Multifunc
- ~MultiStateAggregateFunction()
: protocols::multistate_design::MultiStateAggregateFunction
- ~MultistateAggregateFunction()
: protocols::pack_daemon::MultistateAggregateFunction
- ~MultiStateEntity()
: protocols::multistate_design::MultiStateEntity< T >
- ~MultistateFitnessFunction()
: protocols::pack_daemon::MultistateFitnessFunction
- ~MultiStateFitnessFunction()
: protocols::multistate_design::MultiStateFitnessFunction
- ~MultiStatePacker()
: protocols::multistate_design::MultiStatePacker
- ~MultiThreadingJob()
: protocols::jd2::MultiThreadingJob
- ~MultiThreadingMover()
: protocols::comparative_modeling::MultiThreadingMover
- ~Mutant()
: protocols::pmut_scan::Mutant
- ~MutateResidue()
: protocols::simple_moves::MutateResidue
- ~MutationData()
: protocols::pmut_scan::MutationData
- ~NamedAtomPairConstraintCreator()
: protocols::constraints_additional::NamedAtomPairConstraintCreator
- ~NatbiasHelicesSheetPotential()
: protocols::fldsgn::potentials::sspot::NatbiasHelicesSheetPotential
- ~NatbiasHelixPairPotential()
: protocols::fldsgn::potentials::sspot::NatbiasHelixPairPotential
- ~NatbiasSheetPotential()
: protocols::fldsgn::potentials::sspot::NatbiasSheetPotential
- ~NatbiasStrandPairPotential()
: protocols::fldsgn::potentials::sspot::NatbiasStrandPairPotential
- ~NativeEvaluatorCreator()
: protocols::simple_filters::NativeEvaluatorCreator
- ~NBListCache()
: core::scoring::symmetry::NBListCache
- ~NCaCaC_Dihedral_Func()
: core::scoring::disulfides::NCaCaC_Dihedral_Func
- ~NcontactsCalculator()
: protocols::fldsgn::NcontactsCalculator
- ~NcontactsFilter()
: protocols::fldsgn::filters::NcontactsFilter
- ~NeighborDependentTabooSamplingKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::NeighborDependentTabooSamplingKinematicPerturber
- ~NeighborDependentTorsionSamplingKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::NeighborDependentTorsionSamplingKinematicPerturber
- ~NeighborList()
: core::scoring::NeighborList
- ~NeighborTypeFilter()
: protocols::simple_filters::NeighborTypeFilter
- ~NestedEnergyTermDDGMutationOptEData()
: protocols::optimize_weights::NestedEnergyTermDDGMutationOptEData
- ~NestedEnergyTermPNatAAOptEPositionData()
: protocols::optimize_weights::NestedEnergyTermPNatAAOptEPositionData
- ~NMerPSSMEnergy()
: core::scoring::methods::NMerPSSMEnergy
- ~NMerPSSMEnergyFilter()
: protocols::simple_filters::NMerPSSMEnergyFilter
- ~NMerRefEnergy()
: core::scoring::methods::NMerRefEnergy
- ~Node()
: core::graph::Node
, core::kinematics::Node
- ~NodeBase()
: core::pack::interaction_graph::NodeBase
- ~NoesyModule()
: protocols::noesy_assign::NoesyModule
- ~NonlocalContactsCalculator()
: protocols::toolbox::pose_metric_calculators::NonlocalContactsCalculator
- ~NonlocalPair()
: protocols::frag_picker::nonlocal::NonlocalPair
- ~NonResidueTypeConstraint()
: core::scoring::constraints::NonResidueTypeConstraint
- ~NonSequentialNeighborsFilter()
: protocols::simple_filters::NonSequentialNeighborsFilter
- ~NoRepackDisulfides()
: core::pack::task::operation::NoRepackDisulfides
- ~NormalizedEvaluatedArchive()
: protocols::jd2::archive::NormalizedEvaluatedArchive
- ~NPDPropCalculator()
: protocols::pack_daemon::NPDPropCalculator
- ~NPDPropCalculatorCreator()
: protocols::pack_daemon::NPDPropCalculatorCreator
- ~NtoC_RCG()
: protocols::forge::constraints::NtoC_RCG
- ~NullDesignMover()
: protocols::protein_interface_design::movers::NullDesignMover
- ~NullMover()
: protocols::moves::NullMover
- ~NumDerivCheckData()
: core::optimization::NumDerivCheckData
- ~NumericalDerivCheckResult()
: core::optimization::NumericalDerivCheckResult
- ~NumNeighborsMPM()
: protocols::match::NumNeighborsMPM
- ~NVlookup()
: core::scoring::nv::NVlookup
- ~NWAligner()
: core::sequence::NWAligner
- ~O2M_MutateMover()
: protocols::simple_moves::O2M_MutateMover
- ~ObserverCache()
: core::pose::datacache::ObserverCache
- ~Obsolet_NamedAtomPairConstraint()
: core::scoring::constraints::Obsolet_NamedAtomPairConstraint
- ~OccupiedSpaceHash()
: protocols::match::OccupiedSpaceHash
- ~OmegaTether()
: core::scoring::OmegaTether
- ~OneBodyEnergy()
: core::scoring::methods::OneBodyEnergy
- ~OneToAllEnergyContainer()
: core::scoring::OneToAllEnergyContainer
- ~OneToAllNeighborConstIterator()
: core::scoring::OneToAllNeighborConstIterator
- ~OneToAllNeighborIterator()
: core::scoring::OneToAllNeighborIterator
- ~OnTheFlyEdge()
: core::pack::interaction_graph::OnTheFlyEdge
- ~OnTheFlyInteractionGraph()
: core::pack::interaction_graph::OnTheFlyInteractionGraph
- ~OnTheFlyNode()
: core::pack::interaction_graph::OnTheFlyNode
- ~OopDPuckMinusMover()
: protocols::simple_moves::oop::OopDPuckMinusMover
- ~OopDPuckPlusMover()
: protocols::simple_moves::oop::OopDPuckPlusMover
- ~OopMover()
: protocols::simple_moves::oop::OopMover
- ~OopPatcher()
: protocols::simple_moves::oop::OopPatcher
- ~OopPuckMinusMover()
: protocols::simple_moves::oop::OopPuckMinusMover
- ~OopPuckPlusMover()
: protocols::simple_moves::oop::OopPuckPlusMover
- ~OopRandomPuckMover()
: protocols::simple_moves::oop::OopRandomPuckMover
- ~OopRandomSmallMover()
: protocols::simple_moves::oop::OopRandomSmallMover
- ~OP_const_iterator()
: protocols::toolbox::OP_const_iterator< const_iterator, SomeOP >
- ~OperateOnCertainResidues()
: core::pack::task::operation::OperateOnCertainResidues
- ~Operator()
: protocols::simple_filters::Operator
- ~OptCysHG()
: core::pack::task::operation::OptCysHG
- ~OptEData()
: protocols::optimize_weights::OptEData
- ~OptEMultifunc()
: protocols::optimize_weights::OptEMultifunc
- ~OptEPositionData()
: protocols::optimize_weights::OptEPositionData
- ~OptH()
: core::pack::task::operation::OptH
- ~OrbitalsFeatures()
: protocols::features::OrbitalsFeatures
- ~OrbitalsFeaturesCreator()
: protocols::features::OrbitalsFeaturesCreator
- ~OrbitalTypeMapper()
: core::chemical::orbitals::OrbitalTypeMapper
- ~OrbitalTypeSet()
: core::chemical::orbitals::OrbitalTypeSet
- ~OrbitalXYZCoords()
: core::conformation::orbitals::OrbitalXYZCoords
- ~OrderedFragSet()
: core::fragment::OrderedFragSet
- ~OriginalBackboneBuildPoint()
: protocols::match::upstream::OriginalBackboneBuildPoint
- ~OTFFlexbbEdge()
: protocols::flexpack::interaction_graph::OTFFlexbbEdge
- ~OTFFlexbbInteractionGraph()
: protocols::flexpack::interaction_graph::OTFFlexbbInteractionGraph
- ~OTFFlexbbNode()
: protocols::flexpack::interaction_graph::OTFFlexbbNode
- ~OtherContextScoreFunction()
: protocols::flexpack::OtherContextScoreFunction
- ~Outputter()
: protocols::outputter::Outputter
- ~OutputWriter()
: protocols::match::output::OutputWriter
- ~P_AA()
: core::scoring::P_AA
- ~PackDaemon()
: protocols::pack_daemon::PackDaemon
- ~PackerNeighborGraphFilter()
: protocols::simple_filters::PackerNeighborGraphFilter
- ~PackerTask()
: core::pack::task::PackerTask
- ~PackerTask_()
: core::pack::task::PackerTask_
- ~PackingState()
: protocols::multistate_design::PackingState
- ~PackRotamersMover()
: protocols::simple_moves::PackRotamersMover
- ~PackRotamersMoverLazy()
: protocols::simple_moves::PackRotamersMoverLazy
- ~PackRotamersMoverPartGreedy()
: protocols::enzdes::PackRotamersMoverPartGreedy
- ~PackStatFilter()
: protocols::simple_filters::PackStatFilter
- ~PairFeatures()
: protocols::features::PairFeatures
- ~PairFeaturesCreator()
: protocols::features::PairFeaturesCreator
- ~PairingStatistics()
: protocols::abinitio::PairingStatistics
- ~PairScoringScheme()
: core::sequence::PairScoringScheme
- ~PalesEvaluatorCreator()
: protocols::simple_filters::PalesEvaluatorCreator
- ~ParallelBetaPairingPreferenceFilter()
: protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter
- ~ParallelTempering()
: protocols::canonical_sampling::ParallelTempering
- ~ParetoOptMutationMover()
: protocols::design_opt::ParetoOptMutationMover
- ~ParsedProtocol()
: protocols::rosetta_scripts::ParsedProtocol
- ~Parser()
: protocols::jd2::Parser
- ~ParserJobInputter()
: protocols::protein_interface_design::ParserJobInputter
- ~PartialSecondarySimilarity()
: protocols::frag_picker::scores::PartialSecondarySimilarity
- ~PartialThreadingMover()
: protocols::comparative_modeling::PartialThreadingMover
- ~Particle()
: core::optimization::Particle
- ~ParticleSwarmMinimizer()
: core::optimization::ParticleSwarmMinimizer
- ~PartitionAggregateFunction()
: protocols::multistate_design::PartitionAggregateFunction< T >
- ~Patch()
: core::chemical::Patch
- ~PatchCase()
: core::chemical::PatchCase
- ~PatchdockReader()
: protocols::protein_interface_design::PatchdockReader
- ~PatchOperation()
: core::chemical::PatchOperation
- ~PBLifetimeCache()
: core::scoring::methods::PBLifetimeCache
- ~PCA()
: protocols::evaluation::PCA
- ~PCluster()
: protocols::pockets::PCluster
- ~PCS_data()
: protocols::scoring::methods::pcs::PCS_data
- ~PCS_data_input()
: protocols::scoring::methods::pcs::PCS_data_input
- ~PCS_data_per_lanthanides()
: protocols::scoring::methods::pcs::PCS_data_per_lanthanides
- ~PCS_Energy()
: protocols::scoring::methods::pcs::PCS_Energy
- ~PCS_file_data()
: protocols::scoring::methods::pcs::PCS_file_data
- ~PCS_line_data()
: protocols::scoring::methods::pcs::PCS_line_data
- ~PCS_tensor()
: protocols::scoring::methods::pcs::PCS_tensor
- ~PcsDataCenter()
: protocols::scoring::methods::pcs2::PcsDataCenter
- ~PcsDataCenterManager()
: protocols::scoring::methods::pcs2::PcsDataCenterManager
- ~PcsDataLanthanide()
: protocols::scoring::methods::pcs2::PcsDataLanthanide
- ~PcsEnergy()
: protocols::scoring::methods::pcs2::PcsEnergy
- ~PcsEnergyController()
: protocols::topology_broker::PcsEnergyController
- ~PcsEnergyParameter()
: protocols::scoring::methods::pcs2::PcsEnergyParameter
- ~PcsEnergyParameterManager()
: protocols::scoring::methods::pcs2::PcsEnergyParameterManager
- ~PcsGridSearchParameter()
: protocols::scoring::methods::pcs2::PcsGridSearchParameter
- ~PcsInputCenter()
: protocols::scoring::methods::pcs2::PcsInputCenter
- ~PcsInputFile()
: protocols::scoring::methods::pcs2::PcsInputFile
- ~PcsInputLine()
: protocols::scoring::methods::pcs2::PcsInputLine
- ~PcsTensor()
: protocols::scoring::methods::pcs2::PcsTensor
- ~PDB_DReaderOptions()
: core::io::pdb::PDB_DReaderOptions
- ~PdbDataFeatures()
: protocols::features::PdbDataFeatures
- ~PdbDataFeaturesCreator()
: protocols::features::PdbDataFeaturesCreator
- ~PDBDumpMover()
: protocols::moves::PDBDumpMover
- ~PDBInfo()
: core::pose::PDBInfo
- ~PDBInputter()
: protocols::inputter::PDBInputter
- ~PDBJobInputter()
: protocols::jd2::PDBJobInputter
- ~PDBJobOutputter()
: protocols::jd2::PDBJobOutputter
- ~PDBOutput()
: protocols::dna::PDBOutput
- ~PDBOutputter()
: protocols::outputter::PDBOutputter
- ~PDBPoseInputStream()
: core::import_pose::pose_stream::PDBPoseInputStream
- ~PDBPoseMap()
: core::pose::PDBPoseMap
- ~PDBReloadMover()
: protocols::simple_moves::PDBReloadMover
- ~PDBSilentStruct()
: core::import_pose::PDBSilentStruct
- ~PDBSilentStructCreator()
: core::import_pose::PDBSilentStructCreator
- ~PDBTrajectoryRecorder()
: protocols::canonical_sampling::PDBTrajectoryRecorder
- ~PDBWriter()
: protocols::match::output::PDBWriter
- ~PDDFEnergy()
: protocols::scoring::methods::saxs::PDDFEnergy
- ~PDDFScoreFilter()
: protocols::simple_filters::PDDFScoreFilter
- ~PDEdge()
: core::pack::interaction_graph::PDEdge
- ~PDNode()
: core::pack::interaction_graph::PDNode
- ~PeakAssignment()
: protocols::noesy_assign::PeakAssignment
- ~PeakAssignmentResidueMap()
: protocols::noesy_assign::PeakAssignmentResidueMap
- ~PeakCalibrator()
: protocols::noesy_assign::PeakCalibrator
- ~PeakCalibratorMap()
: protocols::noesy_assign::PeakCalibratorMap
- ~PeakFileFormat()
: protocols::noesy_assign::PeakFileFormat
- ~PeakFileFormat_Base()
: protocols::noesy_assign::PeakFileFormat_Base
- ~PeptideBondedEnergyContainer()
: core::scoring::PeptideBondedEnergyContainer
- ~PeptideBondedNeighborConstIterator()
: core::scoring::PeptideBondedNeighborConstIterator
- ~PeptideBondedNeighborIterator()
: core::scoring::PeptideBondedNeighborIterator
- ~PeptideStapleDesignMover()
: protocols::protein_interface_design::movers::PeptideStapleDesignMover
- ~PerNativeRRReporterHuman()
: protocols::rotamer_recovery::PerNativeRRReporterHuman
- ~Phi()
: protocols::frag_picker::scores::Phi
- ~PlaceFragments()
: protocols::seeded_abinitio::PlaceFragments
- ~PlacementAuctionMover()
: protocols::protein_interface_design::movers::PlacementAuctionMover
- ~PlacementMinimizationMover()
: protocols::protein_interface_design::movers::PlacementMinimizationMover
- ~PlaceOnLoop()
: protocols::protein_interface_design::movers::PlaceOnLoop
- ~PlaceSimultaneouslyMover()
: protocols::protein_interface_design::movers::PlaceSimultaneouslyMover
- ~PlaceStubMover()
: protocols::protein_interface_design::movers::PlaceStubMover
- ~PlainPdbJobDistributor()
: protocols::jobdist::PlainPdbJobDistributor
- ~PlainRawJobDistributor()
: protocols::jobdist::PlainRawJobDistributor
- ~PlainSilentFileJobDistributor()
: protocols::jobdist::PlainSilentFileJobDistributor
- ~PNatAAOptEPositionData()
: protocols::optimize_weights::PNatAAOptEPositionData
- ~PNatAAOptERotamerData()
: protocols::optimize_weights::PNatAAOptERotamerData
- ~PNatLigPoseOptEData()
: protocols::optimize_weights::PNatLigPoseOptEData
- ~PNatRotOptEPositionData()
: protocols::optimize_weights::PNatRotOptEPositionData
- ~PNatRotOptERotamerData()
: protocols::optimize_weights::PNatRotOptERotamerData
- ~PNatStructureOptEData()
: protocols::optimize_weights::PNatStructureOptEData
- ~PocketConstraint()
: protocols::pockets::PocketConstraint
- ~PocketConstraintCreator()
: protocols::pockets::PocketConstraintCreator
- ~PocketGrid()
: protocols::pockets::PocketGrid
- ~PointMutationCalculator()
: protocols::design_opt::PointMutationCalculator
- ~PointMutScanDriver()
: protocols::pmut_scan::PointMutScanDriver
- ~PoissonBoltzmannPotential()
: core::scoring::PoissonBoltzmannPotential
- ~Pool_ConvergenceCheck()
: protocols::canonical_sampling::mc_convergence_checks::Pool_ConvergenceCheck
- ~Pool_Evaluator()
: protocols::canonical_sampling::mc_convergence_checks::Pool_Evaluator
- ~Pool_RMSD()
: protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
- ~PoolEvaluatorCreator()
: protocols::simple_filters::PoolEvaluatorCreator
- ~Pose()
: core::pose::Pose
- ~PoseBalls()
: core::scoring::packing::PoseBalls
- ~PoseBallsLite()
: core::scoring::packing::PoseBallsLite
- ~PoseCommentsFeatures()
: protocols::features::PoseCommentsFeatures
- ~PoseCommentsFeaturesCreator()
: protocols::features::PoseCommentsFeaturesCreator
- ~PoseCondition()
: protocols::moves::PoseCondition
- ~PoseConformationFeatures()
: protocols::features::PoseConformationFeatures
- ~PoseConformationFeaturesCreator()
: protocols::features::PoseConformationFeaturesCreator
- ~PoseEvaluator()
: protocols::evaluation::PoseEvaluator
- ~PoseFilter()
: protocols::swa::PoseFilter
- ~PoseFoundResiduesCombination()
: protocols::enzdes::PoseFoundResiduesCombination
- ~PoseFromPDBLoader()
: core::import_pose::PoseFromPDBLoader
- ~PoseInfoFilter()
: protocols::simple_filters::PoseInfoFilter
- ~PoseInputStream()
: core::import_pose::pose_stream::PoseInputStream
- ~PoseInputStreamJobInputter()
: protocols::jd2::PoseInputStreamJobInputter
- ~PoseInserter()
: protocols::match::output::PoseInserter
- ~PoseMatchOutputWriter()
: protocols::match::output::PoseMatchOutputWriter
- ~PoseMetricContainer()
: core::pose::metrics::PoseMetricContainer
- ~PoseOutputStream()
: core::import_pose::pose_stream::PoseOutputStream
- ~PositionDdGInfo()
: core::io::PositionDdGInfo::PositionDdGInfo
- ~PositionSpecificRandomizer()
: protocols::genetic_algorithm::PositionSpecificRandomizer
- ~PosType()
: protocols::multistate_design::PosType
- ~PosTypeCreator()
: protocols::multistate_design::PosTypeCreator
- ~PowExpression()
: protocols::pack_daemon::PowExpression
- ~PQR()
: core::scoring::PQR
- ~PrecomputedPairEnergiesEdge()
: core::pack::interaction_graph::PrecomputedPairEnergiesEdge
- ~PrecomputedPairEnergiesInteractionGraph()
: core::pack::interaction_graph::PrecomputedPairEnergiesInteractionGraph
- ~PrecomputedPairEnergiesNode()
: core::pack::interaction_graph::PrecomputedPairEnergiesNode
- ~PredesignPerturbMover()
: protocols::enzdes::PredesignPerturbMover
- ~Predicate()
: core::scoring::Predicate
- ~PredictedBurialEvaluator()
: protocols::simple_filters::PredictedBurialEvaluator
- ~PredictedBurialFnEvaluatorCreator()
: protocols::simple_filters::PredictedBurialFnEvaluatorCreator
- ~PrepackMover()
: protocols::protein_interface_design::movers::PrepackMover
- ~PreserveCBeta()
: core::pack::task::operation::PreserveCBeta
- ~PreventChainFromRepackingOperation()
: protocols::toolbox::task_operations::PreventChainFromRepackingOperation
- ~PreventRepacking()
: core::pack::task::operation::PreventRepacking
- ~PreventRepackingRLT()
: core::pack::task::operation::PreventRepackingRLT
- ~PreventResiduesFromRepackingOperation()
: protocols::toolbox::task_operations::PreventResiduesFromRepackingOperation
- ~ProcessorFactory()
: protocols::match::output::ProcessorFactory
- ~ProClosureEnergy()
: core::scoring::methods::ProClosureEnergy
- ~ProfilerMover()
: protocols::moves::ProfilerMover
- ~ProfileScore()
: protocols::frag_picker::scores::ProfileScore
- ~ProfileScoreBlosum62()
: protocols::frag_picker::scores::ProfileScoreBlosum62
- ~ProfileScoreL1()
: protocols::frag_picker::scores::ProfileScoreL1
- ~ProfileScoreStructL1()
: protocols::frag_picker::scores::ProfileScoreStructL1
- ~ProfileScoreSubMatrix()
: protocols::frag_picker::scores::ProfileScoreSubMatrix
- ~ProfSimScoringScheme()
: core::sequence::ProfSimScoringScheme
- ~ProlineFixMover()
: protocols::simple_moves::ProlineFixMover
- ~ProteinBackboneAtomAtomPairFeatures()
: protocols::features::ProteinBackboneAtomAtomPairFeatures
- ~ProteinBackboneAtomAtomPairFeaturesCreator()
: protocols::features::ProteinBackboneAtomAtomPairFeaturesCreator
- ~ProteinBackboneBuildPoint()
: protocols::match::upstream::ProteinBackboneBuildPoint
- ~ProteinBackboneTorsionAngleFeatures()
: protocols::features::ProteinBackboneTorsionAngleFeatures
- ~ProteinBackboneTorsionAngleFeaturesCreator()
: protocols::features::ProteinBackboneTorsionAngleFeaturesCreator
- ~ProteinBondGeometryFeatures()
: protocols::features::ProteinBondGeometryFeatures
- ~ProteinBondGeometryFeaturesCreator()
: protocols::features::ProteinBondGeometryFeaturesCreator
- ~ProteinInterfaceDesignOperation()
: protocols::toolbox::task_operations::ProteinInterfaceDesignOperation
- ~ProteinInterfaceMultiStateDesignMover()
: protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover
- ~ProteinLigandInterfaceUpweighter()
: protocols::enzdes::ProteinLigandInterfaceUpweighter
- ~ProteinResidueConformationFeatures()
: protocols::features::ProteinResidueConformationFeatures
- ~ProteinResidueConformationFeaturesCreator()
: protocols::features::ProteinResidueConformationFeaturesCreator
- ~ProteinRMSDFeatures()
: protocols::features::ProteinRMSDFeatures
- ~ProteinRMSDFeaturesCreator()
: protocols::features::ProteinRMSDFeaturesCreator
- ~ProteinSCSampler()
: protocols::match::upstream::ProteinSCSampler
- ~ProteinSilentReport()
: protocols::features::ProteinSilentReport
- ~ProteinSilentStruct_SinglePrecCreator()
: core::io::silent::ProteinSilentStruct_SinglePrecCreator
- ~ProteinSilentStruct_Template()
: core::io::silent::ProteinSilentStruct_Template< T >
- ~ProteinSilentStructCreator()
: core::io::silent::ProteinSilentStructCreator
- ~ProteinUpstreamBuilder()
: protocols::match::upstream::ProteinUpstreamBuilder
- ~Protocol()
: protocols::abinitio::Protocol
- ~ProtocolFeatures()
: protocols::features::ProtocolFeatures
- ~ProtocolFeaturesCreator()
: protocols::features::ProtocolFeaturesCreator
- ~PseudoBond()
: core::conformation::PseudoBond
- ~PseudoBondCollection()
: core::conformation::PseudoBondCollection
- ~Psi()
: protocols::frag_picker::scores::Psi
- ~PSSMOptEPositionData()
: protocols::optimize_weights::PSSMOptEPositionData
- ~PyMolMover()
: protocols::moves::PyMolMover
- ~PyMolObserver()
: protocols::moves::PyMolObserver
- ~qsarMap()
: protocols::qsar::qsarMap
- ~qsarOptFunc()
: protocols::qsar::qsarOptFunc
- ~qsarPoint()
: protocols::qsar::qsarPoint
- ~QuickRepacker()
: protocols::pack_daemon::QuickRepacker
- ~QuotaPool()
: protocols::frag_picker::quota::QuotaPool
- ~QuotaSelector()
: protocols::frag_picker::quota::QuotaSelector
- ~R_PARAM()
: core::scoring::APBSConfig::R_PARAM
- ~RadiusOfGyrationFeatures()
: protocols::features::RadiusOfGyrationFeatures
- ~RadiusOfGyrationFeaturesCreator()
: protocols::features::RadiusOfGyrationFeaturesCreator
- ~Ramachandran()
: core::scoring::Ramachandran
- ~Ramachandran2B()
: core::scoring::Ramachandran2B
- ~RampingFunc()
: protocols::moves::RampingFunc
- ~RampingMover()
: protocols::moves::RampingMover
- ~RandomConformerMover()
: protocols::ligand_docking::RandomConformerMover
- ~RandomConformers()
: protocols::ligand_docking::RandomConformers
- ~RandomMutation()
: protocols::protein_interface_design::movers::RandomMutation
- ~RangeFilter()
: protocols::simple_filters::RangeFilter
- ~RawFileData()
: core::io::raw_data::RawFileData
- ~RawStruct()
: core::io::raw_data::RawStruct
- ~RBSegmentRelax()
: protocols::rbsegment_relax::RBSegmentRelax
- ~RBSegmentRelaxImpl()
: protocols::RBSegmentRelaxImpl
- ~RdcEvaluatorCreator()
: protocols::simple_filters::RdcEvaluatorCreator
- ~RdcSelectEvaluatorCreator()
: protocols::simple_filters::RdcSelectEvaluatorCreator
- ~RdcTargetEvaluatorCreator()
: protocols::simple_filters::RdcTargetEvaluatorCreator
- ~ReadResfile()
: core::pack::task::operation::ReadResfile
- ~ReadResfileAndObeyLengthEvents()
: core::pack::task::operation::ReadResfileAndObeyLengthEvents
- ~ReadResfileFromDB()
: protocols::toolbox::task_operations::ReadResfileFromDB
- ~ReferenceEnergy()
: core::scoring::methods::ReferenceEnergy
- ~ReferenceEnergyNoncanonical()
: core::scoring::methods::ReferenceEnergyNoncanonical
- ~RefineBetaBarrel()
: protocols::antibody2::RefineBetaBarrel
- ~RefineOneCDRLoop()
: protocols::antibody2::RefineOneCDRLoop
- ~RefineOneCDRLoopCentroid()
: protocols::antibody2::RefineOneCDRLoopCentroid
- ~Region()
: protocols::nonlocal::Region
- ~RelativeConnectRight()
: protocols::forge::build::RelativeConnectRight
- ~RelativePoseFilter()
: protocols::simple_filters::RelativePoseFilter
- ~RelativeSegmentFilter()
: protocols::protein_interface_design::filters::RelativeSegmentFilter
- ~RelativeSequencePosition()
: protocols::forge::build::RelativeSequencePosition
- ~RelaxProtocolBase()
: protocols::relax::RelaxProtocolBase
- ~RemodelAccumulator()
: protocols::forge::remodel::RemodelAccumulator
- ~RemodelConstraintGenerator()
: protocols::forge::remodel::RemodelConstraintGenerator
- ~RemodelDesignMover()
: protocols::forge::remodel::RemodelDesignMover
- ~RemodelEnzdesCstModule()
: protocols::forge::remodel::RemodelEnzdesCstModule
- ~RemodelLoopMover()
: protocols::forge::remodel::RemodelLoopMover
- ~RemodelMover()
: protocols::forge::remodel::RemodelMover
- ~RemodelRotamerLinks()
: protocols::forge::remodel::RemodelRotamerLinks
- ~RemoveCsts()
: protocols::forge::constraints::RemoveCsts
- ~RemoveNorCTermMPM()
: protocols::match::RemoveNorCTermMPM
- ~RenderGridsToKinemage()
: protocols::qsar::RenderGridsToKinemage
- ~RepackLigandSiteWithoutLigandMover()
: protocols::enzdes::RepackLigandSiteWithoutLigandMover
- ~RepackMinimize()
: protocols::protein_interface_design::movers::RepackMinimize
- ~RepackTrial()
: protocols::loops::loop_mover::refine::RepackTrial
- ~RepackTrialCreator()
: protocols::loops::loop_mover::refine::RepackTrialCreator
- ~RepackWithoutLigandFilter()
: protocols::enzdes::RepackWithoutLigandFilter
- ~RepeatMover()
: protocols::moves::RepeatMover
- ~ReplicaExchangeMC()
: protocols::moves::ReplicaExchangeMC
- ~ReplicateFilter()
: protocols::filters::ReplicateFilter
- ~ReplicateTask()
: core::pack::task::operation::ReplicateTask
- ~Report()
: protocols::features::Report
- ~ReportFilter()
: protocols::simple_filters::ReportFilter
- ~ReportPSSMDifferences()
: protocols::protein_interface_design::ReportPSSMDifferences
- ~ReportSequenceDifferences()
: protocols::protein_interface_design::ReportSequenceDifferences
- ~ReportToDB()
: protocols::features::ReportToDB
- ~RepulsiveOnlyMover()
: protocols::simple_moves::RepulsiveOnlyMover
- ~ResfileCommand()
: core::pack::task::ResfileCommand
- ~ResfileContents()
: core::pack::task::ResfileContents
- ~ResFileOutputter()
: protocols::outputter::ResFileOutputter
- ~ResFilterFactory()
: core::pack::task::operation::ResFilterFactory
- ~ResId()
: protocols::moves::ResId
- ~ResidualDipolarCoupling()
: core::scoring::ResidualDipolarCoupling
- ~Residue()
: core::conformation::Residue
- ~ResidueAtomTreeCollection()
: core::pack::scmin::ResidueAtomTreeCollection
- ~ResidueAtomTreeCollectionMomento()
: core::pack::scmin::ResidueAtomTreeCollectionMomento
- ~ResidueBBDofs()
: protocols::protein_interface_design::movers::ResidueBBDofs
- ~ResidueBurialFeatures()
: protocols::features::ResidueBurialFeatures
- ~ResidueBurialFeaturesCreator()
: protocols::features::ResidueBurialFeaturesCreator
- ~ResidueBurialFilter()
: protocols::simple_filters::ResidueBurialFilter
- ~ResidueCartBondedParameters()
: core::scoring::methods::ResidueCartBondedParameters
- ~ResidueConformationFeatures()
: protocols::features::ResidueConformationFeatures
- ~ResidueConformationFeaturesCreator()
: protocols::features::ResidueConformationFeaturesCreator
- ~ResidueConstraints()
: core::scoring::constraints::ResidueConstraints
- ~ResidueCoordinateChangeList()
: core::kinematics::ResidueCoordinateChangeList
- ~ResidueCountFilter()
: protocols::simple_filters::ResidueCountFilter
- ~ResidueDatabaseIO()
: core::chemical::ResidueDatabaseIO
- ~ResidueDistanceFilter()
: protocols::simple_filters::ResidueDistanceFilter
- ~ResidueFeature()
: protocols::comparative_modeling::features::ResidueFeature
- ~ResidueFeatures()
: protocols::features::ResidueFeatures
- ~ResidueFeaturesCreator()
: protocols::features::ResidueFeaturesCreator
- ~ResidueGridScoresFeatures()
: protocols::features::ResidueGridScoresFeatures
- ~ResidueGridScoresFeaturesCreator()
: protocols::features::ResidueGridScoresFeaturesCreator
- ~ResidueIEFilter()
: protocols::simple_filters::ResidueIEFilter
- ~ResidueKinWriter()
: core::conformation::ResidueKinWriter
- ~ResidueLevelTask()
: core::pack::task::ResidueLevelTask
- ~ResidueLevelTask_()
: core::pack::task::ResidueLevelTask_
- ~ResidueLoader()
: core::chemical::ResidueLoader
- ~ResidueLoaderOptions()
: core::chemical::ResidueLoaderOptions
- ~ResidueMatcher()
: core::conformation::ResidueMatcher
- ~ResidueNblistData()
: core::scoring::ResidueNblistData
- ~ResidueNeighborConstIterator()
: core::scoring::ResidueNeighborConstIterator
- ~ResidueNeighborIterator()
: core::scoring::ResidueNeighborIterator
- ~ResiduePairJump()
: protocols::jumping::ResiduePairJump
- ~ResiduePairJumpSingle()
: protocols::jumping::ResiduePairJumpSingle
- ~ResiduePairNeighborList()
: core::scoring::ResiduePairNeighborList
- ~ResiduePairXYZ()
: core::scoring::constraints::ResiduePairXYZ
- ~ResidueScoresFeatures()
: protocols::features::ResidueScoresFeatures
- ~ResidueScoresFeaturesCreator()
: protocols::features::ResidueScoresFeaturesCreator
- ~ResidueSecondaryStructureFeatures()
: protocols::features::ResidueSecondaryStructureFeatures
- ~ResidueSecondaryStructureFeaturesCreator()
: protocols::features::ResidueSecondaryStructureFeaturesCreator
- ~ResidueSelector()
: core::chemical::ResidueSelector
- ~ResidueSelectorSingle()
: core::chemical::ResidueSelectorSingle
- ~ResidueSetChainEnergyFilter()
: protocols::simple_filters::ResidueSetChainEnergyFilter
- ~ResiduesInInterfaceFilter()
: protocols::simple_filters::ResiduesInInterfaceFilter
- ~ResidueTorsionRestraints()
: protocols::ligand_docking::ResidueTorsionRestraints
- ~ResidueTotalScoresFeatures()
: protocols::features::ResidueTotalScoresFeatures
- ~ResidueTotalScoresFeaturesCreator()
: protocols::features::ResidueTotalScoresFeaturesCreator
- ~ResidueType()
: core::chemical::ResidueType
- ~ResidueTypeConstraint()
: core::scoring::constraints::ResidueTypeConstraint
- ~ResidueTypeLinkingConstraint()
: core::scoring::constraints::ResidueTypeLinkingConstraint
- ~ResidueTypeSet()
: core::chemical::ResidueTypeSet
- ~ResidueTypesFeatures()
: protocols::features::ResidueTypesFeatures
- ~ResidueTypesFeaturesCreator()
: protocols::features::ResidueTypesFeaturesCreator
- ~ResidueVicinityInfo()
: protocols::forge::remodel::ResidueVicinityInfo
- ~ResidueVicinityRCG()
: protocols::forge::remodel::ResidueVicinityRCG
- ~ResidueXYZ()
: core::scoring::constraints::ResidueXYZ
- ~ResInteractions()
: protocols::toolbox::match_enzdes_util::ResInteractions
- ~ResLvlTaskOperationCreator()
: core::pack::task::operation::ResLvlTaskOperationCreator
- ~ResLvlTaskOperationFactory()
: core::pack::task::operation::ResLvlTaskOperationFactory
- ~ResolutionSwitcher()
: protocols::abinitio::ResolutionSwitcher
- ~Resonance()
: protocols::noesy_assign::Resonance
- ~ResonanceList()
: protocols::noesy_assign::ResonanceList
- ~RespairInteractions()
: core::scoring::custom_pair_distance::RespairInteractions
- ~ResPairMinimizationData()
: core::scoring::ResPairMinimizationData
- ~ResRangePredicate()
: core::scoring::ResRangePredicate
- ~ResResEnergyInvoker()
: core::scoring::etable::ResResEnergyInvoker< Evaluator >
- ~ResSingleMinimizationData()
: core::scoring::ResSingleMinimizationData
- ~RestrictAbsentCanonicalAAS()
: core::pack::task::operation::RestrictAbsentCanonicalAAS
- ~RestrictAbsentCanonicalAASRLT()
: core::pack::task::operation::RestrictAbsentCanonicalAASRLT
- ~RestrictByCalculatorsOperation()
: protocols::toolbox::task_operations::RestrictByCalculatorsOperation
- ~RestrictChainToRepackingOperation()
: protocols::toolbox::task_operations::RestrictChainToRepackingOperation
- ~RestrictConservedLowDdgOperation()
: protocols::toolbox::task_operations::RestrictConservedLowDdgOperation
- ~RestrictDesignToProteinDNAInterface()
: protocols::dna::RestrictDesignToProteinDNAInterface
- ~RestrictIdentitiesAtAlignedPositionsOperation()
: protocols::toolbox::task_operations::RestrictIdentitiesAtAlignedPositionsOperation
- ~RestrictInterGroupVectorOperation()
: protocols::toolbox::task_operations::RestrictInterGroupVectorOperation
- ~RestrictNativeResiduesOperation()
: protocols::toolbox::task_operations::RestrictNativeResiduesOperation
- ~RestrictNonSurfaceToRepackingOperation()
: protocols::toolbox::task_operations::RestrictNonSurfaceToRepackingOperation
- ~RestrictOperationsBase()
: protocols::toolbox::task_operations::RestrictOperationsBase
- ~RestrictResiduesToRepackingOperation()
: protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation
- ~RestrictResidueToRepacking()
: core::pack::task::operation::RestrictResidueToRepacking
- ~RestrictToAlignedSegmentsOperation()
: protocols::toolbox::task_operations::RestrictToAlignedSegmentsOperation
- ~RestrictToCDRH3Loop()
: protocols::toolbox::task_operations::RestrictToCDRH3Loop
- ~RestrictToInterface()
: protocols::toolbox::task_operations::RestrictToInterface
, core::pack::task::operation::RestrictToInterface
- ~RestrictToInterfaceOperation()
: protocols::toolbox::task_operations::RestrictToInterfaceOperation
- ~RestrictToInterfaceVectorOperation()
: protocols::toolbox::task_operations::RestrictToInterfaceVectorOperation
- ~RestrictToLoopsAndNeighbors()
: protocols::toolbox::task_operations::RestrictToLoopsAndNeighbors
- ~RestrictToNeighborhoodOperation()
: protocols::toolbox::task_operations::RestrictToNeighborhoodOperation
- ~RestrictToRepacking()
: core::pack::task::operation::RestrictToRepacking
- ~RestrictToRepackingRLT()
: core::pack::task::operation::RestrictToRepackingRLT
- ~RestrictToTerminiOperation()
: protocols::toolbox::task_operations::RestrictToTerminiOperation
- ~RestrictYSDesign()
: core::pack::task::operation::RestrictYSDesign
- ~ReturnSidechainMover()
: protocols::simple_moves::ReturnSidechainMover
- ~Reversion()
: protocols::dna::Reversion
- ~Revert()
: protocols::protein_interface_design::Revert
- ~RGFilter()
: protocols::simple_filters::RGFilter
- ~RigidBodyDeterministicSpinMover()
: protocols::rigid::RigidBodyDeterministicSpinMover
- ~RigidBodyDofPerturbMover()
: protocols::rigid::RigidBodyDofPerturbMover
- ~RigidBodyDofRandomizeMover()
: protocols::rigid::RigidBodyDofRandomizeMover
- ~RigidBodyDofRandomTransMover()
: protocols::rigid::RigidBodyDofRandomTransMover
- ~RigidBodyDofSeqPerturbMover()
: protocols::rigid::RigidBodyDofSeqPerturbMover
- ~RigidBodyDofSeqRandomizeMover()
: protocols::rigid::RigidBodyDofSeqRandomizeMover
- ~RigidBodyDofSeqTransMover()
: protocols::rigid::RigidBodyDofSeqTransMover
- ~RigidBodyDofTransMover()
: protocols::rigid::RigidBodyDofTransMover
- ~RigidBodyInfo()
: protocols::docking::RigidBodyInfo
- ~RigidBodyMover()
: protocols::rigid::RigidBodyMover
- ~RigidBodyPerturbMover()
: protocols::rigid::RigidBodyPerturbMover
- ~RigidBodyPerturbNoCenterMover()
: protocols::rigid::RigidBodyPerturbNoCenterMover
- ~RigidBodyRandomizeMover()
: protocols::rigid::RigidBodyRandomizeMover
- ~RigidBodySampler()
: protocols::swa::RigidBodySampler
- ~RigidBodySpinMover()
: protocols::rigid::RigidBodySpinMover
- ~RigidBodyTransMover()
: protocols::rigid::RigidBodyTransMover
- ~RigidLigandBuilder()
: protocols::match::downstream::RigidLigandBuilder
- ~RigidScore()
: protocols::sic_dock::RigidScore
- ~RigidSearchMover()
: protocols::ligand_docking::RigidSearchMover
- ~RingConformationMover()
: protocols::simple_moves::carbohydrates::RingConformationMover
- ~RmsdEvaluator()
: protocols::simple_filters::RmsdEvaluator
- ~RmsdEvaluatorCreator()
: protocols::simple_filters::RmsdEvaluatorCreator
- ~RmsdFilter()
: protocols::protein_interface_design::filters::RmsdFilter
- ~RmsdTargetEvaluatorCreator()
: protocols::simple_filters::RmsdTargetEvaluatorCreator
- ~RNA_AddMover()
: protocols::swa::monte_carlo::RNA_AddMover
- ~RNA_AddOrDeleteMover()
: protocols::swa::monte_carlo::RNA_AddOrDeleteMover
- ~RNA_BulgeEnergy()
: core::scoring::rna::RNA_BulgeEnergy
- ~RNA_ChunkLibrary()
: protocols::rna::RNA_ChunkLibrary
- ~RNA_CS_parameters()
: core::scoring::rna::chemical_shift::RNA_CS_parameters
- ~RNA_CS_residue_parameters()
: core::scoring::rna::chemical_shift::RNA_CS_residue_parameters
- ~RNA_DataReader()
: protocols::rna::RNA_DataReader
- ~RNA_DeleteMover()
: protocols::swa::monte_carlo::RNA_DeleteMover
- ~RNA_DeNovoProtocol()
: protocols::rna::RNA_DeNovoProtocol
- ~RNA_FittedTorsionInfo()
: core::scoring::rna::RNA_FittedTorsionInfo
- ~RNA_FragmentMover()
: protocols::rna::RNA_FragmentMover
- ~RNA_Fragments()
: protocols::rna::RNA_Fragments
- ~RNA_FullAtomVDW_BasePhosphate()
: core::scoring::rna::RNA_FullAtomVDW_BasePhosphate
- ~RNA_IdealCoord()
: protocols::rna::RNA_IdealCoord
- ~RNA_JumpLibrary()
: protocols::rna::RNA_JumpLibrary
- ~RNA_LoopCloseSampler()
: protocols::swa::rna::RNA_LoopCloseSampler
- ~RNA_O2StarMover()
: protocols::swa::monte_carlo::RNA_O2StarMover
- ~RNA_PairingTemplate()
: protocols::rna::RNA_PairingTemplate
- ~RNA_Relaxer()
: protocols::rna::RNA_Relaxer
- ~RNA_ResidueType()
: core::chemical::rna::RNA_ResidueType
- ~RNA_SilentStruct()
: core::io::silent::RNA_SilentStruct
- ~RNA_SilentStructCreator()
: core::io::silent::RNA_SilentStructCreator
- ~RNA_StructureParameters()
: protocols::rna::RNA_StructureParameters
- ~RNA_SugarCloseEnergy()
: core::scoring::rna::RNA_SugarCloseEnergy
- ~RNA_suite_list()
: protocols::rna::RNA_suite_list
- ~RNA_SWA_MonteCarloMover()
: protocols::swa::monte_carlo::RNA_SWA_MonteCarloMover
- ~RNA_TorsionMover()
: protocols::swa::monte_carlo::RNA_TorsionMover
- ~RNA_TorsionPotential()
: core::scoring::rna::RNA_TorsionPotential
- ~RollMover()
: protocols::rigid::RollMover
- ~Rose()
: protocols::sic_dock::Rose
- ~RotamerAssigningAnnealer()
: core::pack::annealer::RotamerAssigningAnnealer
- ~RotamerBoltzmannWeight()
: protocols::simple_filters::RotamerBoltzmannWeight
- ~RotamerBoltzmannWeightFeatures()
: protocols::features::RotamerBoltzmannWeightFeatures
- ~RotamerBoltzmannWeightFeaturesCreator()
: protocols::features::RotamerBoltzmannWeightFeaturesCreator
- ~RotamerBuildingData()
: core::pack::dunbrack::RotamerBuildingData
- ~RotamerConstraint()
: core::pack::dunbrack::RotamerConstraint
- ~RotamerDNAHBondFilter()
: protocols::dna::RotamerDNAHBondFilter
- ~RotamerDots()
: core::pack::interaction_graph::RotamerDots
- ~RotamerDotsCache()
: core::pack::interaction_graph::RotamerDotsCache
- ~RotamerExplosion()
: core::pack::task::operation::RotamerExplosion
- ~RotamerFeatures()
: protocols::features::RotamerFeatures
- ~RotamerFeaturesCreator()
: protocols::features::RotamerFeaturesCreator
- ~RotamericData()
: core::pack::dunbrack::RotamericData< T >
- ~RotamericSingleResidueDunbrackLibrary()
: core::pack::dunbrack::RotamericSingleResidueDunbrackLibrary< T >
- ~RotamerLibrary()
: core::pack::dunbrack::RotamerLibrary
- ~RotamerLibraryScratchSpace()
: core::pack::dunbrack::RotamerLibraryScratchSpace
- ~RotamerOperation()
: core::pack::rotamer_set::RotamerOperation
- ~RotamerRecovery()
: protocols::rotamer_recovery::RotamerRecovery
- ~RotamerRecoveryFactory()
: protocols::rotamer_recovery::RotamerRecoveryFactory
- ~RotamerRecoveryFeatures()
: protocols::features::RotamerRecoveryFeatures
- ~RotamerRecoveryFeaturesCreator()
: protocols::features::RotamerRecoveryFeaturesCreator
- ~RotamerRecoveryMover()
: protocols::rotamer_recovery::RotamerRecoveryMover
- ~RotamerSet()
: core::pack::rotamer_set::RotamerSet
- ~RotamerSet_()
: core::pack::rotamer_set::RotamerSet_
- ~RotamerSetBase()
: core::conformation::RotamerSetBase
- ~RotamerSetFactory()
: core::pack::rotamer_set::RotamerSetFactory
- ~RotamerSetOperation()
: core::pack::rotamer_set::RotamerSetOperation
- ~RotamerSets()
: core::pack::rotamer_set::RotamerSets
- ~RotamerSetsBase()
: core::pack::rotamer_set::RotamerSetsBase
- ~RotamerSubset()
: core::pack::rotamer_set::RotamerSubset
- ~RotamerSubsetRepacker()
: protocols::pack_daemon::RotamerSubsetRepacker
- ~RotamerSubsets()
: core::pack::rotamer_set::RotamerSubsets
- ~RotamerTrialsMinMover()
: protocols::simple_moves::RotamerTrialsMinMover
- ~RotamerTrialsMover()
: protocols::simple_moves::RotamerTrialsMover
- ~RotamerTrie()
: core::scoring::trie::RotamerTrie< AT, CPDATA >
- ~RotamerTrieBase()
: core::scoring::trie::RotamerTrieBase
- ~Rotate()
: protocols::ligand_docking::Rotate
- ~RotateJumpAxisMover()
: protocols::rigid::RotateJumpAxisMover
- ~Rotates()
: protocols::ligand_docking::Rotates
- ~RRComparer()
: protocols::rotamer_recovery::RRComparer
- ~RRComparerAutomorphicRMSD()
: protocols::rotamer_recovery::RRComparerAutomorphicRMSD
- ~RRComparerAutomorphicRMSDCreator()
: protocols::rotamer_recovery::RRComparerAutomorphicRMSDCreator
- ~RRComparerChiDiff()
: protocols::rotamer_recovery::RRComparerChiDiff
- ~RRComparerChiDiffCreator()
: protocols::rotamer_recovery::RRComparerChiDiffCreator
- ~RRComparerCreator()
: protocols::rotamer_recovery::RRComparerCreator
- ~RRComparerRotBins()
: protocols::rotamer_recovery::RRComparerRotBins
- ~RRComparerRotBinsCreator()
: protocols::rotamer_recovery::RRComparerRotBinsCreator
- ~RRProtocol()
: protocols::rotamer_recovery::RRProtocol
- ~RRProtocolCreator()
: protocols::rotamer_recovery::RRProtocolCreator
- ~RRProtocolMinPack()
: protocols::rotamer_recovery::RRProtocolMinPack
- ~RRProtocolMinPackCreator()
: protocols::rotamer_recovery::RRProtocolMinPackCreator
- ~RRProtocolMover()
: protocols::rotamer_recovery::RRProtocolMover
- ~RRProtocolMoverCreator()
: protocols::rotamer_recovery::RRProtocolMoverCreator
- ~RRProtocolPackRotamers()
: protocols::rotamer_recovery::RRProtocolPackRotamers
- ~RRProtocolPackRotamersCreator()
: protocols::rotamer_recovery::RRProtocolPackRotamersCreator
- ~RRProtocolReferenceStructure()
: protocols::rotamer_recovery::RRProtocolReferenceStructure
- ~RRProtocolReferenceStructureCreator()
: protocols::rotamer_recovery::RRProtocolReferenceStructureCreator
- ~RRProtocolRotamerTrials()
: protocols::rotamer_recovery::RRProtocolRotamerTrials
- ~RRProtocolRotamerTrialsCreator()
: protocols::rotamer_recovery::RRProtocolRotamerTrialsCreator
- ~RRProtocolRTMin()
: protocols::rotamer_recovery::RRProtocolRTMin
- ~RRProtocolRTMinCreator()
: protocols::rotamer_recovery::RRProtocolRTMinCreator
- ~RRReporter()
: protocols::rotamer_recovery::RRReporter
- ~RRReporterCreator()
: protocols::rotamer_recovery::RRReporterCreator
- ~RRReporterHuman()
: protocols::rotamer_recovery::RRReporterHuman
- ~RRReporterHumanCreator()
: protocols::rotamer_recovery::RRReporterHumanCreator
- ~RRReporterSimple()
: protocols::rotamer_recovery::RRReporterSimple
- ~RRReporterSimpleCreator()
: protocols::rotamer_recovery::RRReporterSimpleCreator
- ~RRReporterSQLite()
: protocols::rotamer_recovery::RRReporterSQLite
- ~RRReporterSQLiteCreator()
: protocols::rotamer_recovery::RRReporterSQLiteCreator
- ~RTMin()
: core::pack::RTMin
- ~SaltBridgeFeatures()
: protocols::features::SaltBridgeFeatures
- ~SaltBridgeFeaturesCreator()
: protocols::features::SaltBridgeFeaturesCreator
- ~SameChiBinComboGrouper()
: protocols::match::output::SameChiBinComboGrouper
- ~SameRotamerComboGrouper()
: protocols::match::output::SameRotamerComboGrouper
- ~SameSequenceAndDSPositionGrouper()
: protocols::match::output::SameSequenceAndDSPositionGrouper
- ~SameSequenceGrouper()
: protocols::match::output::SameSequenceGrouper
- ~SameStrand()
: protocols::jumping::SameStrand
- ~SampleStrategyData()
: protocols::match::upstream::SampleStrategyData
- ~SaneMinMover()
: protocols::simple_moves::SaneMinMover
- ~SaveAndRetrieveSidechains()
: protocols::protein_interface_design::movers::SaveAndRetrieveSidechains
- ~SavePoseMover()
: protocols::rosetta_scripts::SavePoseMover
- ~SAXSEnergy()
: core::scoring::saxs::SAXSEnergy
- ~SAXSScoreFilter()
: protocols::simple_filters::SAXSScoreFilter
- ~SC_BB_EnergyInvoker()
: core::scoring::etable::SC_BB_EnergyInvoker< Evaluator >
- ~SC_SC_EnergyInvoker()
: core::scoring::etable::SC_SC_EnergyInvoker< Evaluator >
- ~SC_Whole_EnergyInvoker()
: core::scoring::etable::SC_Whole_EnergyInvoker< Evaluator >
- ~ScaffoldBuildPoint()
: protocols::match::upstream::ScaffoldBuildPoint
- ~ScalarWeightedFunc()
: core::scoring::constraints::ScalarWeightedFunc
- ~ScaleAnnealerTemperatureOperation()
: protocols::optimize_weights::ScaleAnnealerTemperatureOperation
- ~SCMinMinimizerMap()
: core::pack::scmin::SCMinMinimizerMap
- ~SCMinMultifunc()
: core::pack::scmin::SCMinMultifunc
- ~ScoreEvaluator()
: protocols::simple_filters::ScoreEvaluator
- ~ScoreFileSilentStruct()
: core::io::silent::ScoreFileSilentStruct
- ~ScoreFileSilentStructCreator()
: core::io::silent::ScoreFileSilentStructCreator
- ~ScoreFunction()
: core::scoring::ScoreFunction
- ~ScoreFunctionFeatures()
: protocols::features::ScoreFunctionFeatures
- ~ScoreFunctionFeaturesCreator()
: protocols::features::ScoreFunctionFeaturesCreator
- ~ScoreFunctionInfo()
: core::scoring::ScoreFunctionInfo
- ~ScoreFunctionLoader()
: protocols::jd2::parser::ScoreFunctionLoader
- ~ScoreLessThanComparator()
: core::import_pose::atom_tree_diffs::ScoreLessThanComparator
- ~ScoreMap()
: protocols::jd2::ScoreMap
- ~ScoreMover()
: protocols::simple_moves::ScoreMover
- ~ScoreStruct()
: core::io::raw_data::ScoreStruct
- ~ScoreTypeFeatures()
: protocols::features::ScoreTypeFeatures
- ~ScoreTypeFeaturesCreator()
: protocols::features::ScoreTypeFeaturesCreator
- ~ScoreTypeFilter()
: protocols::simple_filters::ScoreTypeFilter
- ~ScoringGridLoader()
: protocols::qsar::scoring_grid::ScoringGridLoader
- ~ScoringManager()
: core::scoring::ScoringManager
- ~ScoringScheme()
: core::sequence::ScoringScheme
- ~ScoringSecMatchRPE()
: protocols::match::downstream::ScoringSecMatchRPE
- ~SecMatchResiduePairEvaluator()
: protocols::match::downstream::SecMatchResiduePairEvaluator
- ~SecondaryMatcherToDownstreamResidue()
: protocols::match::downstream::SecondaryMatcherToDownstreamResidue
- ~SecondaryMatcherToUpstreamResidue()
: protocols::match::downstream::SecondaryMatcherToUpstreamResidue
- ~SecondaryMatchProtocol()
: protocols::enzdes::SecondaryMatchProtocol
- ~SecondarySimilarity()
: protocols::frag_picker::scores::SecondarySimilarity
- ~SecondaryStructure()
: core::fragment::SecondaryStructure
- ~SecondaryStructureFilter()
: protocols::fldsgn::filters::SecondaryStructureFilter
- ~SecondaryStructureMPM()
: protocols::match::SecondaryStructureMPM
- ~SecondaryStructurePool()
: protocols::frag_picker::quota::SecondaryStructurePool
- ~SecondaryStructurePotential()
: core::scoring::SecondaryStructurePotential
- ~SecondaryStructureSegmentFeatures()
: protocols::features::SecondaryStructureSegmentFeatures
- ~SecondaryStructureSegmentFeaturesCreator()
: protocols::features::SecondaryStructureSegmentFeaturesCreator
- ~SecondaryStructureWeights()
: core::scoring::SecondaryStructureWeights
- ~SecStructGen()
: core::fragment::picking_old::vall::gen::SecStructGen
- ~SeedFoldTree()
: protocols::seeded_abinitio::SeedFoldTree
- ~SeedSetupMover()
: protocols::seeded_abinitio::SeedSetupMover
- ~SegmentHybridizer()
: protocols::seeded_abinitio::SegmentHybridizer
- ~SegmentInsert()
: protocols::forge::build::SegmentInsert
- ~SegmentRebuild()
: protocols::forge::build::SegmentRebuild
- ~SegmentSwap()
: protocols::forge::build::SegmentSwap
- ~SelectBySASAOperation()
: protocols::toolbox::task_operations::SelectBySASAOperation
- ~SelectedResPredicate()
: core::scoring::SelectedResPredicate
- ~SelectGdtEvaluator()
: protocols::simple_filters::SelectGdtEvaluator
- ~SelectResiduesByLayer()
: protocols::toolbox::SelectResiduesByLayer
- ~SemiRotamericSingleResidueDunbrackLibrary()
: core::pack::dunbrack::SemiRotamericSingleResidueDunbrackLibrary< T >
- ~SeparateDnaFromNonDna()
: protocols::dna::SeparateDnaFromNonDna
- ~SeqprofConsensusOperation()
: protocols::toolbox::task_operations::SeqprofConsensusOperation
- ~Sequence()
: core::sequence::Sequence
- ~SequenceAlignment()
: core::sequence::SequenceAlignment
- ~SequenceCoupling()
: core::sequence::SequenceCoupling
- ~SequenceCoupling1BDConstraint()
: protocols::constraints_additional::SequenceCoupling1BDConstraint
- ~SequenceCoupling1BDConstraintCreator()
: protocols::constraints_additional::SequenceCoupling1BDConstraintCreator
- ~SequenceCouplingConstraint()
: protocols::constraints_additional::SequenceCouplingConstraint
- ~SequenceCouplingConstraintCreator()
: protocols::constraints_additional::SequenceCouplingConstraintCreator
- ~SequenceCouplingCreator()
: core::sequence::SequenceCouplingCreator
- ~SequenceCreator()
: core::sequence::SequenceCreator
- ~SequenceDependentRefEnergy()
: core::scoring::methods::SequenceDependentRefEnergy
- ~SequenceMapping()
: core::id::SequenceMapping
- ~SequenceProfile()
: core::sequence::SequenceProfile
- ~SequenceProfileConstraint()
: core::scoring::constraints::SequenceProfileConstraint
- ~SequenceProfileConstraintCreator()
: core::scoring::constraints::SequenceProfileConstraintCreator
- ~SequenceProfileCreator()
: core::sequence::SequenceProfileCreator
- ~SequenceProfileMover()
: protocols::simple_moves::SequenceProfileMover
- ~SequenceRecoveryFilter()
: protocols::protein_interface_design::filters::SequenceRecoveryFilter
- ~SetAACompositionPotential()
: protocols::fldsgn::potentials::SetAACompositionPotential
- ~SetAtomTree()
: protocols::protein_interface_design::movers::SetAtomTree
- ~SetCatalyticResPackBehavior()
: protocols::enzdes::SetCatalyticResPackBehavior
- ~SetChiMover()
: protocols::simple_moves::sidechain_moves::SetChiMover
- ~SetIGTypeOperation()
: protocols::toolbox::task_operations::SetIGTypeOperation
- ~SetRotamerCouplings()
: core::pack::task::operation::SetRotamerCouplings
- ~SetRotamerLinks()
: core::pack::task::operation::SetRotamerLinks
- ~SetSecStructEnergies()
: protocols::fldsgn::potentials::SetSecStructEnergies
- ~SetTemperatureFactor()
: protocols::protein_interface_design::movers::SetTemperatureFactor
- ~SetTorsion()
: protocols::simple_moves::SetTorsion
- ~SetupForFibrilMover()
: protocols::fibril::SetupForFibrilMover
- ~SetupForSymmetryMover()
: protocols::simple_moves::symmetry::SetupForSymmetryMover
- ~SetupHotspotConstraintsLoopsMover()
: protocols::protein_interface_design::movers::SetupHotspotConstraintsLoopsMover
- ~SetupHotspotConstraintsMover()
: protocols::protein_interface_design::movers::SetupHotspotConstraintsMover
- ~SetupNCSMover()
: protocols::simple_moves::symmetry::SetupNCSMover
- ~SetupPoissonBoltzmannPotential()
: protocols::pb_potential::SetupPoissonBoltzmannPotential
- ~SetupPoissonBoltzmannPotentialCreator()
: protocols::pb_potential::SetupPoissonBoltzmannPotentialCreator
- ~SF_Replica()
: protocols::toolbox::SF_Replica
- ~SG_Dist_Func()
: core::scoring::disulfides::SG_Dist_Func
- ~SGSG_Dihedral_Func()
: core::scoring::disulfides::SGSG_Dihedral_Func
- ~ShakeStructureMover()
: protocols::simple_moves::ShakeStructureMover
- ~ShapeComplementarityCalculator()
: core::scoring::sc::ShapeComplementarityCalculator
- ~ShapeComplementarityFilter()
: protocols::simple_filters::ShapeComplementarityFilter
- ~ShearMinCCDTrial()
: protocols::loops::loop_mover::refine::ShearMinCCDTrial
- ~ShearMinCCDTrialCreator()
: protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator
- ~ShearMover()
: protocols::simple_moves::ShearMover
- ~Sheet()
: protocols::fldsgn::topology::Sheet
- ~SheetBuilder()
: protocols::jumping::SheetBuilder
- ~SheetConstraintsRCG()
: protocols::fldsgn::SheetConstraintsRCG
- ~SheetFilter()
: protocols::simple_filters::SheetFilter
- ~SheetSet()
: protocols::fldsgn::topology::SheetSet
- ~SheetTopologyFilter()
: protocols::fldsgn::filters::SheetTopologyFilter
- ~ShortestPathInFoldTree()
: core::kinematics::ShortestPathInFoldTree
- ~ShortRangeTwoBodyEnergy()
: core::scoring::methods::ShortRangeTwoBodyEnergy
- ~ShuffleFileSystemJobDistributor()
: protocols::jd2::ShuffleFileSystemJobDistributor
- ~SICFast()
: protocols::sic_dock::SICFast
- ~SidechainContactDistCutoff()
: protocols::frag_picker::SidechainContactDistCutoff
- ~SidechainMCMover()
: protocols::simple_moves::sidechain_moves::SidechainMCMover
- ~SidechainMetropolisHastingsMover()
: protocols::canonical_sampling::SidechainMetropolisHastingsMover
- ~SidechainMinMover()
: protocols::docking::SidechainMinMover
- ~SidechainMover()
: protocols::simple_moves::sidechain_moves::SidechainMover
- ~SidechainMoverBase()
: protocols::simple_moves::sidechain_moves::SidechainMoverBase
- ~SidechainRmsdFilter()
: protocols::simple_filters::SidechainRmsdFilter
- ~Sigmoid()
: protocols::simple_filters::Sigmoid
- ~SilentFileData()
: core::io::silent::SilentFileData
- ~SilentFileInputter()
: protocols::inputter::SilentFileInputter
- ~SilentFileJobInputter()
: protocols::jd2::SilentFileJobInputter
- ~SilentFileJobOutputter()
: protocols::jd2::SilentFileJobOutputter
- ~SilentFileLoader()
: core::io::silent::SilentFileLoader
- ~SilentFileLoaderCreator()
: core::io::silent::SilentFileLoaderCreator
- ~SilentFileOptions()
: core::io::silent::SilentFileOptions
- ~SilentFileOptionsCreator()
: core::io::silent::SilentFileOptionsCreator
- ~SilentFileOutputter()
: protocols::outputter::SilentFileOutputter
- ~SilentFilePoseInputStream()
: core::import_pose::pose_stream::SilentFilePoseInputStream
- ~SilentObserver()
: protocols::viewer::SilentObserver
- ~SilentStruct()
: core::io::silent::SilentStruct
- ~SilentStructCreator()
: core::io::silent::SilentStructCreator
- ~SilentStructStore()
: protocols::wum::SilentStructStore
- ~SillyCountStruct()
: protocols::swa::rna::SillyCountStruct
- ~SimAnnealerBase()
: core::pack::annealer::SimAnnealerBase
- ~SimpleDerivCheckResult()
: core::optimization::SimpleDerivCheckResult
- ~SimpleEdge()
: core::pack::interaction_graph::SimpleEdge
- ~SimpleInteractionGraph()
: core::pack::interaction_graph::SimpleInteractionGraph
- ~SimpleNode()
: core::pack::interaction_graph::SimpleNode
- ~SimplePDB()
: core::scoring::packstat::SimplePDB
- ~SimplePDB_Atom()
: core::scoring::packstat::SimplePDB_Atom
- ~SimpleScoringScheme()
: core::sequence::SimpleScoringScheme
- ~SimpleSequenceCreator()
: core::sequence::SimpleSequenceCreator
- ~SingleDownstreamResidueWriter()
: protocols::match::output::SingleDownstreamResidueWriter
- ~SingleFileBuffer()
: protocols::jd2::SingleFileBuffer
- ~SingleFragmentMover()
: protocols::nonlocal::SingleFragmentMover
- ~SingleGrid()
: protocols::qsar::scoring_grid::SingleGrid
- ~SingleLigandRotamerLibrary()
: core::pack::dunbrack::SingleLigandRotamerLibrary
- ~SingleResidueDunbrackLibrary()
: core::pack::dunbrack::SingleResidueDunbrackLibrary
- ~SingleResidueFragData()
: core::fragment::SingleResidueFragData
- ~SingleResidueInvrotTarget()
: protocols::toolbox::match_enzdes_util::SingleResidueInvrotTarget
- ~SingleResidueMultifunc()
: core::optimization::SingleResidueMultifunc
- ~SingleResidueRotamerLibrary()
: core::pack::dunbrack::SingleResidueRotamerLibrary
- ~SingleResidueTorsionFragmentLibrary()
: protocols::frags::SingleResidueTorsionFragmentLibrary
- ~SingleState()
: protocols::multistate_design::SingleState
- ~SingleStateEntityData()
: protocols::multistate_design::SingleStateEntityData
- ~SingleStateFitnessFunction()
: protocols::multistate_design::SingleStateFitnessFunction
- ~SingleStructureData()
: protocols::optimize_weights::SingleStructureData
- ~SiteConstraintCreator()
: core::scoring::constraints::SiteConstraintCreator
- ~SiteConstraintResiduesCreator()
: core::scoring::constraints::SiteConstraintResiduesCreator
- ~SkipViolFunc()
: core::scoring::constraints::SkipViolFunc
- ~Slice()
: core::scoring::packstat::Slice
- ~SlicedPoseJobParameters()
: protocols::swa::rna::SlicedPoseJobParameters
- ~SlideIntoSurface()
: protocols::surface_docking::SlideIntoSurface
- ~SlideTogether()
: protocols::ligand_docking::SlideTogether
- ~SlidingWindowLoopClosure()
: protocols::loops::loop_closure::ccd::SlidingWindowLoopClosure
- ~SmallMinCCDTrial()
: protocols::loops::loop_mover::refine::SmallMinCCDTrial
- ~SmallMinCCDTrialCreator()
: protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator
- ~SmallMover()
: protocols::simple_moves::SmallMover
- ~SmoothFragmentMover()
: protocols::simple_moves::SmoothFragmentMover
- ~SmotifFeatures()
: protocols::features::SmotifFeatures
- ~SmotifFeaturesCreator()
: protocols::features::SmotifFeaturesCreator
- ~SnugDock()
: protocols::antibody2::SnugDock
- ~SnugDockProtocol()
: protocols::antibody2::SnugDockProtocol
- ~SOGFunc_Impl()
: core::scoring::constraints::SOGFunc_Impl
- ~SolvationGrid()
: protocols::qsar::scoring_grid::SolvationGrid
- ~SolvationMetaGrid()
: protocols::qsar::scoring_grid::SolvationMetaGrid
- ~SolventAccessibility()
: protocols::frag_picker::scores::SolventAccessibility
- ~SourcePositions()
: protocols::coarse_rna::SourcePositions
- ~Sparta()
: protocols::sparta::Sparta
- ~SpecialRotamerRSO()
: protocols::toolbox::rotamer_set_operations::SpecialRotamerRSO
- ~SpecialSegmentsObserver()
: core::pose::datacache::SpecialSegmentsObserver
- ~SpecificResiduesNearInterfaceFilter()
: protocols::protein_interface_design::filters::SpecificResiduesNearInterfaceFilter
- ~Spin()
: protocols::noesy_assign::CrossPeak::Spin
- ~SpinMover()
: protocols::protein_interface_design::movers::SpinMover
- ~Splice()
: protocols::protein_interface_design::movers::Splice
- ~SpliceSegment()
: protocols::protein_interface_design::movers::SpliceSegment
- ~SplineFunc()
: core::scoring::constraints::SplineFunc
- ~SS_Base()
: protocols::fldsgn::topology::SS_Base
- ~SS_Info2()
: protocols::fldsgn::topology::SS_Info2
- ~SSPairPotential()
: protocols::fldsgn::potentials::sspot::SSPairPotential
- ~StartFrom()
: protocols::ligand_docking::StartFrom
- ~StateAccumulatingMatchFilter()
: protocols::match::output::StateAccumulatingMatchFilter
- ~StepWiseClusterer()
: protocols::swa::StepWiseClusterer
- ~StepWiseFilterer()
: protocols::swa::StepWiseFilterer
- ~StepWiseJobParameters()
: protocols::swa::StepWiseJobParameters
- ~StepWisePoseSampleGenerator()
: protocols::swa::StepWisePoseSampleGenerator
- ~StepWisePoseSetup()
: protocols::swa::StepWisePoseSetup
- ~StepWiseProteinCCD_Closer()
: protocols::swa::protein::StepWiseProteinCCD_Closer
- ~StepWiseProteinFilterer()
: protocols::swa::protein::StepWiseProteinFilterer
- ~StepWiseProteinLoopBridger()
: protocols::swa::protein::StepWiseProteinLoopBridger
- ~StepWiseProteinPacker()
: protocols::swa::protein::StepWiseProteinPacker
- ~StepWiseProteinPoseMinimizer()
: protocols::swa::protein::StepWiseProteinPoseMinimizer
- ~StepWiseProteinPoseSetup()
: protocols::swa::protein::StepWiseProteinPoseSetup
- ~StepWiseProteinResidueSampler()
: protocols::swa::protein::StepWiseProteinResidueSampler
- ~StepWiseProteinScreener()
: protocols::swa::protein::StepWiseProteinScreener
- ~StepWiseResidueSampler()
: protocols::swa::StepWiseResidueSampler
- ~StepWiseRNA_AnalyticalLoopCloseSampler()
: protocols::swa::rna::StepWiseRNA_AnalyticalLoopCloseSampler
- ~StepWiseRNA_Base_Sugar_Rotamer()
: protocols::swa::rna::StepWiseRNA_Base_Sugar_Rotamer
- ~StepWiseRNA_BaseCentroidScreener()
: protocols::swa::rna::StepWiseRNA_BaseCentroidScreener
- ~StepWiseRNA_Clusterer()
: protocols::swa::rna::StepWiseRNA_Clusterer
- ~StepWiseRNA_CombineLongLoopFilterer()
: protocols::swa::rna::StepWiseRNA_CombineLongLoopFilterer
- ~StepWiseRNA_JobParameters()
: protocols::swa::rna::StepWiseRNA_JobParameters
- ~StepWiseRNA_JobParameters_Setup()
: protocols::swa::rna::StepWiseRNA_JobParameters_Setup
- ~StepWiseRNA_Minimizer()
: protocols::swa::rna::StepWiseRNA_Minimizer
- ~StepWiseRNA_PoseSetup()
: protocols::swa::rna::StepWiseRNA_PoseSetup
- ~StepWiseRNA_ResidueSampler()
: protocols::swa::rna::StepWiseRNA_ResidueSampler
- ~StepWiseRNA_RotamerGenerator()
: protocols::swa::rna::StepWiseRNA_RotamerGenerator
- ~StepWiseRNA_RotamerGenerator_Wrapper()
: protocols::swa::rna::StepWiseRNA_RotamerGenerator_Wrapper
- ~StepWiseRNA_VDW_Bin_Screener()
: protocols::swa::rna::StepWiseRNA_VDW_Bin_Screener
- ~StepWiseScreener()
: protocols::swa::StepWiseScreener
- ~StochasticFilter()
: protocols::filters::StochasticFilter
- ~Strand()
: protocols::fldsgn::topology::Strand
- ~StrandBundleFeaturesCreator()
: protocols::features::strand_assembly::StrandBundleFeaturesCreator
- ~StrandConstraints()
: protocols::abinitio::StrandConstraints
- ~StrandFragment()
: protocols::features::strand_assembly::StrandFragment
- ~StrandPairing()
: core::scoring::dssp::StrandPairing
, protocols::fldsgn::topology::StrandPairing
- ~StrandPairingSet()
: protocols::fldsgn::topology::StrandPairingSet
, core::scoring::dssp::StrandPairingSet
- ~Strands()
: core::scoring::Strands
- ~StructuralSimilarityEvaluator()
: protocols::simple_filters::StructuralSimilarityEvaluator
- ~StructureFeatures()
: protocols::features::StructureFeatures
- ~StructureFeaturesCreator()
: protocols::features::StructureFeaturesCreator
- ~StructureRestrictor()
: protocols::moves::StructureRestrictor
- ~StructureScoresFeatures()
: protocols::features::StructureScoresFeatures
- ~StructureScoresFeaturesCreator()
: protocols::features::StructureScoresFeaturesCreator
- ~StructureSimilarityEvaluatorCreator()
: protocols::simple_filters::StructureSimilarityEvaluatorCreator
- ~StubScoreFilter()
: protocols::protein_interface_design::filters::StubScoreFilter
- ~StubScoreLoopsFilter()
: protocols::protein_interface_design::filters::StubScoreLoopsFilter
- ~SubroutineMover()
: protocols::protein_interface_design::movers::SubroutineMover
- ~SuckerEnergy()
: core::scoring::methods::SuckerEnergy
- ~SuggestValueMessage()
: protocols::topology_broker::SuggestValueMessage
- ~SuperimposeMover()
: protocols::simple_moves::SuperimposeMover
- ~SurfaceBackgroundEdge()
: core::pack::interaction_graph::SurfaceBackgroundEdge< V, E, G >
- ~SurfaceBackgroundNode()
: core::pack::interaction_graph::SurfaceBackgroundNode< V, E, G >
- ~SurfaceCalculator()
: protocols::toolbox::pose_metric_calculators::SurfaceCalculator
- ~SurfaceDockingProtocol()
: protocols::surface_docking::SurfaceDockingProtocol
- ~SurfaceEdge()
: core::pack::interaction_graph::SurfaceEdge< V, E, G >
- ~SurfaceEnergies()
: core::scoring::solid_surface::SurfaceEnergies
- ~SurfaceInteractionGraph()
: core::pack::interaction_graph::SurfaceInteractionGraph< V, E, G >
- ~SurfaceNode()
: core::pack::interaction_graph::SurfaceNode< V, E, G >
- ~SurfaceOrientMover()
: protocols::surface_docking::SurfaceOrientMover
- ~SWAligner()
: core::sequence::SWAligner
- ~SwapSegment()
: protocols::seeded_abinitio::SwapSegment
- ~SymAtomTreeMultifunc()
: core::optimization::symmetry::SymAtomTreeMultifunc
- ~SymDockBaseProtocol()
: protocols::symmetric_docking::SymDockBaseProtocol
- ~SymDockingHiRes()
: protocols::symmetric_docking::SymDockingHiRes
- ~SymDockingInitialPerturbation()
: protocols::simple_moves::symmetry::SymDockingInitialPerturbation
- ~SymDockingLowRes()
: protocols::symmetric_docking::SymDockingLowRes
- ~SymDockingSlideIntoContact()
: protocols::simple_moves::symmetry::SymDockingSlideIntoContact
- ~SymDockProtocol()
: protocols::symmetric_docking::SymDockProtocol
- ~SymDof()
: core::conformation::symmetry::SymDof
- ~SymEnergyCutRotamerTrialsMover()
: protocols::simple_moves::symmetry::SymEnergyCutRotamerTrialsMover
- ~SymFoldandDockMoveRbJumpMover()
: protocols::symmetric_docking::SymFoldandDockMoveRbJumpMover
- ~SymFoldandDockRbTrialMover()
: protocols::symmetric_docking::SymFoldandDockRbTrialMover
- ~SymFoldandDockSlideTrialMover()
: protocols::symmetric_docking::SymFoldandDockSlideTrialMover
- ~SymInterfaceSidechainMinMover()
: protocols::symmetric_docking::SymInterfaceSidechainMinMover
- ~SymmData()
: core::conformation::symmetry::SymmData
- ~SymmDataLoader()
: core::conformation::symmetry::SymmDataLoader
- ~SymmDataOptions()
: core::conformation::symmetry::SymmDataOptions
- ~SymmDataOptionsCreator()
: core::conformation::symmetry::SymmDataOptionsCreator
- ~SymmetricConformation()
: core::conformation::symmetry::SymmetricConformation
- ~SymmetricEnergies()
: core::scoring::symmetry::SymmetricEnergies
- ~SymmetricLigandEnergy()
: core::scoring::methods::SymmetricLigandEnergy
- ~SymmetricMotifFilter()
: protocols::simple_filters::SymmetricMotifFilter
- ~SymmetricRmsdEvaluator()
: protocols::simple_filters::SymmetricRmsdEvaluator
- ~SymmetricRMSMover()
: protocols::simple_moves::symmetry::SymmetricRMSMover
- ~SymmetricRotamerSet_()
: core::pack::rotamer_set::symmetry::SymmetricRotamerSet_
- ~SymmetricRotamerSets()
: core::pack::rotamer_set::symmetry::SymmetricRotamerSets
- ~SymmetryInfo()
: core::conformation::symmetry::SymmetryInfo
- ~SymmetrySlider()
: protocols::simple_moves::symmetry::SymmetrySlider
- ~SymMinimizerMap()
: core::optimization::symmetry::SymMinimizerMap
- ~SymMinMover()
: protocols::simple_moves::symmetry::SymMinMover
- ~SymmLinearMemEdge()
: core::pack::interaction_graph::SymmLinearMemEdge
- ~SymmLinearMemNode()
: core::pack::interaction_graph::SymmLinearMemNode
- ~SymmLinearMemoryInteractionGraph()
: core::pack::interaction_graph::SymmLinearMemoryInteractionGraph
- ~SymmMinimalistEdge()
: core::pack::interaction_graph::SymmMinimalistEdge
- ~SymmMinimalistInteractionGraph()
: core::pack::interaction_graph::SymmMinimalistInteractionGraph
- ~SymmMinimalistNode()
: core::pack::interaction_graph::SymmMinimalistNode
- ~SymmOnTheFlyEdge()
: core::pack::interaction_graph::SymmOnTheFlyEdge
- ~SymmOnTheFlyInteractionGraph()
: core::pack::interaction_graph::SymmOnTheFlyInteractionGraph
- ~SymmOnTheFlyNode()
: core::pack::interaction_graph::SymmOnTheFlyNode
- ~SymPackRotamersMover()
: protocols::simple_moves::symmetry::SymPackRotamersMover
- ~SymRestrictTaskForDocking()
: protocols::symmetric_docking::SymRestrictTaskForDocking
- ~SymRotamerTrialsMover()
: protocols::simple_moves::symmetry::SymRotamerTrialsMover
- ~SymShakeStructureMover()
: protocols::simple_moves::symmetry::SymShakeStructureMover
- ~SymSidechainMinMover()
: protocols::symmetric_docking::SymSidechainMinMover
- ~SymSlideInfo()
: core::conformation::symmetry::SymSlideInfo
- ~TableLookupEvaluator()
: core::scoring::etable::TableLookupEvaluator
- ~TabooSamplingKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::TabooSamplingKinematicPerturber
- ~TalosSSSimilarity()
: protocols::frag_picker::scores::TalosSSSimilarity
- ~TargetRotamerCoords()
: protocols::match::downstream::TargetRotamerCoords
- ~TaskAwareCsts()
: protocols::protein_interface_design::movers::TaskAwareCsts
- ~TaskAwareMinMover()
: protocols::simple_moves::TaskAwareMinMover
- ~TaskFactory()
: core::pack::task::TaskFactory
- ~TaskOperation()
: core::pack::task::operation::TaskOperation
- ~TaskOperationCreator()
: core::pack::task::operation::TaskOperationCreator
- ~TaskOperationFactory()
: core::pack::task::operation::TaskOperationFactory
- ~TaskOperationLoader()
: protocols::jd2::parser::TaskOperationLoader
- ~TaskOperationMPM()
: protocols::match::TaskOperationMPM
- ~Template()
: protocols::abinitio::Template
- ~TemplateJumpSetup()
: protocols::abinitio::TemplateJumpSetup
- ~Templates()
: protocols::abinitio::Templates
- ~TenANeighborEdge()
: core::scoring::TenANeighborEdge
- ~TenANeighborGraph()
: core::scoring::TenANeighborGraph
- ~TenANeighborNode()
: core::scoring::TenANeighborNode
- ~TensorsOptimizer()
: protocols::scoring::methods::pcs::TensorsOptimizer
, protocols::scoring::methods::pcs2::TensorsOptimizer
- ~TensorsOptimizerFix()
: protocols::scoring::methods::pcs2::TensorsOptimizerFix
- ~TensorsOptimizerSvd()
: protocols::scoring::methods::pcs2::TensorsOptimizerSvd
- ~TerminusDistanceFilter()
: protocols::simple_filters::TerminusDistanceFilter
- ~TetherLigand()
: protocols::ligand_docking::TetherLigand
- ~TheozymeInvrotTree()
: protocols::toolbox::match_enzdes_util::TheozymeInvrotTree
- ~ThermodynamicMover()
: protocols::canonical_sampling::ThermodynamicMover
- ~ThermodynamicObserver()
: protocols::canonical_sampling::ThermodynamicObserver
- ~ThreadingMover()
: protocols::comparative_modeling::ThreadingMover
- ~ThreadSequenceOperation()
: protocols::toolbox::task_operations::ThreadSequenceOperation
- ~TimeFilter()
: protocols::filters::TimeFilter
- ~TopCountOfAllInputs()
: protocols::features::TopCountOfAllInputs
- ~TopCountOfEachInput()
: protocols::features::TopCountOfEachInput
- ~TopologyBroker()
: protocols::topology_broker::TopologyBroker
- ~TopologyClaimer()
: protocols::topology_broker::TopologyClaimer
- ~TopologyClaimerFactory()
: protocols::topology_broker::TopologyClaimerFactory
- ~TopPercentOfAllInputs()
: protocols::features::TopPercentOfAllInputs
- ~TopPercentOfEachInput()
: protocols::features::TopPercentOfEachInput
- ~Torsion()
: protocols::protein_interface_design::filters::Torsion
- ~TorsionBinPool()
: protocols::frag_picker::quota::TorsionBinPool
- ~TorsionDOFMover()
: protocols::simple_moves::TorsionDOFMover
- ~TorsionFragment()
: protocols::frags::TorsionFragment
- ~TorsionFragmentLibrary()
: protocols::frags::TorsionFragmentLibrary
- ~TorsionRestrictedKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::TorsionRestrictedKinematicPerturber
- ~TorsionSamplingKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber
- ~TorsionSweepingKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::TorsionSweepingKinematicPerturber
- ~TrajectoryRecorder()
: protocols::canonical_sampling::TrajectoryRecorder
- ~TransferBuffer()
: protocols::canonical_sampling::mc_convergence_checks::TransferBuffer
- ~Transform()
: protocols::ligand_docking::Transform
- ~Translate()
: protocols::ligand_docking::Translate
- ~TrialCounterObserver()
: protocols::canonical_sampling::TrialCounterObserver
- ~TrialMover()
: protocols::moves::TrialMover
- ~triangleIterator()
: protocols::viewer::triangleIterator
- ~TrieCountPairAll()
: core::scoring::etable::etrie::TrieCountPairAll
- ~TrieCountPairBase()
: core::scoring::trie::TrieCountPairBase
- ~TrieNode()
: core::scoring::trie::TrieNode< AT, CPDATA >
- ~TruncatedScoreEvaluator()
: protocols::simple_filters::TruncatedScoreEvaluator
- ~TryRotamers()
: protocols::protein_interface_design::movers::TryRotamers
- ~TwelveANeighborEdge()
: core::scoring::TwelveANeighborEdge
- ~TwelveANeighborGraph()
: core::scoring::TwelveANeighborGraph
- ~TwelveANeighborNode()
: core::scoring::TwelveANeighborNode
- ~TwoBodyEnergy()
: core::scoring::methods::TwoBodyEnergy
- ~ubi_e2c_modeler()
: protocols::ub_e2c::ubi_e2c_modeler
- ~UDPSocketClient()
: protocols::moves::UDPSocketClient
- ~UEEdge()
: core::graph::UEEdge< V, E >
- ~UEVertex()
: core::graph::UEVertex< V, E >
- ~UnboundRotamersOperation()
: core::pack::rotamer_set::UnboundRotamersOperation
- ~UnconstrainedTorsionsMover()
: protocols::ligand_docking::UnconstrainedTorsionsMover
- ~UnfoldedStateEnergy()
: core::scoring::methods::UnfoldedStateEnergy
- ~UnfoldedStateEnergyCalculatorJobDistributor()
: protocols::unfolded_state_energy_calculator::UnfoldedStateEnergyCalculatorJobDistributor
- ~UnfoldedStateEnergyCalculatorMover()
: protocols::unfolded_state_energy_calculator::UnfoldedStateEnergyCalculatorMover
- ~UnfoldedStateEnergyCalculatorMPIWorkPoolJobDistributor()
: protocols::unfolded_state_energy_calculator::UnfoldedStateEnergyCalculatorMPIWorkPoolJobDistributor
- ~UnfoldedStatePotential()
: core::scoring::UnfoldedStatePotential
- ~UniformSphereTransMover()
: protocols::rigid::UniformSphereTransMover
- ~unordered_object_pool()
: boost::unordered_object_pool< T, UserAllocator >
- ~UnrecognizedAtomFeatures()
: protocols::features::UnrecognizedAtomFeatures
- ~UnrecognizedAtomFeaturesCreator()
: protocols::features::UnrecognizedAtomFeaturesCreator
- ~UpperEdgeGraph()
: core::graph::UpperEdgeGraph< V, E >
- ~UpstreamBuilder()
: protocols::match::upstream::UpstreamBuilder
- ~UpstreamCollisionFilter()
: protocols::match::output::UpstreamCollisionFilter
- ~UpstreamDownstreamCollisionFilter()
: protocols::match::output::UpstreamDownstreamCollisionFilter
- ~UpstreamHitCacher()
: protocols::match::output::UpstreamHitCacher
- ~UpstreamResidueProcessor()
: protocols::match::upstream::UpstreamResidueProcessor
- ~UpstreamResTypeGeometry()
: protocols::match::upstream::UpstreamResTypeGeometry
- ~UserDefinedGroupDiscriminator()
: protocols::simple_moves::UserDefinedGroupDiscriminator
- ~USOGFunc()
: core::scoring::constraints::USOGFunc
- ~VallChunk()
: protocols::frag_picker::VallChunk
- ~VallChunkFilter()
: protocols::frag_picker::VallChunkFilter
- ~VallFragmentEval()
: core::fragment::picking_old::vall::eval::VallFragmentEval
- ~VallFragmentGen()
: core::fragment::picking_old::vall::gen::VallFragmentGen
- ~VallFragmentScore()
: core::fragment::picking_old::vall::scores::VallFragmentScore
- ~VallLibrarian()
: core::fragment::picking_old::vall::VallLibrarian
- ~VallProvider()
: protocols::frag_picker::VallProvider
- ~VallResidue()
: core::fragment::picking_old::vall::VallResidue
, protocols::frag_picker::VallResidue
- ~ValueEvaluator()
: protocols::enzdes::ValueEvaluator
- ~VariableVectorExpression()
: protocols::pack_daemon::VariableVectorExpression
- ~VarLengthBuild()
: protocols::forge::components::VarLengthBuild
- ~VDW_RepScreeninfo()
: protocols::swa::rna::VDW_RepScreeninfo
- ~VdwGrid()
: protocols::qsar::scoring_grid::VdwGrid
- ~VectorExpression()
: protocols::pack_daemon::VectorExpression
- ~VectorExpressionCreator()
: protocols::pack_daemon::VectorExpressionCreator
- ~VectorFunction()
: protocols::pack_daemon::VectorFunction
- ~VectorFunction2()
: protocols::pack_daemon::VectorFunction2
- ~VicinitySamplingKinematicPerturber()
: protocols::loops::loop_closure::kinematic_closure::VicinitySamplingKinematicPerturber
- ~VIP_Mover()
: protocols::vip::VIP_Mover
- ~VIP_Report()
: protocols::vip::VIP_Report
- ~VirtualCoordinate()
: core::conformation::symmetry::VirtualCoordinate
- ~VirtualCoordinates()
: core::conformation::symmetry::VirtualCoordinates
- ~VLB()
: protocols::protein_interface_design::movers::VLB
- ~VMax()
: protocols::pack_daemon::VMax
- ~VMaxBy()
: protocols::pack_daemon::VMaxBy
- ~VMin()
: protocols::pack_daemon::VMin
- ~VMinBy()
: protocols::pack_daemon::VMinBy
- ~WaterAdductHBondPotential()
: core::scoring::WaterAdductHBondPotential
- ~WaterAnchorInfo()
: core::pack::rotamer_set::WaterAnchorInfo
- ~WatsonCrickRotamerCouplings()
: protocols::dna::WatsonCrickRotamerCouplings
- ~WhileMover()
: protocols::moves::WhileMover
- ~WholeStructureEnergy()
: core::scoring::methods::WholeStructureEnergy
- ~WholeWholeEnergyInvoker()
: core::scoring::etable::WholeWholeEnergyInvoker< Evaluator >
- ~WobbleMover()
: protocols::simple_moves::WobbleMover
- ~WorkingRemodelSet()
: protocols::forge::remodel::WorkingRemodelSet
- ~WorkUnit()
: protocols::wum2::WorkUnit
- ~WorkUnit_BatchRelax()
: protocols::relax::WorkUnit_BatchRelax
- ~WorkUnit_BatchRelax_and_PostRescore()
: protocols::relax::WorkUnit_BatchRelax_and_PostRescore
- ~WorkUnit_ElScripts()
: protocols::wum2::WorkUnit_ElScripts
- ~WorkUnit_MoverWrapper()
: protocols::wum::WorkUnit_MoverWrapper
- ~WorkUnit_SilentStructStore()
: protocols::wum::WorkUnit_SilentStructStore
- ~WorkUnit_Wait()
: protocols::wum2::WorkUnit_Wait
, protocols::wum::WorkUnit_Wait
- ~WorkUnitBase()
: protocols::wum::WorkUnitBase
- ~WorkUnitManager()
: protocols::wum::WorkUnitManager
- ~WorkUnitQueue()
: protocols::wum::WorkUnitQueue
- ~WorkUnitQueue_Swapped()
: protocols::wum::WorkUnitQueue_Swapped
- ~WrappedOptEExpressionCreator()
: protocols::optimize_weights::WrappedOptEExpressionCreator
- ~WrapperOptEMultifunc()
: protocols::optimize_weights::WrapperOptEMultifunc
- ~WriteFileSFB()
: protocols::jd2::WriteFileSFB
- ~WriteKinemageOutputter()
: protocols::match::output::WriteKinemageOutputter
- ~WriteUpstreamCoordinateKinemage()
: protocols::match::output::WriteUpstreamCoordinateKinemage
- ~WriteUpstreamHitKinemage()
: protocols::match::output::WriteUpstreamHitKinemage
- ~WUQueue()
: protocols::wum2::WUQueue
- ~XYZ_Func()
: core::scoring::constraints::XYZ_Func
- ~XYZEvent()
: core::conformation::signals::XYZEvent